RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 NISCHQ9Y2I1 1504 aa40.83■■■■■ 4.13
PUDP-203ENST00000424830 ABCC9O60706 1549 aa37.06■■■■□ 3.52
PUDP-203ENST00000424830 CCDC180Q9P1Z9 1646 aa36.83■■■■□ 3.49
PUDP-203ENST00000424830 RB1CC1Q8TDY2 1594 aa35.19■■■■□ 3.22
PUDP-203ENST00000424830 DNAJC5BQ9UF47 199 aa34.94■■■■□ 3.18
PUDP-203ENST00000424830 NACADO15069 1562 aa34.87■■■■□ 3.17
PUDP-203ENST00000424830 DCAF8L2P0C7V8 631 aa34.59■■■■□ 3.13
PUDP-203ENST00000424830 PABPN1Q86U42 306 aaKnown RBP eCLIP34.43■■■■□ 3.1
PUDP-203ENST00000424830 UNC13AQ9UPW8 1703 aa34.37■■■■□ 3.09
PUDP-203ENST00000424830 MYO15BQ96JP2 1530 aa34.29■■■■□ 3.08
PUDP-203ENST00000424830 BICRAQ9NZM4 1560 aa34.11■■■■□ 3.05
PUDP-203ENST00000424830 ZCCHC6Q5VYS8 1495 aaKnown RBP33.79■■■■□ 3
PUDP-203ENST00000424830 DCAF1Q9Y4B6 1507 aa33.73■■■□□ 2.99
PUDP-203ENST00000424830 SHROOM4Q9ULL8 1493 aa33.71■■■□□ 2.99
PUDP-203ENST00000424830 SCRIBQ14160 1630 aa33.51■■■□□ 2.96
PUDP-203ENST00000424830 CC2D2AQ9P2K1 1620 aa33.48■■■□□ 2.95
PUDP-203ENST00000424830 CECR2Q9BXF3 1484 aa33.44■■■□□ 2.94
PUDP-203ENST00000424830 EIF4G1Q04637 1599 aaKnown RBP33.34■■■□□ 2.93
PUDP-203ENST00000424830 DNAJC5Q9H3Z4 198 aa32.36■■■□□ 2.77
PUDP-203ENST00000424830 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
PUDP-203ENST00000424830 CUX2O14529 1486 aa32.1■■■□□ 2.73
PUDP-203ENST00000424830 ERCC6Q03468 1493 aa32.07■■■□□ 2.73
PUDP-203ENST00000424830 ATAD2BQ9ULI0 1458 aa32.02■■■□□ 2.72
PUDP-203ENST00000424830 SMARCA2P51531 1590 aa31.96■■■□□ 2.71
PUDP-203ENST00000424830 SMARCA4P51532 1647 aa31.94■■■□□ 2.7
PUDP-203ENST00000424830 HMGXB3Q12766 1538 aa31.93■■■□□ 2.7
PUDP-203ENST00000424830 BAZ1AQ9NRL2 1556 aaPredicted RBP31.75■■■□□ 2.67
PUDP-203ENST00000424830 NESP48681 1621 aa31.73■■■□□ 2.67
PUDP-203ENST00000424830 BAZ1BQ9UIG0 1483 aaKnown RBP31.73■■■□□ 2.67
PUDP-203ENST00000424830 PEG3Q9GZU2 1588 aa31.63■■■□□ 2.65
PUDP-203ENST00000424830 LAMC3Q9Y6N6 1575 aa31.53■■■□□ 2.64
PUDP-203ENST00000424830 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.63
PUDP-203ENST00000424830 MROH2BQ7Z745 1585 aa31.44■■■□□ 2.62
PUDP-203ENST00000424830 KIF21AQ7Z4S6 1674 aa31.36■■■□□ 2.61
PUDP-203ENST00000424830 PDS5BQ9NTI5 1447 aa31.35■■■□□ 2.61
PUDP-203ENST00000424830 CADPSQ9ULU8 1353 aa31.18■■■□□ 2.58
PUDP-203ENST00000424830 MRC2Q9UBG0 1479 aa31.09■■■□□ 2.57
PUDP-203ENST00000424830 WIZO95785 1651 aa31.06■■■□□ 2.56
PUDP-203ENST00000424830 WDR62O43379 1518 aa31.02■■■□□ 2.56
PUDP-203ENST00000424830 CEP164Q9UPV0 1460 aa30.92■■■□□ 2.54
PUDP-203ENST00000424830 TRIM41Q8WV44 630 aa30.85■■■□□ 2.53
PUDP-203ENST00000424830 FANCD2Q9BXW9 1451 aa30.83■■■□□ 2.53
PUDP-203ENST00000424830 CFTRP13569 1480 aa30.76■■■□□ 2.51
PUDP-203ENST00000424830 RSF1Q96T23 1441 aaPredicted RBP30.69■■■□□ 2.5
PUDP-203ENST00000424830 TOP2AP11388 1531 aaKnown RBP30.68■■■□□ 2.5
PUDP-203ENST00000424830 URB2Q14146 1524 aaKnown RBP30.58■■■□□ 2.49
PUDP-203ENST00000424830 OSCARQ8IYS5 282 aa30.57■■■□□ 2.48
PUDP-203ENST00000424830 PRDM2Q13029 1718 aa30.48■■■□□ 2.47
PUDP-203ENST00000424830 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
PUDP-203ENST00000424830 CCDC88BA6NC98 1476 aa30.29■■■□□ 2.44
PUDP-203ENST00000424830 ZNF608Q9ULD9 1512 aaPredicted RBP30.24■■■□□ 2.43
PUDP-203ENST00000424830 TOPBP1Q92547 1522 aa30.21■■■□□ 2.43
PUDP-203ENST00000424830 RIMBP3CA6NJZ7 1639 aa30.21■■■□□ 2.43
PUDP-203ENST00000424830 RIMBP3BA6NNM3 1639 aa30.21■■■□□ 2.43
PUDP-203ENST00000424830 RIMBP3Q9UFD9 1639 aa30.21■■■□□ 2.43
PUDP-203ENST00000424830 ABCC8Q09428 1581 aa30.16■■■□□ 2.42
PUDP-203ENST00000424830 EIF4G3O43432 1585 aaKnown RBP30.11■■■□□ 2.41
PUDP-203ENST00000424830 DNMBPQ6XZF7 1577 aa30.1■■■□□ 2.41
PUDP-203ENST00000424830 ARHGEF11O15085 1522 aa30.08■■■□□ 2.41
PUDP-203ENST00000424830 TARBP1Q13395 1621 aaKnown RBP29.96■■■□□ 2.39
PUDP-203ENST00000424830 CHD1O14646 1710 aa29.94■■■□□ 2.38
PUDP-203ENST00000424830 AQRO60306 1485 aaKnown RBP eCLIP29.93■■■□□ 2.38
PUDP-203ENST00000424830 POLA1P09884 1462 aaPredicted RBP29.89■■■□□ 2.37
PUDP-203ENST00000424830 CYB5RLQ6IPT4 315 aa29.85■■■□□ 2.37
PUDP-203ENST00000424830 FBLN2P98095 1184 aa29.83■■■□□ 2.37
PUDP-203ENST00000424830 RAD54L2Q9Y4B4 1467 aa29.75■■■□□ 2.35
PUDP-203ENST00000424830 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
PUDP-203ENST00000424830 SOGA1O94964 1423 aa29.74■■■□□ 2.35
PUDP-203ENST00000424830 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.35
PUDP-203ENST00000424830 WDR97A6NE52 1622 aa29.69■■■□□ 2.34
PUDP-203ENST00000424830 FGD5Q6ZNL6 1462 aa29.66■■■□□ 2.34
PUDP-203ENST00000424830 TRHP20396 242 aaPredicted RBP29.66■■■□□ 2.34
PUDP-203ENST00000424830 SNAPC4Q5SXM2 1469 aa29.65■■■□□ 2.34
PUDP-203ENST00000424830 MAGI1Q96QZ7 1491 aaPredicted RBP29.58■■■□□ 2.33
PUDP-203ENST00000424830 CLASP1Q7Z460 1538 aa29.57■■■□□ 2.32
PUDP-203ENST00000424830 CHMP7Q8WUX9 453 aaPredicted RBP29.57■■■□□ 2.32
PUDP-203ENST00000424830 SYNJ1O43426 1573 aa29.57■■■□□ 2.32
PUDP-203ENST00000424830 CUX1P39880 1505 aa29.57■■■□□ 2.32
PUDP-203ENST00000424830 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
PUDP-203ENST00000424830 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
PUDP-203ENST00000424830 PBRM1Q86U86 1689 aa29.42■■■□□ 2.3
PUDP-203ENST00000424830 GAPVD1Q14C86 1478 aa29.39■■■□□ 2.29
PUDP-203ENST00000424830 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
PUDP-203ENST00000424830 ABCA5Q8WWZ7 1642 aa29.29■■■□□ 2.28
PUDP-203ENST00000424830 GRIN2AQ12879 1464 aa29.15■■■□□ 2.26
PUDP-203ENST00000424830 WRNQ14191 1432 aaPredicted RBP eCLIP29.14■■■□□ 2.26
PUDP-203ENST00000424830 ADAMTS12P58397 1594 aa29.11■■■□□ 2.25
PUDP-203ENST00000424830 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
PUDP-203ENST00000424830 ERCC6L2Q5T890 1561 aa29.06■■■□□ 2.24
PUDP-203ENST00000424830 NUP160Q12769 1436 aa29.05■■■□□ 2.24
PUDP-203ENST00000424830 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
PUDP-203ENST00000424830 TOP2BQ02880 1626 aa29.05■■■□□ 2.24
PUDP-203ENST00000424830 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
PUDP-203ENST00000424830 AEBP2Q6ZN18 517 aaPredicted RBP29.03■■■□□ 2.24
PUDP-203ENST00000424830 FHAD1B1AJZ9 1412 aa29.01■■■□□ 2.23
PUDP-203ENST00000424830 SHROOM2Q13796 1616 aa28.97■■■□□ 2.23
PUDP-203ENST00000424830 ERICH3Q5RHP9 1530 aa28.95■■■□□ 2.23
PUDP-203ENST00000424830 PRG4Q92954 1404 aaPredicted RBP28.8■■■□□ 2.2
PUDP-203ENST00000424830 KIF13AQ9H1H9 1805 aa28.75■■■□□ 2.19
PUDP-203ENST00000424830 JPH4Q96JJ6 628 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms