RNA–Protein interactions for RNA: ENST00000424501.5

FADS1-203, Transcript of fatty acid desaturase 1, humanhuman

TSL 3

Gene FADS1, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FADS1-203ENST00000424501 NISCHQ9Y2I1 1504 aa32.72■■■□□ 2.83
FADS1-203ENST00000424501 CCDC180Q9P1Z9 1646 aa29.34■■■□□ 2.29
FADS1-203ENST00000424501 ABCC9O60706 1549 aa29.31■■■□□ 2.28
FADS1-203ENST00000424501 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
FADS1-203ENST00000424501 NACADO15069 1562 aa27.75■■■□□ 2.03
FADS1-203ENST00000424501 DCAF8L2P0C7V8 631 aa27.72■■■□□ 2.03
FADS1-203ENST00000424501 DNAJC5BQ9UF47 199 aa27.61■■■□□ 2.01
FADS1-203ENST00000424501 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
FADS1-203ENST00000424501 PABPN1Q86U42 306 aaKnown RBP eCLIP27.32■■□□□ 1.96
FADS1-203ENST00000424501 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
FADS1-203ENST00000424501 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
FADS1-203ENST00000424501 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
FADS1-203ENST00000424501 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
FADS1-203ENST00000424501 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
FADS1-203ENST00000424501 SCRIBQ14160 1630 aa26.74■■□□□ 1.87
FADS1-203ENST00000424501 CC2D2AQ9P2K1 1620 aa26.47■■□□□ 1.83
FADS1-203ENST00000424501 EIF4G1Q04637 1599 aaKnown RBP26.42■■□□□ 1.82
FADS1-203ENST00000424501 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
FADS1-203ENST00000424501 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
FADS1-203ENST00000424501 NCAPD3P42695 1498 aa25.61■■□□□ 1.69
FADS1-203ENST00000424501 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
FADS1-203ENST00000424501 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
FADS1-203ENST00000424501 SMARCA2P51531 1590 aa25.48■■□□□ 1.67
FADS1-203ENST00000424501 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
FADS1-203ENST00000424501 HMGXB3Q12766 1538 aa25.41■■□□□ 1.66
FADS1-203ENST00000424501 ERCC6Q03468 1493 aa25.35■■□□□ 1.65
FADS1-203ENST00000424501 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
FADS1-203ENST00000424501 CUX2O14529 1486 aa25.25■■□□□ 1.63
FADS1-203ENST00000424501 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
FADS1-203ENST00000424501 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
FADS1-203ENST00000424501 NESP48681 1621 aa25.17■■□□□ 1.62
FADS1-203ENST00000424501 LAMC3Q9Y6N6 1575 aa25.03■■□□□ 1.6
FADS1-203ENST00000424501 PDS5BQ9NTI5 1447 aa24.93■■□□□ 1.58
FADS1-203ENST00000424501 WIZO95785 1651 aa24.91■■□□□ 1.58
FADS1-203ENST00000424501 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
FADS1-203ENST00000424501 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
FADS1-203ENST00000424501 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
FADS1-203ENST00000424501 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
FADS1-203ENST00000424501 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
FADS1-203ENST00000424501 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
FADS1-203ENST00000424501 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
FADS1-203ENST00000424501 WDR62O43379 1518 aa24.58■■□□□ 1.53
FADS1-203ENST00000424501 FANCD2Q9BXW9 1451 aa24.56■■□□□ 1.52
FADS1-203ENST00000424501 CFTRP13569 1480 aa24.55■■□□□ 1.52
FADS1-203ENST00000424501 TRIM41Q8WV44 630 aa24.39■■□□□ 1.49
FADS1-203ENST00000424501 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.49
FADS1-203ENST00000424501 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
FADS1-203ENST00000424501 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
FADS1-203ENST00000424501 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
FADS1-203ENST00000424501 IFT140Q96RY7 1462 aa24.1■■□□□ 1.45
FADS1-203ENST00000424501 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
FADS1-203ENST00000424501 TOPBP1Q92547 1522 aa24.09■■□□□ 1.45
FADS1-203ENST00000424501 ZNF608Q9ULD9 1512 aaPredicted RBP24.01■■□□□ 1.43
FADS1-203ENST00000424501 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
FADS1-203ENST00000424501 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
FADS1-203ENST00000424501 EIF4G3O43432 1585 aaKnown RBP23.89■■□□□ 1.41
FADS1-203ENST00000424501 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
FADS1-203ENST00000424501 AQRO60306 1485 aaKnown RBP eCLIP23.83■■□□□ 1.416e-9■■■■□ 25.6
FADS1-203ENST00000424501 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
FADS1-203ENST00000424501 SOGA1O94964 1423 aa23.78■■□□□ 1.4
FADS1-203ENST00000424501 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
FADS1-203ENST00000424501 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
FADS1-203ENST00000424501 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
FADS1-203ENST00000424501 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
FADS1-203ENST00000424501 FBLN2P98095 1184 aa23.75■■□□□ 1.39
FADS1-203ENST00000424501 CHD1O14646 1710 aa23.71■■□□□ 1.39
FADS1-203ENST00000424501 TDRD9Q8NDG6 1382 aaKnown RBP23.71■■□□□ 1.39
FADS1-203ENST00000424501 ARHGEF11O15085 1522 aa23.7■■□□□ 1.38
FADS1-203ENST00000424501 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
FADS1-203ENST00000424501 CUX1P39880 1505 aa23.67■■□□□ 1.38
FADS1-203ENST00000424501 WDR97A6NE52 1622 aa23.64■■□□□ 1.38
FADS1-203ENST00000424501 CYB5RLQ6IPT4 315 aa23.6■■□□□ 1.37
FADS1-203ENST00000424501 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
FADS1-203ENST00000424501 CHMP7Q8WUX9 453 aaPredicted RBP23.58■■□□□ 1.37
FADS1-203ENST00000424501 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
FADS1-203ENST00000424501 MAGI1Q96QZ7 1491 aaPredicted RBP23.54■■□□□ 1.36
FADS1-203ENST00000424501 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
FADS1-203ENST00000424501 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
FADS1-203ENST00000424501 SYNJ2O15056 1496 aa23.46■■□□□ 1.35
FADS1-203ENST00000424501 ARAP1Q96P48 1450 aa23.45■■□□□ 1.34
FADS1-203ENST00000424501 ABCA10Q8WWZ4 1543 aa23.43■■□□□ 1.34
FADS1-203ENST00000424501 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
FADS1-203ENST00000424501 CLASP1Q7Z460 1538 aa23.42■■□□□ 1.34
FADS1-203ENST00000424501 WRNQ14191 1432 aaPredicted RBP eCLIP23.4■■□□□ 1.342e-8■■□□□ 13.6
FADS1-203ENST00000424501 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
FADS1-203ENST00000424501 TRHP20396 242 aaPredicted RBP23.36■■□□□ 1.33
FADS1-203ENST00000424501 TOP2BQ02880 1626 aa23.32■■□□□ 1.32
FADS1-203ENST00000424501 BIVM-ERCC5R4GMW8 1640 aa23.31■■□□□ 1.32
FADS1-203ENST00000424501 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
FADS1-203ENST00000424501 ADAMTS12P58397 1594 aa23.2■■□□□ 1.3
FADS1-203ENST00000424501 FHAD1B1AJZ9 1412 aa23.18■■□□□ 1.3
FADS1-203ENST00000424501 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
FADS1-203ENST00000424501 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
FADS1-203ENST00000424501 NUP160Q12769 1436 aa23.13■■□□□ 1.29
FADS1-203ENST00000424501 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
FADS1-203ENST00000424501 ERCC6L2Q5T890 1561 aa23.05■■□□□ 1.28
FADS1-203ENST00000424501 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
FADS1-203ENST00000424501 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
FADS1-203ENST00000424501 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
FADS1-203ENST00000424501 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms