RNA–Protein interactions for RNA: ENST00000424481.1

HNRNPA1P28-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 28, humanhuman

BASIC

Gene HNRNPA1P28, Length 961 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P28-201ENST00000424481 NISCHQ9Y2I1 1504 aa42.15■■■■■ 4.34
HNRNPA1P28-201ENST00000424481 ABCC9O60706 1549 aa38.37■■■■□ 3.73
HNRNPA1P28-201ENST00000424481 CCDC180Q9P1Z9 1646 aa38.09■■■■□ 3.69
HNRNPA1P28-201ENST00000424481 RB1CC1Q8TDY2 1594 aa36.48■■■■□ 3.43
HNRNPA1P28-201ENST00000424481 DNAJC5BQ9UF47 199 aa36.33■■■■□ 3.41
HNRNPA1P28-201ENST00000424481 NACADO15069 1562 aa36.15■■■■□ 3.38
HNRNPA1P28-201ENST00000424481 DCAF8L2P0C7V8 631 aa35.72■■■■□ 3.31
HNRNPA1P28-201ENST00000424481 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
HNRNPA1P28-201ENST00000424481 MYO15BQ96JP2 1530 aa35.57■■■■□ 3.28
HNRNPA1P28-201ENST00000424481 UNC13AQ9UPW8 1703 aa35.51■■■■□ 3.27
HNRNPA1P28-201ENST00000424481 BICRAQ9NZM4 1560 aa35.3■■■■□ 3.24
HNRNPA1P28-201ENST00000424481 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
HNRNPA1P28-201ENST00000424481 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
HNRNPA1P28-201ENST00000424481 DCAF1Q9Y4B6 1507 aa34.96■■■■□ 3.19
HNRNPA1P28-201ENST00000424481 CECR2Q9BXF3 1484 aa34.69■■■■□ 3.14
HNRNPA1P28-201ENST00000424481 CC2D2AQ9P2K1 1620 aa34.68■■■■□ 3.14
HNRNPA1P28-201ENST00000424481 EIF4G1Q04637 1599 aaKnown RBP34.52■■■■□ 3.12
HNRNPA1P28-201ENST00000424481 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
HNRNPA1P28-201ENST00000424481 DNAJC5Q9H3Z4 198 aa33.88■■■■□ 3.01
HNRNPA1P28-201ENST00000424481 CUX2O14529 1486 aa33.42■■■□□ 2.94
HNRNPA1P28-201ENST00000424481 NCAPD3P42695 1498 aa33.35■■■□□ 2.93
HNRNPA1P28-201ENST00000424481 ERCC6Q03468 1493 aa33.26■■■□□ 2.92
HNRNPA1P28-201ENST00000424481 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
HNRNPA1P28-201ENST00000424481 SMARCA2P51531 1590 aa33.09■■■□□ 2.89
HNRNPA1P28-201ENST00000424481 HMGXB3Q12766 1538 aa33.05■■■□□ 2.88
HNRNPA1P28-201ENST00000424481 SMARCA4P51532 1647 aa32.95■■■□□ 2.87
HNRNPA1P28-201ENST00000424481 BAZ1AQ9NRL2 1556 aaPredicted RBP32.8■■■□□ 2.84
HNRNPA1P28-201ENST00000424481 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
HNRNPA1P28-201ENST00000424481 NESP48681 1621 aa32.79■■■□□ 2.84
HNRNPA1P28-201ENST00000424481 PEG3Q9GZU2 1588 aa32.71■■■□□ 2.83
HNRNPA1P28-201ENST00000424481 LAMC3Q9Y6N6 1575 aa32.68■■■□□ 2.82
HNRNPA1P28-201ENST00000424481 THOC2Q8NI27 1593 aaKnown RBP32.61■■■□□ 2.81
HNRNPA1P28-201ENST00000424481 PDS5BQ9NTI5 1447 aa32.54■■■□□ 2.8
HNRNPA1P28-201ENST00000424481 MROH2BQ7Z745 1585 aa32.39■■■□□ 2.78
HNRNPA1P28-201ENST00000424481 KIF21AQ7Z4S6 1674 aa32.39■■■□□ 2.78
HNRNPA1P28-201ENST00000424481 CADPSQ9ULU8 1353 aa32.3■■■□□ 2.76
HNRNPA1P28-201ENST00000424481 MRC2Q9UBG0 1479 aa32.21■■■□□ 2.75
HNRNPA1P28-201ENST00000424481 WDR62O43379 1518 aa32.13■■■□□ 2.73
HNRNPA1P28-201ENST00000424481 TRIM41Q8WV44 630 aa32.09■■■□□ 2.73
HNRNPA1P28-201ENST00000424481 CEP164Q9UPV0 1460 aa31.99■■■□□ 2.71
HNRNPA1P28-201ENST00000424481 WIZO95785 1651 aa31.96■■■□□ 2.71
HNRNPA1P28-201ENST00000424481 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
HNRNPA1P28-201ENST00000424481 RSF1Q96T23 1441 aaPredicted RBP31.87■■■□□ 2.69
HNRNPA1P28-201ENST00000424481 OSCARQ8IYS5 282 aa31.83■■■□□ 2.69
HNRNPA1P28-201ENST00000424481 CFTRP13569 1480 aa31.83■■■□□ 2.69
HNRNPA1P28-201ENST00000424481 TOP2AP11388 1531 aaKnown RBP31.72■■■□□ 2.67
HNRNPA1P28-201ENST00000424481 URB2Q14146 1524 aaKnown RBP31.59■■■□□ 2.65
HNRNPA1P28-201ENST00000424481 PRDM2Q13029 1718 aa31.46■■■□□ 2.63
HNRNPA1P28-201ENST00000424481 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
HNRNPA1P28-201ENST00000424481 RIMBP3CA6NJZ7 1639 aa31.33■■■□□ 2.61
HNRNPA1P28-201ENST00000424481 RIMBP3BA6NNM3 1639 aa31.33■■■□□ 2.61
HNRNPA1P28-201ENST00000424481 RIMBP3Q9UFD9 1639 aa31.33■■■□□ 2.61
HNRNPA1P28-201ENST00000424481 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
HNRNPA1P28-201ENST00000424481 CCDC88BA6NC98 1476 aa31.26■■■□□ 2.59
HNRNPA1P28-201ENST00000424481 ZNF608Q9ULD9 1512 aaPredicted RBP31.25■■■□□ 2.59
HNRNPA1P28-201ENST00000424481 TOPBP1Q92547 1522 aa31.22■■■□□ 2.59
HNRNPA1P28-201ENST00000424481 ARHGEF11O15085 1522 aa31.21■■■□□ 2.59
HNRNPA1P28-201ENST00000424481 EIF4G3O43432 1585 aaKnown RBP31.1■■■□□ 2.57
HNRNPA1P28-201ENST00000424481 DNMBPQ6XZF7 1577 aa31.09■■■□□ 2.57
HNRNPA1P28-201ENST00000424481 CYB5RLQ6IPT4 315 aa31.02■■■□□ 2.56
HNRNPA1P28-201ENST00000424481 TARBP1Q13395 1621 aaKnown RBP30.97■■■□□ 2.55
HNRNPA1P28-201ENST00000424481 CHD1O14646 1710 aa30.94■■■□□ 2.54
HNRNPA1P28-201ENST00000424481 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.54
HNRNPA1P28-201ENST00000424481 FBLN2P98095 1184 aa30.87■■■□□ 2.53
HNRNPA1P28-201ENST00000424481 POLA1P09884 1462 aaPredicted RBP30.86■■■□□ 2.53
HNRNPA1P28-201ENST00000424481 TRHP20396 242 aaPredicted RBP30.85■■■□□ 2.53
HNRNPA1P28-201ENST00000424481 ARAP1Q96P48 1450 aa30.84■■■□□ 2.53
HNRNPA1P28-201ENST00000424481 WDR97A6NE52 1622 aa30.79■■■□□ 2.52
HNRNPA1P28-201ENST00000424481 SOGA1O94964 1423 aa30.77■■■□□ 2.52
HNRNPA1P28-201ENST00000424481 RAD54L2Q9Y4B4 1467 aa30.7■■■□□ 2.5
HNRNPA1P28-201ENST00000424481 TDRD9Q8NDG6 1382 aaKnown RBP30.69■■■□□ 2.5
HNRNPA1P28-201ENST00000424481 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
HNRNPA1P28-201ENST00000424481 MAGI1Q96QZ7 1491 aaPredicted RBP30.64■■■□□ 2.5
HNRNPA1P28-201ENST00000424481 SNAPC4Q5SXM2 1469 aa30.63■■■□□ 2.49
HNRNPA1P28-201ENST00000424481 SYNJ1O43426 1573 aa30.63■■■□□ 2.49
HNRNPA1P28-201ENST00000424481 CLASP1Q7Z460 1538 aa30.62■■■□□ 2.49
HNRNPA1P28-201ENST00000424481 FGD5Q6ZNL6 1462 aa30.59■■■□□ 2.49
HNRNPA1P28-201ENST00000424481 GRIN2BQ13224 1484 aa30.57■■■□□ 2.48
HNRNPA1P28-201ENST00000424481 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
HNRNPA1P28-201ENST00000424481 SUPT5HO00267 1087 aaKnown RBP30.5■■■□□ 2.47
HNRNPA1P28-201ENST00000424481 CUX1P39880 1505 aa30.47■■■□□ 2.47
HNRNPA1P28-201ENST00000424481 GAPVD1Q14C86 1478 aa30.38■■■□□ 2.45
HNRNPA1P28-201ENST00000424481 AEBP2Q6ZN18 517 aaPredicted RBP30.35■■■□□ 2.45
HNRNPA1P28-201ENST00000424481 PBRM1Q86U86 1689 aa30.34■■■□□ 2.45
HNRNPA1P28-201ENST00000424481 ABCA10Q8WWZ4 1543 aa30.29■■■□□ 2.44
HNRNPA1P28-201ENST00000424481 ABCA5Q8WWZ7 1642 aa30.23■■■□□ 2.43
HNRNPA1P28-201ENST00000424481 GRIN2AQ12879 1464 aa30.14■■■□□ 2.42
HNRNPA1P28-201ENST00000424481 WRNQ14191 1432 aaPredicted RBP eCLIP30.12■■■□□ 2.41
HNRNPA1P28-201ENST00000424481 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
HNRNPA1P28-201ENST00000424481 TOP2BQ02880 1626 aa30.1■■■□□ 2.41
HNRNPA1P28-201ENST00000424481 NUP160Q12769 1436 aa30.07■■■□□ 2.4
HNRNPA1P28-201ENST00000424481 ADAMTS12P58397 1594 aa30.03■■■□□ 2.4
HNRNPA1P28-201ENST00000424481 CEP170Q5SW79 1584 aa30.02■■■□□ 2.4
HNRNPA1P28-201ENST00000424481 FHAD1B1AJZ9 1412 aa30.01■■■□□ 2.39
HNRNPA1P28-201ENST00000424481 ERCC6L2Q5T890 1561 aa29.98■■■□□ 2.39
HNRNPA1P28-201ENST00000424481 SHROOM2Q13796 1616 aa29.97■■■□□ 2.39
HNRNPA1P28-201ENST00000424481 ERICH3Q5RHP9 1530 aa29.93■■■□□ 2.38
HNRNPA1P28-201ENST00000424481 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
HNRNPA1P28-201ENST00000424481 JPH4Q96JJ6 628 aa29.79■■■□□ 2.36
HNRNPA1P28-201ENST00000424481 KIF13AQ9H1H9 1805 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms