RNA–Protein interactions for RNA: ENST00000424167.2

MDH2-202, Transcript of malate dehydrogenase 2, humanhuman

TSL 2

Gene MDH2, Length 681 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH2-202ENST00000424167 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
MDH2-202ENST00000424167 ABCC9O60706 1549 aa28.51■■■□□ 2.15
MDH2-202ENST00000424167 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
MDH2-202ENST00000424167 RB1CC1Q8TDY2 1594 aa27.08■■□□□ 1.93
MDH2-202ENST00000424167 NACADO15069 1562 aa26.88■■□□□ 1.89
MDH2-202ENST00000424167 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
MDH2-202ENST00000424167 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
MDH2-202ENST00000424167 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
MDH2-202ENST00000424167 PABPN1Q86U42 306 aaKnown RBP eCLIP26.52■■□□□ 1.84
MDH2-202ENST00000424167 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
MDH2-202ENST00000424167 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
MDH2-202ENST00000424167 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
MDH2-202ENST00000424167 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
MDH2-202ENST00000424167 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
MDH2-202ENST00000424167 SCRIBQ14160 1630 aa25.91■■□□□ 1.74
MDH2-202ENST00000424167 CC2D2AQ9P2K1 1620 aa25.76■■□□□ 1.71
MDH2-202ENST00000424167 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
MDH2-202ENST00000424167 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
MDH2-202ENST00000424167 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
MDH2-202ENST00000424167 ATAD2BQ9ULI0 1458 aa24.74■■□□□ 1.55
MDH2-202ENST00000424167 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
MDH2-202ENST00000424167 DNAJC5Q9H3Z4 198 aa24.66■■□□□ 1.54
MDH2-202ENST00000424167 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
MDH2-202ENST00000424167 HMGXB3Q12766 1538 aa24.63■■□□□ 1.53
MDH2-202ENST00000424167 CUX2O14529 1486 aa24.58■■□□□ 1.53
MDH2-202ENST00000424167 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
MDH2-202ENST00000424167 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
MDH2-202ENST00000424167 NESP48681 1621 aa24.49■■□□□ 1.51
MDH2-202ENST00000424167 BAZ1BQ9UIG0 1483 aaKnown RBP24.48■■□□□ 1.51
MDH2-202ENST00000424167 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
MDH2-202ENST00000424167 MROH2BQ7Z745 1585 aa24.39■■□□□ 1.5
MDH2-202ENST00000424167 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
MDH2-202ENST00000424167 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
MDH2-202ENST00000424167 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
MDH2-202ENST00000424167 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
MDH2-202ENST00000424167 WIZO95785 1651 aa24.1■■□□□ 1.45
MDH2-202ENST00000424167 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
MDH2-202ENST00000424167 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
MDH2-202ENST00000424167 WDR62O43379 1518 aa23.89■■□□□ 1.42
MDH2-202ENST00000424167 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
MDH2-202ENST00000424167 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
MDH2-202ENST00000424167 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
MDH2-202ENST00000424167 CFTRP13569 1480 aa23.77■■□□□ 1.4
MDH2-202ENST00000424167 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
MDH2-202ENST00000424167 URB2Q14146 1524 aaKnown RBP23.63■■□□□ 1.37
MDH2-202ENST00000424167 PRDM2Q13029 1718 aa23.55■■□□□ 1.36
MDH2-202ENST00000424167 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
MDH2-202ENST00000424167 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
MDH2-202ENST00000424167 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
MDH2-202ENST00000424167 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
MDH2-202ENST00000424167 IFT140Q96RY7 1462 aa23.34■■□□□ 1.33
MDH2-202ENST00000424167 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
MDH2-202ENST00000424167 DNMBPQ6XZF7 1577 aa23.24■■□□□ 1.31
MDH2-202ENST00000424167 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
MDH2-202ENST00000424167 EIF4G3O43432 1585 aaKnown RBP23.21■■□□□ 1.31
MDH2-202ENST00000424167 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
MDH2-202ENST00000424167 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
MDH2-202ENST00000424167 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
MDH2-202ENST00000424167 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
MDH2-202ENST00000424167 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.294e-8■■■■□ 24.7
MDH2-202ENST00000424167 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
MDH2-202ENST00000424167 POLA1P09884 1462 aaPredicted RBP23.09■■□□□ 1.29
MDH2-202ENST00000424167 CHD1O14646 1710 aa23.06■■□□□ 1.28
MDH2-202ENST00000424167 RAD54L2Q9Y4B4 1467 aa23.02■■□□□ 1.28
MDH2-202ENST00000424167 SOGA1O94964 1423 aa22.96■■□□□ 1.27
MDH2-202ENST00000424167 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
MDH2-202ENST00000424167 TDRD9Q8NDG6 1382 aaKnown RBP22.94■■□□□ 1.26
MDH2-202ENST00000424167 CUX1P39880 1505 aa22.92■■□□□ 1.26
MDH2-202ENST00000424167 FBLN2P98095 1184 aa22.92■■□□□ 1.26
MDH2-202ENST00000424167 CYB5RLQ6IPT4 315 aa22.89■■□□□ 1.25
MDH2-202ENST00000424167 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
MDH2-202ENST00000424167 SNAPC4Q5SXM2 1469 aa22.87■■□□□ 1.25
MDH2-202ENST00000424167 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
MDH2-202ENST00000424167 CLASP1Q7Z460 1538 aa22.8■■□□□ 1.24
MDH2-202ENST00000424167 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
MDH2-202ENST00000424167 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
MDH2-202ENST00000424167 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
MDH2-202ENST00000424167 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
MDH2-202ENST00000424167 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
MDH2-202ENST00000424167 SYNJ2O15056 1496 aa22.72■■□□□ 1.23
MDH2-202ENST00000424167 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
MDH2-202ENST00000424167 SUPT5HO00267 1087 aaKnown RBP22.67■■□□□ 1.22
MDH2-202ENST00000424167 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
MDH2-202ENST00000424167 ABCA5Q8WWZ7 1642 aa22.66■■□□□ 1.22
MDH2-202ENST00000424167 TRHP20396 242 aaPredicted RBP22.64■■□□□ 1.21
MDH2-202ENST00000424167 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
MDH2-202ENST00000424167 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
MDH2-202ENST00000424167 TOP2BQ02880 1626 aa22.51■■□□□ 1.19
MDH2-202ENST00000424167 GRIN2AQ12879 1464 aa22.51■■□□□ 1.19
MDH2-202ENST00000424167 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
MDH2-202ENST00000424167 CEP170Q5SW79 1584 aa22.45■■□□□ 1.18
MDH2-202ENST00000424167 ERCC6L2Q5T890 1561 aa22.45■■□□□ 1.18
MDH2-202ENST00000424167 NUP160Q12769 1436 aa22.44■■□□□ 1.18
MDH2-202ENST00000424167 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
MDH2-202ENST00000424167 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
MDH2-202ENST00000424167 SHROOM2Q13796 1616 aa22.36■■□□□ 1.17
MDH2-202ENST00000424167 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
MDH2-202ENST00000424167 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
MDH2-202ENST00000424167 JPH4Q96JJ6 628 aa22.16■■□□□ 1.14
MDH2-202ENST00000424167 KIF13AQ9H1H9 1805 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms