RNA–Protein interactions for RNA: ENST00000423967.1

AP001058.1-201, humanhuman

TSL 2 BASIC

Gene AP001058.1, Length 463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001058.1-201ENST00000423967 NISCHQ9Y2I1 1504 aa42.69■■■■■ 4.42
AP001058.1-201ENST00000423967 ABCC9O60706 1549 aa39.15■■■■□ 3.86
AP001058.1-201ENST00000423967 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
AP001058.1-201ENST00000423967 DNAJC5BQ9UF47 199 aa37.28■■■■□ 3.56
AP001058.1-201ENST00000423967 RB1CC1Q8TDY2 1594 aa36.86■■■■□ 3.49
AP001058.1-201ENST00000423967 DCAF8L2P0C7V8 631 aa36.5■■■■□ 3.43
AP001058.1-201ENST00000423967 PABPN1Q86U42 306 aaKnown RBP eCLIP36.47■■■■□ 3.43
AP001058.1-201ENST00000423967 NACADO15069 1562 aa36.46■■■■□ 3.43
AP001058.1-201ENST00000423967 UNC13AQ9UPW8 1703 aa36.14■■■■□ 3.38
AP001058.1-201ENST00000423967 BICRAQ9NZM4 1560 aa35.9■■■■□ 3.34
AP001058.1-201ENST00000423967 MYO15BQ96JP2 1530 aa35.68■■■■□ 3.3
AP001058.1-201ENST00000423967 CC2D2AQ9P2K1 1620 aa35.27■■■■□ 3.24
AP001058.1-201ENST00000423967 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
AP001058.1-201ENST00000423967 CECR2Q9BXF3 1484 aa35.24■■■■□ 3.23
AP001058.1-201ENST00000423967 SCRIBQ14160 1630 aa35.18■■■■□ 3.22
AP001058.1-201ENST00000423967 DCAF1Q9Y4B6 1507 aa35.09■■■■□ 3.21
AP001058.1-201ENST00000423967 SHROOM4Q9ULL8 1493 aa35.09■■■■□ 3.21
AP001058.1-201ENST00000423967 EIF4G1Q04637 1599 aaKnown RBP35.03■■■■□ 3.2
AP001058.1-201ENST00000423967 DNAJC5Q9H3Z4 198 aa34.44■■■■□ 3.1
AP001058.1-201ENST00000423967 CUX2O14529 1486 aa33.76■■■□□ 2.99
AP001058.1-201ENST00000423967 ERCC6Q03468 1493 aa33.76■■■□□ 2.99
AP001058.1-201ENST00000423967 NCAPD3P42695 1498 aa33.7■■■□□ 2.99
AP001058.1-201ENST00000423967 ATAD2BQ9ULI0 1458 aa33.59■■■□□ 2.97
AP001058.1-201ENST00000423967 NESP48681 1621 aa33.52■■■□□ 2.96
AP001058.1-201ENST00000423967 SMARCA4P51532 1647 aa33.42■■■□□ 2.94
AP001058.1-201ENST00000423967 SMARCA2P51531 1590 aa33.38■■■□□ 2.93
AP001058.1-201ENST00000423967 HMGXB3Q12766 1538 aa33.35■■■□□ 2.93
AP001058.1-201ENST00000423967 BAZ1BQ9UIG0 1483 aaKnown RBP33.23■■■□□ 2.91
AP001058.1-201ENST00000423967 THOC2Q8NI27 1593 aaKnown RBP33.14■■■□□ 2.9
AP001058.1-201ENST00000423967 BAZ1AQ9NRL2 1556 aaPredicted RBP33.12■■■□□ 2.89
AP001058.1-201ENST00000423967 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
AP001058.1-201ENST00000423967 PEG3Q9GZU2 1588 aa32.99■■■□□ 2.87
AP001058.1-201ENST00000423967 LAMC3Q9Y6N6 1575 aa32.99■■■□□ 2.87
AP001058.1-201ENST00000423967 MROH2BQ7Z745 1585 aa32.98■■■□□ 2.87
AP001058.1-201ENST00000423967 TRIM41Q8WV44 630 aa32.88■■■□□ 2.85
AP001058.1-201ENST00000423967 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
AP001058.1-201ENST00000423967 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.83
AP001058.1-201ENST00000423967 MRC2Q9UBG0 1479 aa32.63■■■□□ 2.81
AP001058.1-201ENST00000423967 WIZO95785 1651 aa32.58■■■□□ 2.81
AP001058.1-201ENST00000423967 WDR62O43379 1518 aa32.54■■■□□ 2.8
AP001058.1-201ENST00000423967 CEP164Q9UPV0 1460 aa32.4■■■□□ 2.78
AP001058.1-201ENST00000423967 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
AP001058.1-201ENST00000423967 OSCARQ8IYS5 282 aa32.25■■■□□ 2.75
AP001058.1-201ENST00000423967 CFTRP13569 1480 aa32.19■■■□□ 2.74
AP001058.1-201ENST00000423967 URB2Q14146 1524 aaKnown RBP32.16■■■□□ 2.74
AP001058.1-201ENST00000423967 RSF1Q96T23 1441 aaPredicted RBP32.09■■■□□ 2.73
AP001058.1-201ENST00000423967 TOP2AP11388 1531 aaKnown RBP32.01■■■□□ 2.72
AP001058.1-201ENST00000423967 RIMBP3CA6NJZ7 1639 aa31.89■■■□□ 2.7
AP001058.1-201ENST00000423967 RIMBP3BA6NNM3 1639 aa31.89■■■□□ 2.7
AP001058.1-201ENST00000423967 RIMBP3Q9UFD9 1639 aa31.89■■■□□ 2.7
AP001058.1-201ENST00000423967 ZNF608Q9ULD9 1512 aaPredicted RBP31.89■■■□□ 2.7
AP001058.1-201ENST00000423967 PRDM2Q13029 1718 aa31.78■■■□□ 2.68
AP001058.1-201ENST00000423967 CCDC88BA6NC98 1476 aa31.75■■■□□ 2.67
AP001058.1-201ENST00000423967 IFT140Q96RY7 1462 aa31.75■■■□□ 2.67
AP001058.1-201ENST00000423967 ARHGEF11O15085 1522 aa31.71■■■□□ 2.67
AP001058.1-201ENST00000423967 TOPBP1Q92547 1522 aa31.69■■■□□ 2.66
AP001058.1-201ENST00000423967 CYB5RLQ6IPT4 315 aa31.63■■■□□ 2.65
AP001058.1-201ENST00000423967 EIF4G3O43432 1585 aaKnown RBP31.59■■■□□ 2.65
AP001058.1-201ENST00000423967 AQRO60306 1485 aaKnown RBP eCLIP31.54■■■□□ 2.64
AP001058.1-201ENST00000423967 CHD1O14646 1710 aa31.49■■■□□ 2.63
AP001058.1-201ENST00000423967 FBLN2P98095 1184 aa31.48■■■□□ 2.63
AP001058.1-201ENST00000423967 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
AP001058.1-201ENST00000423967 TRHP20396 242 aaPredicted RBP31.45■■■□□ 2.63
AP001058.1-201ENST00000423967 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
AP001058.1-201ENST00000423967 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
AP001058.1-201ENST00000423967 ARAP1Q96P48 1450 aa31.4■■■□□ 2.62
AP001058.1-201ENST00000423967 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
AP001058.1-201ENST00000423967 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
AP001058.1-201ENST00000423967 TDRD9Q8NDG6 1382 aaKnown RBP31.28■■■□□ 2.6
AP001058.1-201ENST00000423967 SOGA1O94964 1423 aa31.21■■■□□ 2.59
AP001058.1-201ENST00000423967 SNAPC4Q5SXM2 1469 aa31.15■■■□□ 2.58
AP001058.1-201ENST00000423967 FGD5Q6ZNL6 1462 aa31.09■■■□□ 2.57
AP001058.1-201ENST00000423967 CHMP7Q8WUX9 453 aaPredicted RBP31.08■■■□□ 2.57
AP001058.1-201ENST00000423967 CLASP1Q7Z460 1538 aa31.06■■■□□ 2.56
AP001058.1-201ENST00000423967 CUX1P39880 1505 aa31■■■□□ 2.55
AP001058.1-201ENST00000423967 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
AP001058.1-201ENST00000423967 GRIN2BQ13224 1484 aa30.93■■■□□ 2.54
AP001058.1-201ENST00000423967 MAGI1Q96QZ7 1491 aaPredicted RBP30.93■■■□□ 2.54
AP001058.1-201ENST00000423967 WDR97A6NE52 1622 aa30.89■■■□□ 2.54
AP001058.1-201ENST00000423967 SYNJ2O15056 1496 aa30.87■■■□□ 2.53
AP001058.1-201ENST00000423967 AEBP2Q6ZN18 517 aaPredicted RBP30.85■■■□□ 2.53
AP001058.1-201ENST00000423967 PBRM1Q86U86 1689 aa30.8■■■□□ 2.52
AP001058.1-201ENST00000423967 GAPVD1Q14C86 1478 aa30.79■■■□□ 2.52
AP001058.1-201ENST00000423967 ERCC6L2Q5T890 1561 aa30.7■■■□□ 2.5
AP001058.1-201ENST00000423967 ABCA5Q8WWZ7 1642 aa30.64■■■□□ 2.5
AP001058.1-201ENST00000423967 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
AP001058.1-201ENST00000423967 GRIN2AQ12879 1464 aa30.54■■■□□ 2.48
AP001058.1-201ENST00000423967 CEP170Q5SW79 1584 aa30.51■■■□□ 2.47
AP001058.1-201ENST00000423967 SUPT5HO00267 1087 aaKnown RBP30.47■■■□□ 2.47
AP001058.1-201ENST00000423967 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
AP001058.1-201ENST00000423967 NUP160Q12769 1436 aa30.45■■■□□ 2.46
AP001058.1-201ENST00000423967 WRNQ14191 1432 aaPredicted RBP eCLIP30.41■■■□□ 2.46
AP001058.1-201ENST00000423967 SHROOM2Q13796 1616 aa30.34■■■□□ 2.45
AP001058.1-201ENST00000423967 FHAD1B1AJZ9 1412 aa30.34■■■□□ 2.45
AP001058.1-201ENST00000423967 KIF13AQ9H1H9 1805 aa30.29■■■□□ 2.44
AP001058.1-201ENST00000423967 TOP2BQ02880 1626 aa30.28■■■□□ 2.44
AP001058.1-201ENST00000423967 BIVM-ERCC5R4GMW8 1640 aa30.28■■■□□ 2.44
AP001058.1-201ENST00000423967 PRG4Q92954 1404 aaPredicted RBP30.26■■■□□ 2.43
AP001058.1-201ENST00000423967 JPH4Q96JJ6 628 aa30.22■■■□□ 2.43
AP001058.1-201ENST00000423967 ERICH3Q5RHP9 1530 aa30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms