RNA–Protein interactions for RNA: ENST00000423664.5

UBXN11-209, Transcript of UBX domain protein 11, humanhuman

TSL 3

Gene UBXN11, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-209ENST00000423664 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
UBXN11-209ENST00000423664 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
UBXN11-209ENST00000423664 ABCC9O60706 1549 aa28.99■■■□□ 2.23
UBXN11-209ENST00000423664 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
UBXN11-209ENST00000423664 NACADO15069 1562 aa27.86■■■□□ 2.05
UBXN11-209ENST00000423664 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
UBXN11-209ENST00000423664 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.04
UBXN11-209ENST00000423664 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
UBXN11-209ENST00000423664 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
UBXN11-209ENST00000423664 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
UBXN11-209ENST00000423664 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.93
UBXN11-209ENST00000423664 PABPN1Q86U42 306 aaKnown RBP eCLIP27.06■■□□□ 1.92
UBXN11-209ENST00000423664 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
UBXN11-209ENST00000423664 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
UBXN11-209ENST00000423664 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
UBXN11-209ENST00000423664 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
UBXN11-209ENST00000423664 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
UBXN11-209ENST00000423664 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
UBXN11-209ENST00000423664 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
UBXN11-209ENST00000423664 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
UBXN11-209ENST00000423664 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
UBXN11-209ENST00000423664 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
UBXN11-209ENST00000423664 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
UBXN11-209ENST00000423664 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
UBXN11-209ENST00000423664 PEG3Q9GZU2 1588 aa25.63■■□□□ 1.69
UBXN11-209ENST00000423664 HMGXB3Q12766 1538 aa25.59■■□□□ 1.69
UBXN11-209ENST00000423664 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
UBXN11-209ENST00000423664 WIZO95785 1651 aa25.44■■□□□ 1.66
UBXN11-209ENST00000423664 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
UBXN11-209ENST00000423664 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
UBXN11-209ENST00000423664 NESP48681 1621 aa25.1■■□□□ 1.61
UBXN11-209ENST00000423664 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
UBXN11-209ENST00000423664 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
UBXN11-209ENST00000423664 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
UBXN11-209ENST00000423664 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
UBXN11-209ENST00000423664 PDS5BQ9NTI5 1447 aa24.84■■□□□ 1.57
UBXN11-209ENST00000423664 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
UBXN11-209ENST00000423664 CFTRP13569 1480 aa24.8■■□□□ 1.56
UBXN11-209ENST00000423664 THOC2Q8NI27 1593 aaKnown RBP24.75■■□□□ 1.55
UBXN11-209ENST00000423664 CUX2O14529 1486 aa24.73■■□□□ 1.55
UBXN11-209ENST00000423664 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
UBXN11-209ENST00000423664 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
UBXN11-209ENST00000423664 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
UBXN11-209ENST00000423664 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
UBXN11-209ENST00000423664 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
UBXN11-209ENST00000423664 WDR62O43379 1518 aa24.54■■□□□ 1.52
UBXN11-209ENST00000423664 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
UBXN11-209ENST00000423664 TOPBP1Q92547 1522 aa24.28■■□□□ 1.48
UBXN11-209ENST00000423664 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
UBXN11-209ENST00000423664 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
UBXN11-209ENST00000423664 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
UBXN11-209ENST00000423664 CUX1P39880 1505 aa24.1■■□□□ 1.45
UBXN11-209ENST00000423664 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
UBXN11-209ENST00000423664 TARBP1Q13395 1621 aaKnown RBP24.04■■□□□ 1.44
UBXN11-209ENST00000423664 ZNF608Q9ULD9 1512 aaPredicted RBP24.01■■□□□ 1.43
UBXN11-209ENST00000423664 FGD5Q6ZNL6 1462 aa24■■□□□ 1.43
UBXN11-209ENST00000423664 RAD54L2Q9Y4B4 1467 aa23.95■■□□□ 1.42
UBXN11-209ENST00000423664 DNAJC5Q9H3Z4 198 aa23.95■■□□□ 1.42
UBXN11-209ENST00000423664 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
UBXN11-209ENST00000423664 SOGA1O94964 1423 aa23.94■■□□□ 1.42
UBXN11-209ENST00000423664 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
UBXN11-209ENST00000423664 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
UBXN11-209ENST00000423664 TOP2BQ02880 1626 aa23.91■■□□□ 1.42
UBXN11-209ENST00000423664 SYNJ1O43426 1573 aa23.9■■□□□ 1.42
UBXN11-209ENST00000423664 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
UBXN11-209ENST00000423664 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.41
UBXN11-209ENST00000423664 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
UBXN11-209ENST00000423664 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
UBXN11-209ENST00000423664 ABCA5Q8WWZ7 1642 aa23.71■■□□□ 1.39
UBXN11-209ENST00000423664 PBRM1Q86U86 1689 aa23.7■■□□□ 1.39
UBXN11-209ENST00000423664 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
UBXN11-209ENST00000423664 CHD1O14646 1710 aa23.68■■□□□ 1.38
UBXN11-209ENST00000423664 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
UBXN11-209ENST00000423664 OSCARQ8IYS5 282 aa23.66■■□□□ 1.38
UBXN11-209ENST00000423664 SNAPC4Q5SXM2 1469 aa23.66■■□□□ 1.38
UBXN11-209ENST00000423664 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
UBXN11-209ENST00000423664 FBLN2P98095 1184 aa23.54■■□□□ 1.36
UBXN11-209ENST00000423664 SYNJ2O15056 1496 aa23.53■■□□□ 1.36
UBXN11-209ENST00000423664 ERICH3Q5RHP9 1530 aa23.5■■□□□ 1.35
UBXN11-209ENST00000423664 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
UBXN11-209ENST00000423664 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
UBXN11-209ENST00000423664 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
UBXN11-209ENST00000423664 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
UBXN11-209ENST00000423664 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
UBXN11-209ENST00000423664 GRIN2AQ12879 1464 aa23.38■■□□□ 1.33
UBXN11-209ENST00000423664 RIMBP3CA6NJZ7 1639 aa23.36■■□□□ 1.33
UBXN11-209ENST00000423664 RIMBP3BA6NNM3 1639 aa23.36■■□□□ 1.33
UBXN11-209ENST00000423664 RIMBP3Q9UFD9 1639 aa23.36■■□□□ 1.33
UBXN11-209ENST00000423664 ARHGEF11O15085 1522 aa23.33■■□□□ 1.32
UBXN11-209ENST00000423664 IGF1RP08069 1367 aa23.32■■□□□ 1.32
UBXN11-209ENST00000423664 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
UBXN11-209ENST00000423664 CUL7Q14999 1698 aa23.31■■□□□ 1.32
UBXN11-209ENST00000423664 CEP170Q5SW79 1584 aa23.29■■□□□ 1.32
UBXN11-209ENST00000423664 NUP160Q12769 1436 aa23.28■■□□□ 1.32
UBXN11-209ENST00000423664 RUSC2Q8N2Y8 1516 aa23.22■■□□□ 1.31
UBXN11-209ENST00000423664 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
UBXN11-209ENST00000423664 ARAP1Q96P48 1450 aa23.15■■□□□ 1.3
UBXN11-209ENST00000423664 SHROOM2Q13796 1616 aa23.14■■□□□ 1.29
UBXN11-209ENST00000423664 CYB5RLQ6IPT4 315 aa23.07■■□□□ 1.28
UBXN11-209ENST00000423664 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms