RNA–Protein interactions for RNA: ENST00000422467.1

PRRC2B-204, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 5

Gene PRRC2B, Length 535 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-204ENST00000422467 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
PRRC2B-204ENST00000422467 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
PRRC2B-204ENST00000422467 ABCC9O60706 1549 aa25.17■■□□□ 1.62
PRRC2B-204ENST00000422467 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
PRRC2B-204ENST00000422467 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
PRRC2B-204ENST00000422467 NACADO15069 1562 aa24.18■■□□□ 1.46
PRRC2B-204ENST00000422467 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
PRRC2B-204ENST00000422467 MYO15BQ96JP2 1530 aa23.98■■□□□ 1.43
PRRC2B-204ENST00000422467 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
PRRC2B-204ENST00000422467 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
PRRC2B-204ENST00000422467 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
PRRC2B-204ENST00000422467 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
PRRC2B-204ENST00000422467 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
PRRC2B-204ENST00000422467 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
PRRC2B-204ENST00000422467 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
PRRC2B-204ENST00000422467 EIF4G1Q04637 1599 aaKnown RBP22.81■■□□□ 1.24
PRRC2B-204ENST00000422467 CC2D2AQ9P2K1 1620 aa22.72■■□□□ 1.23
PRRC2B-204ENST00000422467 CECR2Q9BXF3 1484 aa22.64■■□□□ 1.21
PRRC2B-204ENST00000422467 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
PRRC2B-204ENST00000422467 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
PRRC2B-204ENST00000422467 SMARCA2P51531 1590 aa22.33■■□□□ 1.16
PRRC2B-204ENST00000422467 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
PRRC2B-204ENST00000422467 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
PRRC2B-204ENST00000422467 MROH2BQ7Z745 1585 aa22.22■■□□□ 1.15
PRRC2B-204ENST00000422467 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
PRRC2B-204ENST00000422467 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
PRRC2B-204ENST00000422467 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
PRRC2B-204ENST00000422467 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
PRRC2B-204ENST00000422467 WIZO95785 1651 aa21.99■■□□□ 1.11
PRRC2B-204ENST00000422467 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
PRRC2B-204ENST00000422467 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
PRRC2B-204ENST00000422467 LAMC3Q9Y6N6 1575 aa21.72■■□□□ 1.07
PRRC2B-204ENST00000422467 NESP48681 1621 aa21.72■■□□□ 1.07
PRRC2B-204ENST00000422467 CADPSQ9ULU8 1353 aa21.7■■□□□ 1.06
PRRC2B-204ENST00000422467 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
PRRC2B-204ENST00000422467 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
PRRC2B-204ENST00000422467 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
PRRC2B-204ENST00000422467 CFTRP13569 1480 aa21.51■■□□□ 1.03
PRRC2B-204ENST00000422467 CUX2O14529 1486 aa21.49■■□□□ 1.03
PRRC2B-204ENST00000422467 KIF21AQ7Z4S6 1674 aa21.45■■□□□ 1.02
PRRC2B-204ENST00000422467 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
PRRC2B-204ENST00000422467 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
PRRC2B-204ENST00000422467 MRC2Q9UBG0 1479 aa21.37■■□□□ 1.01
PRRC2B-204ENST00000422467 THOC2Q8NI27 1593 aaKnown RBP21.34■■□□□ 1.01
PRRC2B-204ENST00000422467 PRDM2Q13029 1718 aa21.31■■□□□ 1
PRRC2B-204ENST00000422467 WDR62O43379 1518 aa21.24■□□□□ 0.99
PRRC2B-204ENST00000422467 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
PRRC2B-204ENST00000422467 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.97
PRRC2B-204ENST00000422467 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
PRRC2B-204ENST00000422467 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
PRRC2B-204ENST00000422467 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
PRRC2B-204ENST00000422467 SOGA1O94964 1423 aa20.87■□□□□ 0.93
PRRC2B-204ENST00000422467 POLA1P09884 1462 aaPredicted RBP20.87■□□□□ 0.93
PRRC2B-204ENST00000422467 DNAJC5Q9H3Z4 198 aa20.85■□□□□ 0.93
PRRC2B-204ENST00000422467 CUX1P39880 1505 aa20.84■□□□□ 0.93
PRRC2B-204ENST00000422467 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
PRRC2B-204ENST00000422467 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
PRRC2B-204ENST00000422467 ZNF608Q9ULD9 1512 aaPredicted RBP20.79■□□□□ 0.92
PRRC2B-204ENST00000422467 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
PRRC2B-204ENST00000422467 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
PRRC2B-204ENST00000422467 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.917e-7■■■■■ 48.3
PRRC2B-204ENST00000422467 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
PRRC2B-204ENST00000422467 OSCARQ8IYS5 282 aa20.72■□□□□ 0.91
PRRC2B-204ENST00000422467 EIF4G3O43432 1585 aaKnown RBP20.72■□□□□ 0.91
PRRC2B-204ENST00000422467 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
PRRC2B-204ENST00000422467 FBLN2P98095 1184 aa20.69■□□□□ 0.9
PRRC2B-204ENST00000422467 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
PRRC2B-204ENST00000422467 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
PRRC2B-204ENST00000422467 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
PRRC2B-204ENST00000422467 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
PRRC2B-204ENST00000422467 GRIN2BQ13224 1484 aa20.61■□□□□ 0.89
PRRC2B-204ENST00000422467 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
PRRC2B-204ENST00000422467 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
PRRC2B-204ENST00000422467 SNAPC4Q5SXM2 1469 aa20.54■□□□□ 0.88
PRRC2B-204ENST00000422467 MAGI1Q96QZ7 1491 aaPredicted RBP20.54■□□□□ 0.88
PRRC2B-204ENST00000422467 TRIM41Q8WV44 630 aa20.48■□□□□ 0.87
PRRC2B-204ENST00000422467 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
PRRC2B-204ENST00000422467 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
PRRC2B-204ENST00000422467 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
PRRC2B-204ENST00000422467 CHD1O14646 1710 aa20.45■□□□□ 0.86
PRRC2B-204ENST00000422467 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
PRRC2B-204ENST00000422467 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
PRRC2B-204ENST00000422467 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
PRRC2B-204ENST00000422467 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
PRRC2B-204ENST00000422467 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
PRRC2B-204ENST00000422467 IGF1RP08069 1367 aa20.27■□□□□ 0.84
PRRC2B-204ENST00000422467 CUL7Q14999 1698 aa20.22■□□□□ 0.83
PRRC2B-204ENST00000422467 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
PRRC2B-204ENST00000422467 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
PRRC2B-204ENST00000422467 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
PRRC2B-204ENST00000422467 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
PRRC2B-204ENST00000422467 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
PRRC2B-204ENST00000422467 CLASP1Q7Z460 1538 aa20.2■□□□□ 0.82
PRRC2B-204ENST00000422467 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
PRRC2B-204ENST00000422467 NUP160Q12769 1436 aa20.18■□□□□ 0.82
PRRC2B-204ENST00000422467 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
PRRC2B-204ENST00000422467 JPH4Q96JJ6 628 aa20.11■□□□□ 0.81
PRRC2B-204ENST00000422467 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
PRRC2B-204ENST00000422467 RUSC2Q8N2Y8 1516 aa20.09■□□□□ 0.81
PRRC2B-204ENST00000422467 RAPGEF2Q9Y4G8 1499 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms