RNA–Protein interactions for RNA: ENST00000422297.5

NEK6-206, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-206ENST00000422297 NISCHQ9Y2I1 1504 aa35.6■■■■□ 3.29
NEK6-206ENST00000422297 ABCC9O60706 1549 aa32.18■■■□□ 2.74
NEK6-206ENST00000422297 CCDC180Q9P1Z9 1646 aa31.91■■■□□ 2.7
NEK6-206ENST00000422297 RB1CC1Q8TDY2 1594 aa30.51■■■□□ 2.47
NEK6-206ENST00000422297 DNAJC5BQ9UF47 199 aa30.49■■■□□ 2.47
NEK6-206ENST00000422297 NACADO15069 1562 aa30.29■■■□□ 2.44
NEK6-206ENST00000422297 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
NEK6-206ENST00000422297 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
NEK6-206ENST00000422297 MYO15BQ96JP2 1530 aa29.87■■■□□ 2.37
NEK6-206ENST00000422297 UNC13AQ9UPW8 1703 aa29.72■■■□□ 2.35
NEK6-206ENST00000422297 BICRAQ9NZM4 1560 aa29.68■■■□□ 2.34
NEK6-206ENST00000422297 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
NEK6-206ENST00000422297 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
NEK6-206ENST00000422297 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.27
NEK6-206ENST00000422297 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
NEK6-206ENST00000422297 CC2D2AQ9P2K1 1620 aa29.03■■■□□ 2.24
NEK6-206ENST00000422297 CECR2Q9BXF3 1484 aa29.02■■■□□ 2.24
NEK6-206ENST00000422297 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
NEK6-206ENST00000422297 DNAJC5Q9H3Z4 198 aa28.11■■■□□ 2.09
NEK6-206ENST00000422297 NCAPD3P42695 1498 aa28.04■■■□□ 2.08
NEK6-206ENST00000422297 ATAD2BQ9ULI0 1458 aa27.9■■■□□ 2.06
NEK6-206ENST00000422297 CUX2O14529 1486 aa27.82■■■□□ 2.04
NEK6-206ENST00000422297 ERCC6Q03468 1493 aa27.76■■■□□ 2.04
NEK6-206ENST00000422297 SMARCA2P51531 1590 aa27.75■■■□□ 2.03
NEK6-206ENST00000422297 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
NEK6-206ENST00000422297 HMGXB3Q12766 1538 aa27.73■■■□□ 2.03
NEK6-206ENST00000422297 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
NEK6-206ENST00000422297 NESP48681 1621 aa27.6■■■□□ 2.01
NEK6-206ENST00000422297 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
NEK6-206ENST00000422297 PEG3Q9GZU2 1588 aa27.53■■■□□ 2
NEK6-206ENST00000422297 MROH2BQ7Z745 1585 aa27.43■■□□□ 1.98
NEK6-206ENST00000422297 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
NEK6-206ENST00000422297 THOC2Q8NI27 1593 aaKnown RBP27.31■■□□□ 1.96
NEK6-206ENST00000422297 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
NEK6-206ENST00000422297 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
NEK6-206ENST00000422297 KIF21AQ7Z4S6 1674 aa27.12■■□□□ 1.93
NEK6-206ENST00000422297 WIZO95785 1651 aa27.02■■□□□ 1.92
NEK6-206ENST00000422297 MRC2Q9UBG0 1479 aa26.99■■□□□ 1.91
NEK6-206ENST00000422297 WDR62O43379 1518 aa26.92■■□□□ 1.9
NEK6-206ENST00000422297 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
NEK6-206ENST00000422297 CEP164Q9UPV0 1460 aa26.83■■□□□ 1.89
NEK6-206ENST00000422297 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
NEK6-206ENST00000422297 CFTRP13569 1480 aa26.81■■□□□ 1.88
NEK6-206ENST00000422297 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
NEK6-206ENST00000422297 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
NEK6-206ENST00000422297 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
NEK6-206ENST00000422297 OSCARQ8IYS5 282 aa26.59■■□□□ 1.85
NEK6-206ENST00000422297 CCDC88BA6NC98 1476 aa26.45■■□□□ 1.82
NEK6-206ENST00000422297 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
NEK6-206ENST00000422297 ZNF608Q9ULD9 1512 aaPredicted RBP26.33■■□□□ 1.81
NEK6-206ENST00000422297 PRDM2Q13029 1718 aa26.31■■□□□ 1.8
NEK6-206ENST00000422297 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
NEK6-206ENST00000422297 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
NEK6-206ENST00000422297 RIMBP3CA6NJZ7 1639 aa26.14■■□□□ 1.77
NEK6-206ENST00000422297 RIMBP3BA6NNM3 1639 aa26.14■■□□□ 1.77
NEK6-206ENST00000422297 RIMBP3Q9UFD9 1639 aa26.14■■□□□ 1.77
NEK6-206ENST00000422297 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
NEK6-206ENST00000422297 ARHGEF11O15085 1522 aa26.08■■□□□ 1.77
NEK6-206ENST00000422297 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
NEK6-206ENST00000422297 AQRO60306 1485 aaKnown RBP eCLIP26.07■■□□□ 1.762e-7■□□□□ 10.1
NEK6-206ENST00000422297 TARBP1Q13395 1621 aaKnown RBP26.04■■□□□ 1.76
NEK6-206ENST00000422297 POLA1P09884 1462 aaPredicted RBP26.01■■□□□ 1.75
NEK6-206ENST00000422297 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
NEK6-206ENST00000422297 RAD54L2Q9Y4B4 1467 aa25.93■■□□□ 1.74
NEK6-206ENST00000422297 SOGA1O94964 1423 aa25.92■■□□□ 1.74
NEK6-206ENST00000422297 FBLN2P98095 1184 aa25.92■■□□□ 1.74
NEK6-206ENST00000422297 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
NEK6-206ENST00000422297 CHD1O14646 1710 aa25.87■■□□□ 1.73
NEK6-206ENST00000422297 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
NEK6-206ENST00000422297 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
NEK6-206ENST00000422297 CUX1P39880 1505 aa25.77■■□□□ 1.72
NEK6-206ENST00000422297 SNAPC4Q5SXM2 1469 aa25.76■■□□□ 1.71
NEK6-206ENST00000422297 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
NEK6-206ENST00000422297 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
NEK6-206ENST00000422297 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
NEK6-206ENST00000422297 MAGI1Q96QZ7 1491 aaPredicted RBP25.69■■□□□ 1.7
NEK6-206ENST00000422297 TRHP20396 242 aaPredicted RBP25.68■■□□□ 1.7
NEK6-206ENST00000422297 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
NEK6-206ENST00000422297 SYNJ2O15056 1496 aa25.62■■□□□ 1.69
NEK6-206ENST00000422297 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
NEK6-206ENST00000422297 GAPVD1Q14C86 1478 aa25.57■■□□□ 1.68
NEK6-206ENST00000422297 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
NEK6-206ENST00000422297 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
NEK6-206ENST00000422297 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.66
NEK6-206ENST00000422297 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
NEK6-206ENST00000422297 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.66
NEK6-206ENST00000422297 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
NEK6-206ENST00000422297 NUP160Q12769 1436 aa25.3■■□□□ 1.64
NEK6-206ENST00000422297 TOP2BQ02880 1626 aa25.27■■□□□ 1.64
NEK6-206ENST00000422297 ERCC6L2Q5T890 1561 aa25.27■■□□□ 1.64
NEK6-206ENST00000422297 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
NEK6-206ENST00000422297 ADAMTS12P58397 1594 aa25.26■■□□□ 1.63
NEK6-206ENST00000422297 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
NEK6-206ENST00000422297 CEP170Q5SW79 1584 aa25.24■■□□□ 1.63
NEK6-206ENST00000422297 ERICH3Q5RHP9 1530 aa25.18■■□□□ 1.62
NEK6-206ENST00000422297 SHROOM2Q13796 1616 aa25.15■■□□□ 1.62
NEK6-206ENST00000422297 JPH4Q96JJ6 628 aa25.09■■□□□ 1.61
NEK6-206ENST00000422297 PRG4Q92954 1404 aaPredicted RBP25.06■■□□□ 1.6
NEK6-206ENST00000422297 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
NEK6-206ENST00000422297 IGF1RP08069 1367 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms