RNA–Protein interactions for RNA: ENST00000421589.5

CAP1-211, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 2

Gene CAP1, Length 824 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-211ENST00000421589 NISCHQ9Y2I1 1504 aa40.37■■■■■ 4.05
CAP1-211ENST00000421589 CCDC180Q9P1Z9 1646 aa36.09■■■■□ 3.37
CAP1-211ENST00000421589 ABCC9O60706 1549 aa36.01■■■■□ 3.36
CAP1-211ENST00000421589 RB1CC1Q8TDY2 1594 aa34.3■■■■□ 3.08
CAP1-211ENST00000421589 NACADO15069 1562 aa34.11■■■■□ 3.05
CAP1-211ENST00000421589 DCAF8L2P0C7V8 631 aa34.1■■■■□ 3.05
CAP1-211ENST00000421589 MYO15BQ96JP2 1530 aa33.68■■■□□ 2.98
CAP1-211ENST00000421589 DNAJC5BQ9UF47 199 aa33.66■■■□□ 2.98
CAP1-211ENST00000421589 PABPN1Q86U42 306 aaKnown RBP eCLIP33.59■■■□□ 2.97
CAP1-211ENST00000421589 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
CAP1-211ENST00000421589 ZCCHC6Q5VYS8 1495 aaKnown RBP33.48■■■□□ 2.95
CAP1-211ENST00000421589 DCAF1Q9Y4B6 1507 aa33.32■■■□□ 2.92
CAP1-211ENST00000421589 BICRAQ9NZM4 1560 aa33.3■■■□□ 2.92
CAP1-211ENST00000421589 SCRIBQ14160 1630 aa32.95■■■□□ 2.87
CAP1-211ENST00000421589 SHROOM4Q9ULL8 1493 aa32.82■■■□□ 2.84
CAP1-211ENST00000421589 CC2D2AQ9P2K1 1620 aa32.51■■■□□ 2.79
CAP1-211ENST00000421589 EIF4G1Q04637 1599 aaKnown RBP32.47■■■□□ 2.79
CAP1-211ENST00000421589 CECR2Q9BXF3 1484 aa32.41■■■□□ 2.78
CAP1-211ENST00000421589 NCAPD3P42695 1498 aa31.51■■■□□ 2.63
CAP1-211ENST00000421589 ATAD2BQ9ULI0 1458 aa31.45■■■□□ 2.62
CAP1-211ENST00000421589 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
CAP1-211ENST00000421589 SMARCA2P51531 1590 aa31.34■■■□□ 2.61
CAP1-211ENST00000421589 BAZ1AQ9NRL2 1556 aaPredicted RBP31.31■■■□□ 2.6
CAP1-211ENST00000421589 HMGXB3Q12766 1538 aa31.26■■■□□ 2.59
CAP1-211ENST00000421589 BAZ1BQ9UIG0 1483 aaKnown RBP31.14■■■□□ 2.58
CAP1-211ENST00000421589 MROH2BQ7Z745 1585 aa31.12■■■□□ 2.57
CAP1-211ENST00000421589 PEG3Q9GZU2 1588 aa31.11■■■□□ 2.57
CAP1-211ENST00000421589 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
CAP1-211ENST00000421589 NESP48681 1621 aa30.98■■■□□ 2.55
CAP1-211ENST00000421589 CUX2O14529 1486 aa30.92■■■□□ 2.54
CAP1-211ENST00000421589 WIZO95785 1651 aa30.75■■■□□ 2.51
CAP1-211ENST00000421589 DNAJC5Q9H3Z4 198 aa30.75■■■□□ 2.51
CAP1-211ENST00000421589 LAMC3Q9Y6N6 1575 aa30.75■■■□□ 2.51
CAP1-211ENST00000421589 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
CAP1-211ENST00000421589 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
CAP1-211ENST00000421589 CADPSQ9ULU8 1353 aa30.58■■■□□ 2.49
CAP1-211ENST00000421589 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
CAP1-211ENST00000421589 RSF1Q96T23 1441 aaPredicted RBP30.55■■■□□ 2.48
CAP1-211ENST00000421589 TOP2AP11388 1531 aaKnown RBP30.36■■■□□ 2.45
CAP1-211ENST00000421589 MRC2Q9UBG0 1479 aa30.31■■■□□ 2.44
CAP1-211ENST00000421589 CFTRP13569 1480 aa30.25■■■□□ 2.43
CAP1-211ENST00000421589 CEP164Q9UPV0 1460 aa30.23■■■□□ 2.43
CAP1-211ENST00000421589 FANCD2Q9BXW9 1451 aa30.22■■■□□ 2.43
CAP1-211ENST00000421589 WDR62O43379 1518 aa30.22■■■□□ 2.43
CAP1-211ENST00000421589 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
CAP1-211ENST00000421589 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
CAP1-211ENST00000421589 PRDM2Q13029 1718 aa29.9■■■□□ 2.38
CAP1-211ENST00000421589 TOPBP1Q92547 1522 aa29.66■■■□□ 2.34
CAP1-211ENST00000421589 IFT140Q96RY7 1462 aa29.61■■■□□ 2.33
CAP1-211ENST00000421589 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
CAP1-211ENST00000421589 ABCC8Q09428 1581 aa29.6■■■□□ 2.33
CAP1-211ENST00000421589 ZNF608Q9ULD9 1512 aaPredicted RBP29.57■■■□□ 2.32
CAP1-211ENST00000421589 DNMBPQ6XZF7 1577 aa29.56■■■□□ 2.32
CAP1-211ENST00000421589 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
CAP1-211ENST00000421589 SUPT5HO00267 1087 aaKnown RBP29.39■■■□□ 2.3
CAP1-211ENST00000421589 EIF4G3O43432 1585 aaKnown RBP29.38■■■□□ 2.29
CAP1-211ENST00000421589 TARBP1Q13395 1621 aaKnown RBP29.38■■■□□ 2.29
CAP1-211ENST00000421589 POLA1P09884 1462 aaPredicted RBP29.37■■■□□ 2.29
CAP1-211ENST00000421589 AQRO60306 1485 aaKnown RBP eCLIP29.35■■■□□ 2.291e-6■■■■□ 24.9
CAP1-211ENST00000421589 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
CAP1-211ENST00000421589 SOGA1O94964 1423 aa29.28■■■□□ 2.28
CAP1-211ENST00000421589 CUX1P39880 1505 aa29.22■■■□□ 2.27
CAP1-211ENST00000421589 FGD5Q6ZNL6 1462 aa29.22■■■□□ 2.27
CAP1-211ENST00000421589 TDRD9Q8NDG6 1382 aaKnown RBP29.2■■■□□ 2.26
CAP1-211ENST00000421589 FBLN2P98095 1184 aa29.15■■■□□ 2.26
CAP1-211ENST00000421589 RIMBP3CA6NJZ7 1639 aa29.14■■■□□ 2.26
CAP1-211ENST00000421589 RIMBP3BA6NNM3 1639 aa29.14■■■□□ 2.26
CAP1-211ENST00000421589 RIMBP3Q9UFD9 1639 aa29.14■■■□□ 2.26
CAP1-211ENST00000421589 CHD1O14646 1710 aa29.13■■■□□ 2.25
CAP1-211ENST00000421589 ARHGEF11O15085 1522 aa29.07■■■□□ 2.24
CAP1-211ENST00000421589 WDR97A6NE52 1622 aa29.05■■■□□ 2.24
CAP1-211ENST00000421589 SNAPC4Q5SXM2 1469 aa29.03■■■□□ 2.24
CAP1-211ENST00000421589 GRIN2BQ13224 1484 aa28.97■■■□□ 2.23
CAP1-211ENST00000421589 CHMP7Q8WUX9 453 aaPredicted RBP28.95■■■□□ 2.22
CAP1-211ENST00000421589 MAGI1Q96QZ7 1491 aaPredicted RBP28.93■■■□□ 2.22
CAP1-211ENST00000421589 CYB5RLQ6IPT4 315 aa28.92■■■□□ 2.22
CAP1-211ENST00000421589 GAPVD1Q14C86 1478 aa28.9■■■□□ 2.22
CAP1-211ENST00000421589 ABCA10Q8WWZ4 1543 aa28.89■■■□□ 2.22
CAP1-211ENST00000421589 SYNJ2O15056 1496 aa28.85■■■□□ 2.21
CAP1-211ENST00000421589 PBRM1Q86U86 1689 aa28.83■■■□□ 2.21
CAP1-211ENST00000421589 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.22e-8■■■□□ 16.7
CAP1-211ENST00000421589 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
CAP1-211ENST00000421589 SYNJ1O43426 1573 aa28.8■■■□□ 2.2
CAP1-211ENST00000421589 CLASP1Q7Z460 1538 aa28.8■■■□□ 2.2
CAP1-211ENST00000421589 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
CAP1-211ENST00000421589 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
CAP1-211ENST00000421589 BIVM-ERCC5R4GMW8 1640 aa28.77■■■□□ 2.2
CAP1-211ENST00000421589 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
CAP1-211ENST00000421589 ADAMTS12P58397 1594 aa28.58■■■□□ 2.17
CAP1-211ENST00000421589 TRHP20396 242 aaPredicted RBP28.54■■■□□ 2.16
CAP1-211ENST00000421589 FHAD1B1AJZ9 1412 aa28.53■■■□□ 2.16
CAP1-211ENST00000421589 ERICH3Q5RHP9 1530 aa28.52■■■□□ 2.16
CAP1-211ENST00000421589 NUP160Q12769 1436 aa28.49■■■□□ 2.15
CAP1-211ENST00000421589 CEP170Q5SW79 1584 aa28.48■■■□□ 2.15
CAP1-211ENST00000421589 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
CAP1-211ENST00000421589 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
CAP1-211ENST00000421589 KIF27Q86VH2 1401 aa28.26■■■□□ 2.11
CAP1-211ENST00000421589 JPH4Q96JJ6 628 aa28.25■■■□□ 2.11
CAP1-211ENST00000421589 IGF1RP08069 1367 aa28.24■■■□□ 2.11
CAP1-211ENST00000421589 PRG4Q92954 1404 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms