RNA–Protein interactions for RNA: ENST00000420967.5

RFC5-202, Transcript of replication factor C subunit 5, humanhuman

TSL 3

Gene RFC5, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-202ENST00000420967 NISCHQ9Y2I1 1504 aa40.69■■■■■ 4.1
RFC5-202ENST00000420967 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
RFC5-202ENST00000420967 ABCC9O60706 1549 aa36.16■■■■□ 3.38
RFC5-202ENST00000420967 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.11
RFC5-202ENST00000420967 DCAF8L2P0C7V8 631 aa34.31■■■■□ 3.08
RFC5-202ENST00000420967 NACADO15069 1562 aa34.28■■■■□ 3.08
RFC5-202ENST00000420967 MYO15BQ96JP2 1530 aa33.89■■■■□ 3.02
RFC5-202ENST00000420967 ZCCHC6Q5VYS8 1495 aaKnown RBP33.79■■■■□ 3
RFC5-202ENST00000420967 PABPN1Q86U42 306 aaKnown RBP eCLIP33.75■■■□□ 2.99
RFC5-202ENST00000420967 DNAJC5BQ9UF47 199 aa33.69■■■□□ 2.98
RFC5-202ENST00000420967 UNC13AQ9UPW8 1703 aa33.68■■■□□ 2.98
RFC5-202ENST00000420967 DCAF1Q9Y4B6 1507 aa33.58■■■□□ 2.97
RFC5-202ENST00000420967 BICRAQ9NZM4 1560 aa33.49■■■□□ 2.95
RFC5-202ENST00000420967 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
RFC5-202ENST00000420967 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
RFC5-202ENST00000420967 EIF4G1Q04637 1599 aaKnown RBP32.64■■■□□ 2.82
RFC5-202ENST00000420967 CC2D2AQ9P2K1 1620 aa32.63■■■□□ 2.81
RFC5-202ENST00000420967 CECR2Q9BXF3 1484 aa32.51■■■□□ 2.79
RFC5-202ENST00000420967 SMARCA4P51532 1647 aa31.67■■■□□ 2.66
RFC5-202ENST00000420967 NCAPD3P42695 1498 aa31.67■■■□□ 2.66
RFC5-202ENST00000420967 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
RFC5-202ENST00000420967 BAZ1AQ9NRL2 1556 aaPredicted RBP31.55■■■□□ 2.64
RFC5-202ENST00000420967 SMARCA2P51531 1590 aa31.53■■■□□ 2.64
RFC5-202ENST00000420967 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
RFC5-202ENST00000420967 MROH2BQ7Z745 1585 aa31.4■■■□□ 2.62
RFC5-202ENST00000420967 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
RFC5-202ENST00000420967 PEG3Q9GZU2 1588 aa31.33■■■□□ 2.61
RFC5-202ENST00000420967 ERCC6Q03468 1493 aa31.17■■■□□ 2.58
RFC5-202ENST00000420967 NESP48681 1621 aa31.16■■■□□ 2.58
RFC5-202ENST00000420967 WIZO95785 1651 aa31.03■■■□□ 2.56
RFC5-202ENST00000420967 CUX2O14529 1486 aa30.96■■■□□ 2.55
RFC5-202ENST00000420967 LAMC3Q9Y6N6 1575 aa30.89■■■□□ 2.54
RFC5-202ENST00000420967 RSF1Q96T23 1441 aaPredicted RBP30.85■■■□□ 2.53
RFC5-202ENST00000420967 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
RFC5-202ENST00000420967 PDS5BQ9NTI5 1447 aa30.73■■■□□ 2.51
RFC5-202ENST00000420967 THOC2Q8NI27 1593 aaKnown RBP30.72■■■□□ 2.51
RFC5-202ENST00000420967 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
RFC5-202ENST00000420967 DNAJC5Q9H3Z4 198 aa30.65■■■□□ 2.5
RFC5-202ENST00000420967 TOP2AP11388 1531 aaKnown RBP30.62■■■□□ 2.49
RFC5-202ENST00000420967 CFTRP13569 1480 aa30.45■■■□□ 2.47
RFC5-202ENST00000420967 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.47
RFC5-202ENST00000420967 FANCD2Q9BXW9 1451 aa30.41■■■□□ 2.46
RFC5-202ENST00000420967 CEP164Q9UPV0 1460 aa30.4■■■□□ 2.46
RFC5-202ENST00000420967 WDR62O43379 1518 aa30.37■■■□□ 2.45
RFC5-202ENST00000420967 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
RFC5-202ENST00000420967 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
RFC5-202ENST00000420967 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
RFC5-202ENST00000420967 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
RFC5-202ENST00000420967 IFT140Q96RY7 1462 aa29.77■■■□□ 2.36
RFC5-202ENST00000420967 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
RFC5-202ENST00000420967 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
RFC5-202ENST00000420967 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
RFC5-202ENST00000420967 ABCC8Q09428 1581 aa29.75■■■□□ 2.35
RFC5-202ENST00000420967 OSCARQ8IYS5 282 aa29.64■■■□□ 2.34
RFC5-202ENST00000420967 POLA1P09884 1462 aaPredicted RBP29.59■■■□□ 2.33
RFC5-202ENST00000420967 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
RFC5-202ENST00000420967 EIF4G3O43432 1585 aaKnown RBP29.56■■■□□ 2.32
RFC5-202ENST00000420967 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.321e-6■■■□□ 15.2
RFC5-202ENST00000420967 RAD54L2Q9Y4B4 1467 aa29.51■■■□□ 2.31
RFC5-202ENST00000420967 TRIM41Q8WV44 630 aa29.5■■■□□ 2.31
RFC5-202ENST00000420967 CUX1P39880 1505 aa29.47■■■□□ 2.31
RFC5-202ENST00000420967 SOGA1O94964 1423 aa29.45■■■□□ 2.31
RFC5-202ENST00000420967 FGD5Q6ZNL6 1462 aa29.45■■■□□ 2.31
RFC5-202ENST00000420967 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.3
RFC5-202ENST00000420967 FBLN2P98095 1184 aa29.28■■■□□ 2.28
RFC5-202ENST00000420967 CHD1O14646 1710 aa29.27■■■□□ 2.28
RFC5-202ENST00000420967 SNAPC4Q5SXM2 1469 aa29.22■■■□□ 2.27
RFC5-202ENST00000420967 RIMBP3CA6NJZ7 1639 aa29.21■■■□□ 2.27
RFC5-202ENST00000420967 RIMBP3BA6NNM3 1639 aa29.21■■■□□ 2.27
RFC5-202ENST00000420967 RIMBP3Q9UFD9 1639 aa29.21■■■□□ 2.27
RFC5-202ENST00000420967 WDR97A6NE52 1622 aa29.2■■■□□ 2.27
RFC5-202ENST00000420967 ARHGEF11O15085 1522 aa29.16■■■□□ 2.26
RFC5-202ENST00000420967 GRIN2BQ13224 1484 aa29.15■■■□□ 2.26
RFC5-202ENST00000420967 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
RFC5-202ENST00000420967 MAGI1Q96QZ7 1491 aaPredicted RBP29.1■■■□□ 2.25
RFC5-202ENST00000420967 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
RFC5-202ENST00000420967 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
RFC5-202ENST00000420967 CHMP7Q8WUX9 453 aaPredicted RBP29.08■■■□□ 2.25
RFC5-202ENST00000420967 SYNJ1O43426 1573 aa29.06■■■□□ 2.24
RFC5-202ENST00000420967 TOP2BQ02880 1626 aa29.04■■■□□ 2.24
RFC5-202ENST00000420967 PBRM1Q86U86 1689 aa29.03■■■□□ 2.24
RFC5-202ENST00000420967 ABCA5Q8WWZ7 1642 aa29.03■■■□□ 2.24
RFC5-202ENST00000420967 BIVM-ERCC5R4GMW8 1640 aa29.03■■■□□ 2.24
RFC5-202ENST00000420967 SYNJ2O15056 1496 aa29.02■■■□□ 2.24
RFC5-202ENST00000420967 CYB5RLQ6IPT4 315 aa28.97■■■□□ 2.23
RFC5-202ENST00000420967 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.23
RFC5-202ENST00000420967 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
RFC5-202ENST00000420967 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
RFC5-202ENST00000420967 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
RFC5-202ENST00000420967 FHAD1B1AJZ9 1412 aa28.73■■■□□ 2.19
RFC5-202ENST00000420967 ERICH3Q5RHP9 1530 aa28.72■■■□□ 2.19
RFC5-202ENST00000420967 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
RFC5-202ENST00000420967 NUP160Q12769 1436 aa28.67■■■□□ 2.18
RFC5-202ENST00000420967 ERCC6L2Q5T890 1561 aa28.58■■■□□ 2.17
RFC5-202ENST00000420967 TRHP20396 242 aaPredicted RBP28.55■■■□□ 2.16
RFC5-202ENST00000420967 KIF27Q86VH2 1401 aa28.5■■■□□ 2.15
RFC5-202ENST00000420967 IGF1RP08069 1367 aa28.48■■■□□ 2.15
RFC5-202ENST00000420967 SHROOM2Q13796 1616 aa28.47■■■□□ 2.15
RFC5-202ENST00000420967 PRG4Q92954 1404 aaPredicted RBP28.39■■■□□ 2.14
RFC5-202ENST00000420967 JPH4Q96JJ6 628 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms