RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 NISCHQ9Y2I1 1504 aa35.21■■■■□ 3.23
PTPN18-204ENST00000420717 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
PTPN18-204ENST00000420717 ABCC9O60706 1549 aa30.3■■■□□ 2.44
PTPN18-204ENST00000420717 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
PTPN18-204ENST00000420717 NACADO15069 1562 aa29.4■■■□□ 2.3
PTPN18-204ENST00000420717 MYO15BQ96JP2 1530 aa29.38■■■□□ 2.29
PTPN18-204ENST00000420717 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
PTPN18-204ENST00000420717 DCAF1Q9Y4B6 1507 aa29.27■■■□□ 2.28
PTPN18-204ENST00000420717 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
PTPN18-204ENST00000420717 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
PTPN18-204ENST00000420717 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
PTPN18-204ENST00000420717 SCRIBQ14160 1630 aa28.45■■■□□ 2.14
PTPN18-204ENST00000420717 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
PTPN18-204ENST00000420717 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.11
PTPN18-204ENST00000420717 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.03
PTPN18-204ENST00000420717 DNAJC5BQ9UF47 199 aa27.63■■■□□ 2.01
PTPN18-204ENST00000420717 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
PTPN18-204ENST00000420717 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
PTPN18-204ENST00000420717 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
PTPN18-204ENST00000420717 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
PTPN18-204ENST00000420717 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
PTPN18-204ENST00000420717 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
PTPN18-204ENST00000420717 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
PTPN18-204ENST00000420717 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
PTPN18-204ENST00000420717 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
PTPN18-204ENST00000420717 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
PTPN18-204ENST00000420717 BAZ1BQ9UIG0 1483 aaKnown RBP26.85■■□□□ 1.89
PTPN18-204ENST00000420717 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
PTPN18-204ENST00000420717 WIZO95785 1651 aa26.8■■□□□ 1.88
PTPN18-204ENST00000420717 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
PTPN18-204ENST00000420717 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
PTPN18-204ENST00000420717 NESP48681 1621 aa26.28■■□□□ 1.8
PTPN18-204ENST00000420717 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
PTPN18-204ENST00000420717 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
PTPN18-204ENST00000420717 CFTRP13569 1480 aa26.18■■□□□ 1.78
PTPN18-204ENST00000420717 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
PTPN18-204ENST00000420717 PDS5BQ9NTI5 1447 aa26.11■■□□□ 1.77
PTPN18-204ENST00000420717 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
PTPN18-204ENST00000420717 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
PTPN18-204ENST00000420717 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
PTPN18-204ENST00000420717 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
PTPN18-204ENST00000420717 CUX2O14529 1486 aa25.94■■□□□ 1.74
PTPN18-204ENST00000420717 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
PTPN18-204ENST00000420717 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
PTPN18-204ENST00000420717 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
PTPN18-204ENST00000420717 WDR62O43379 1518 aa25.85■■□□□ 1.73
PTPN18-204ENST00000420717 URB2Q14146 1524 aaKnown RBP25.7■■□□□ 1.7
PTPN18-204ENST00000420717 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
PTPN18-204ENST00000420717 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
PTPN18-204ENST00000420717 TOPBP1Q92547 1522 aa25.57■■□□□ 1.68
PTPN18-204ENST00000420717 CUX1P39880 1505 aa25.42■■□□□ 1.66
PTPN18-204ENST00000420717 IFT140Q96RY7 1462 aa25.39■■□□□ 1.65
PTPN18-204ENST00000420717 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
PTPN18-204ENST00000420717 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
PTPN18-204ENST00000420717 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
PTPN18-204ENST00000420717 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
PTPN18-204ENST00000420717 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
PTPN18-204ENST00000420717 WRNQ14191 1432 aaPredicted RBP eCLIP25.27■■□□□ 1.64
PTPN18-204ENST00000420717 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
PTPN18-204ENST00000420717 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
PTPN18-204ENST00000420717 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
PTPN18-204ENST00000420717 ZNF608Q9ULD9 1512 aaPredicted RBP25.2■■□□□ 1.62
PTPN18-204ENST00000420717 SOGA1O94964 1423 aa25.17■■□□□ 1.62
PTPN18-204ENST00000420717 RAD54L2Q9Y4B4 1467 aa25.16■■□□□ 1.62
PTPN18-204ENST00000420717 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
PTPN18-204ENST00000420717 ABCA5Q8WWZ7 1642 aa25.05■■□□□ 1.6
PTPN18-204ENST00000420717 AQRO60306 1485 aaKnown RBP eCLIP25.02■■□□□ 1.6
PTPN18-204ENST00000420717 TDRD9Q8NDG6 1382 aaKnown RBP24.97■■□□□ 1.59
PTPN18-204ENST00000420717 PBRM1Q86U86 1689 aa24.96■■□□□ 1.59
PTPN18-204ENST00000420717 GRIN2BQ13224 1484 aa24.94■■□□□ 1.58
PTPN18-204ENST00000420717 GAPVD1Q14C86 1478 aa24.93■■□□□ 1.58
PTPN18-204ENST00000420717 MAGI1Q96QZ7 1491 aaPredicted RBP24.91■■□□□ 1.58
PTPN18-204ENST00000420717 SNAPC4Q5SXM2 1469 aa24.86■■□□□ 1.57
PTPN18-204ENST00000420717 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
PTPN18-204ENST00000420717 CHD1O14646 1710 aa24.83■■□□□ 1.57
PTPN18-204ENST00000420717 DNAJC5Q9H3Z4 198 aa24.83■■□□□ 1.57
PTPN18-204ENST00000420717 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
PTPN18-204ENST00000420717 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
PTPN18-204ENST00000420717 KIF27Q86VH2 1401 aa24.73■■□□□ 1.55
PTPN18-204ENST00000420717 OSCARQ8IYS5 282 aa24.69■■□□□ 1.54
PTPN18-204ENST00000420717 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
PTPN18-204ENST00000420717 CUL7Q14999 1698 aa24.66■■□□□ 1.54
PTPN18-204ENST00000420717 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
PTPN18-204ENST00000420717 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
PTPN18-204ENST00000420717 IGF1RP08069 1367 aa24.59■■□□□ 1.53
PTPN18-204ENST00000420717 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
PTPN18-204ENST00000420717 CHMP7Q8WUX9 453 aaPredicted RBP24.57■■□□□ 1.52
PTPN18-204ENST00000420717 NUP160Q12769 1436 aa24.56■■□□□ 1.52
PTPN18-204ENST00000420717 FBLN2P98095 1184 aa24.52■■□□□ 1.52
PTPN18-204ENST00000420717 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
PTPN18-204ENST00000420717 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
PTPN18-204ENST00000420717 ARHGEF11O15085 1522 aa24.43■■□□□ 1.5
PTPN18-204ENST00000420717 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
PTPN18-204ENST00000420717 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
PTPN18-204ENST00000420717 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
PTPN18-204ENST00000420717 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
PTPN18-204ENST00000420717 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
PTPN18-204ENST00000420717 SHROOM2Q13796 1616 aa24.42■■□□□ 1.5
PTPN18-204ENST00000420717 EEA1Q15075 1411 aa24.41■■□□□ 1.5
PTPN18-204ENST00000420717 PRXQ9BXM0 1461 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms