RNA–Protein interactions for RNA: ENST00000420410.5

LPP-204, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-204ENST00000420410 NISCHQ9Y2I1 1504 aa46.51■■■■■ 5.04
LPP-204ENST00000420410 CCDC180Q9P1Z9 1646 aa41.31■■■■■ 4.2
LPP-204ENST00000420410 ABCC9O60706 1549 aa40.63■■■■■ 4.1
LPP-204ENST00000420410 DCAF8L2P0C7V8 631 aa39.04■■■■□ 3.84
LPP-204ENST00000420410 RB1CC1Q8TDY2 1594 aa38.96■■■■□ 3.83
LPP-204ENST00000420410 NACADO15069 1562 aa38.89■■■■□ 3.82
LPP-204ENST00000420410 ZCCHC6Q5VYS8 1495 aaKnown RBP38.73■■■■□ 3.79
LPP-204ENST00000420410 MYO15BQ96JP2 1530 aa38.58■■■■□ 3.77
LPP-204ENST00000420410 DCAF1Q9Y4B6 1507 aa38.41■■■■□ 3.74
LPP-204ENST00000420410 UNC13AQ9UPW8 1703 aa38.07■■■■□ 3.69
LPP-204ENST00000420410 PABPN1Q86U42 306 aaKnown RBP eCLIP38■■■■□ 3.67
LPP-204ENST00000420410 SCRIBQ14160 1630 aa37.81■■■■□ 3.64
LPP-204ENST00000420410 BICRAQ9NZM4 1560 aa37.8■■■■□ 3.64
LPP-204ENST00000420410 DNAJC5BQ9UF47 199 aa37.37■■■■□ 3.57
LPP-204ENST00000420410 SHROOM4Q9ULL8 1493 aa37.32■■■■□ 3.56
LPP-204ENST00000420410 EIF4G1Q04637 1599 aaKnown RBP36.82■■■■□ 3.48
LPP-204ENST00000420410 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
LPP-204ENST00000420410 CECR2Q9BXF3 1484 aa36.48■■■■□ 3.43
LPP-204ENST00000420410 SMARCA4P51532 1647 aa36.1■■■■□ 3.37
LPP-204ENST00000420410 BAZ1AQ9NRL2 1556 aaPredicted RBP36.04■■■■□ 3.36
LPP-204ENST00000420410 ATAD2BQ9ULI0 1458 aa35.94■■■■□ 3.34
LPP-204ENST00000420410 NCAPD3P42695 1498 aa35.9■■■■□ 3.34
LPP-204ENST00000420410 MROH2BQ7Z745 1585 aa35.88■■■■□ 3.33
LPP-204ENST00000420410 SMARCA2P51531 1590 aa35.86■■■■□ 3.33
LPP-204ENST00000420410 HMGXB3Q12766 1538 aa35.7■■■■□ 3.31
LPP-204ENST00000420410 PEG3Q9GZU2 1588 aa35.7■■■■□ 3.31
LPP-204ENST00000420410 BAZ1BQ9UIG0 1483 aaKnown RBP35.66■■■■□ 3.3
LPP-204ENST00000420410 WIZO95785 1651 aa35.49■■■■□ 3.27
LPP-204ENST00000420410 RSF1Q96T23 1441 aaPredicted RBP35.44■■■■□ 3.26
LPP-204ENST00000420410 NESP48681 1621 aa35.14■■■■□ 3.22
LPP-204ENST00000420410 TOP2AP11388 1531 aaKnown RBP35.07■■■■□ 3.21
LPP-204ENST00000420410 ERCC6Q03468 1493 aa35.02■■■■□ 3.2
LPP-204ENST00000420410 LAMC3Q9Y6N6 1575 aa34.96■■■■□ 3.19
LPP-204ENST00000420410 CADPSQ9ULU8 1353 aa34.88■■■■□ 3.17
LPP-204ENST00000420410 PDS5BQ9NTI5 1447 aa34.76■■■■□ 3.16
LPP-204ENST00000420410 CCDC88BA6NC98 1476 aa34.7■■■■□ 3.15
LPP-204ENST00000420410 KIF21AQ7Z4S6 1674 aa34.66■■■■□ 3.14
LPP-204ENST00000420410 CFTRP13569 1480 aa34.65■■■■□ 3.14
LPP-204ENST00000420410 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
LPP-204ENST00000420410 CUX2O14529 1486 aa34.59■■■■□ 3.13
LPP-204ENST00000420410 THOC2Q8NI27 1593 aaKnown RBP34.55■■■■□ 3.12
LPP-204ENST00000420410 FANCD2Q9BXW9 1451 aa34.5■■■■□ 3.11
LPP-204ENST00000420410 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
LPP-204ENST00000420410 MRC2Q9UBG0 1479 aa34.41■■■■□ 3.1
LPP-204ENST00000420410 PRDM2Q13029 1718 aa34.32■■■■□ 3.08
LPP-204ENST00000420410 WDR62O43379 1518 aa34.28■■■■□ 3.08
LPP-204ENST00000420410 URB2Q14146 1524 aaKnown RBP34.15■■■■□ 3.06
LPP-204ENST00000420410 TOPBP1Q92547 1522 aa33.93■■■■□ 3.02
LPP-204ENST00000420410 ABCC8Q09428 1581 aa33.87■■■■□ 3.01
LPP-204ENST00000420410 DNMBPQ6XZF7 1577 aa33.86■■■■□ 3.01
LPP-204ENST00000420410 IFT140Q96RY7 1462 aa33.72■■■□□ 2.99
LPP-204ENST00000420410 CUX1P39880 1505 aa33.66■■■□□ 2.98
LPP-204ENST00000420410 DNAJC5Q9H3Z4 198 aa33.66■■■□□ 2.98
LPP-204ENST00000420410 POLA1P09884 1462 aaPredicted RBP33.63■■■□□ 2.97
LPP-204ENST00000420410 ZNF608Q9ULD9 1512 aaPredicted RBP33.62■■■□□ 2.97
LPP-204ENST00000420410 FGD5Q6ZNL6 1462 aa33.56■■■□□ 2.96
LPP-204ENST00000420410 RAD54L2Q9Y4B4 1467 aa33.54■■■□□ 2.96
LPP-204ENST00000420410 TARBP1Q13395 1621 aaKnown RBP33.53■■■□□ 2.96
LPP-204ENST00000420410 SOGA1O94964 1423 aa33.52■■■□□ 2.96
LPP-204ENST00000420410 EIF4G3O43432 1585 aaKnown RBP33.44■■■□□ 2.94
LPP-204ENST00000420410 WRNQ14191 1432 aaPredicted RBP eCLIP33.43■■■□□ 2.94
LPP-204ENST00000420410 AQRO60306 1485 aaKnown RBP eCLIP33.43■■■□□ 2.94
LPP-204ENST00000420410 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
LPP-204ENST00000420410 SYNJ1O43426 1573 aa33.34■■■□□ 2.93
LPP-204ENST00000420410 TOP2BQ02880 1626 aa33.31■■■□□ 2.92
LPP-204ENST00000420410 BIVM-ERCC5R4GMW8 1640 aa33.29■■■□□ 2.92
LPP-204ENST00000420410 WDR97A6NE52 1622 aa33.22■■■□□ 2.91
LPP-204ENST00000420410 OSCARQ8IYS5 282 aa33.21■■■□□ 2.91
LPP-204ENST00000420410 ABCA10Q8WWZ4 1543 aa33.2■■■□□ 2.91
LPP-204ENST00000420410 GAPVD1Q14C86 1478 aa33.12■■■□□ 2.89
LPP-204ENST00000420410 GRIN2BQ13224 1484 aa33.11■■■□□ 2.89
LPP-204ENST00000420410 FBLN2P98095 1184 aa33.1■■■□□ 2.89
LPP-204ENST00000420410 SNAPC4Q5SXM2 1469 aa33.1■■■□□ 2.89
LPP-204ENST00000420410 ABCA5Q8WWZ7 1642 aa33.06■■■□□ 2.88
LPP-204ENST00000420410 CHD1O14646 1710 aa33.03■■■□□ 2.88
LPP-204ENST00000420410 PBRM1Q86U86 1689 aa33.02■■■□□ 2.88
LPP-204ENST00000420410 MAGI1Q96QZ7 1491 aaPredicted RBP33.01■■■□□ 2.88
LPP-204ENST00000420410 CHMP7Q8WUX9 453 aaPredicted RBP32.95■■■□□ 2.87
LPP-204ENST00000420410 SYNJ2O15056 1496 aa32.9■■■□□ 2.86
LPP-204ENST00000420410 ERICH3Q5RHP9 1530 aa32.79■■■□□ 2.84
LPP-204ENST00000420410 ADAMTS12P58397 1594 aa32.77■■■□□ 2.84
LPP-204ENST00000420410 FHAD1B1AJZ9 1412 aa32.72■■■□□ 2.83
LPP-204ENST00000420410 KIF27Q86VH2 1401 aa32.72■■■□□ 2.83
LPP-204ENST00000420410 GRIN2AQ12879 1464 aa32.69■■■□□ 2.82
LPP-204ENST00000420410 CLASP1Q7Z460 1538 aa32.67■■■□□ 2.82
LPP-204ENST00000420410 RIMBP3CA6NJZ7 1639 aa32.66■■■□□ 2.82
LPP-204ENST00000420410 RIMBP3BA6NNM3 1639 aa32.66■■■□□ 2.82
LPP-204ENST00000420410 RIMBP3Q9UFD9 1639 aa32.66■■■□□ 2.82
LPP-204ENST00000420410 ARHGEF11O15085 1522 aa32.66■■■□□ 2.82
LPP-204ENST00000420410 TRIM41Q8WV44 630 aa32.64■■■□□ 2.82
LPP-204ENST00000420410 IGF1RP08069 1367 aa32.6■■■□□ 2.81
LPP-204ENST00000420410 CEP170Q5SW79 1584 aa32.53■■■□□ 2.8
LPP-204ENST00000420410 NUP160Q12769 1436 aa32.53■■■□□ 2.8
LPP-204ENST00000420410 CUL7Q14999 1698 aa32.47■■■□□ 2.79
LPP-204ENST00000420410 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
LPP-204ENST00000420410 CYB5RLQ6IPT4 315 aa32.43■■■□□ 2.78
LPP-204ENST00000420410 CARMIL1Q5VZK9 1371 aa32.42■■■□□ 2.78
LPP-204ENST00000420410 ARAP1Q96P48 1450 aa32.41■■■□□ 2.78
LPP-204ENST00000420410 ERCC6L2Q5T890 1561 aa32.27■■■□□ 2.76
LPP-204ENST00000420410 SHROOM2Q13796 1616 aa32.26■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms