RNA–Protein interactions for RNA: ENST00000419774.5

PCGF3-203, Transcript of polycomb group ring finger 3, humanhuman

TSL 5

Gene PCGF3, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-203ENST00000419774 NISCHQ9Y2I1 1504 aa42.73■■■■■ 4.43
PCGF3-203ENST00000419774 ABCC9O60706 1549 aa38.6■■■■□ 3.77
PCGF3-203ENST00000419774 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
PCGF3-203ENST00000419774 RB1CC1Q8TDY2 1594 aa36.67■■■■□ 3.46
PCGF3-203ENST00000419774 DNAJC5BQ9UF47 199 aa36.4■■■■□ 3.42
PCGF3-203ENST00000419774 NACADO15069 1562 aa36.39■■■■□ 3.42
PCGF3-203ENST00000419774 DCAF8L2P0C7V8 631 aa36.1■■■■□ 3.37
PCGF3-203ENST00000419774 PABPN1Q86U42 306 aaKnown RBP eCLIP35.9■■■■□ 3.34
PCGF3-203ENST00000419774 UNC13AQ9UPW8 1703 aa35.9■■■■□ 3.34
PCGF3-203ENST00000419774 MYO15BQ96JP2 1530 aa35.83■■■■□ 3.33
PCGF3-203ENST00000419774 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
PCGF3-203ENST00000419774 ZCCHC6Q5VYS8 1495 aaKnown RBP35.37■■■■□ 3.25
PCGF3-203ENST00000419774 DCAF1Q9Y4B6 1507 aa35.3■■■■□ 3.24
PCGF3-203ENST00000419774 SHROOM4Q9ULL8 1493 aa35.13■■■■□ 3.21
PCGF3-203ENST00000419774 SCRIBQ14160 1630 aa35■■■■□ 3.19
PCGF3-203ENST00000419774 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
PCGF3-203ENST00000419774 CECR2Q9BXF3 1484 aa34.8■■■■□ 3.16
PCGF3-203ENST00000419774 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
PCGF3-203ENST00000419774 NCAPD3P42695 1498 aa33.59■■■□□ 2.97
PCGF3-203ENST00000419774 DNAJC5Q9H3Z4 198 aa33.56■■■□□ 2.96
PCGF3-203ENST00000419774 ATAD2BQ9ULI0 1458 aa33.45■■■□□ 2.95
PCGF3-203ENST00000419774 SMARCA4P51532 1647 aa33.39■■■□□ 2.93
PCGF3-203ENST00000419774 SMARCA2P51531 1590 aa33.36■■■□□ 2.93
PCGF3-203ENST00000419774 CUX2O14529 1486 aa33.36■■■□□ 2.93
PCGF3-203ENST00000419774 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
PCGF3-203ENST00000419774 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
PCGF3-203ENST00000419774 BAZ1AQ9NRL2 1556 aaPredicted RBP33.17■■■□□ 2.9
PCGF3-203ENST00000419774 NESP48681 1621 aa33.12■■■□□ 2.89
PCGF3-203ENST00000419774 BAZ1BQ9UIG0 1483 aaKnown RBP33.12■■■□□ 2.89
PCGF3-203ENST00000419774 PEG3Q9GZU2 1588 aa33.07■■■□□ 2.88
PCGF3-203ENST00000419774 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
PCGF3-203ENST00000419774 LAMC3Q9Y6N6 1575 aa32.86■■■□□ 2.85
PCGF3-203ENST00000419774 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
PCGF3-203ENST00000419774 KIF21AQ7Z4S6 1674 aa32.71■■■□□ 2.83
PCGF3-203ENST00000419774 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
PCGF3-203ENST00000419774 CADPSQ9ULU8 1353 aa32.55■■■□□ 2.8
PCGF3-203ENST00000419774 WIZO95785 1651 aa32.53■■■□□ 2.8
PCGF3-203ENST00000419774 MRC2Q9UBG0 1479 aa32.4■■■□□ 2.78
PCGF3-203ENST00000419774 WDR62O43379 1518 aa32.34■■■□□ 2.77
PCGF3-203ENST00000419774 CEP164Q9UPV0 1460 aa32.23■■■□□ 2.75
PCGF3-203ENST00000419774 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
PCGF3-203ENST00000419774 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
PCGF3-203ENST00000419774 CFTRP13569 1480 aa32.15■■■□□ 2.74
PCGF3-203ENST00000419774 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
PCGF3-203ENST00000419774 TRIM41Q8WV44 630 aa31.98■■■□□ 2.71
PCGF3-203ENST00000419774 URB2Q14146 1524 aaKnown RBP31.94■■■□□ 2.7
PCGF3-203ENST00000419774 PRDM2Q13029 1718 aa31.86■■■□□ 2.69
PCGF3-203ENST00000419774 OSCARQ8IYS5 282 aa31.8■■■□□ 2.68
PCGF3-203ENST00000419774 CCDC88BA6NC98 1476 aa31.73■■■□□ 2.67
PCGF3-203ENST00000419774 IFT140Q96RY7 1462 aa31.6■■■□□ 2.65
PCGF3-203ENST00000419774 ZNF608Q9ULD9 1512 aaPredicted RBP31.57■■■□□ 2.64
PCGF3-203ENST00000419774 TOPBP1Q92547 1522 aa31.56■■■□□ 2.64
PCGF3-203ENST00000419774 ABCC8Q09428 1581 aa31.47■■■□□ 2.63
PCGF3-203ENST00000419774 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
PCGF3-203ENST00000419774 RIMBP3CA6NJZ7 1639 aa31.42■■■□□ 2.62
PCGF3-203ENST00000419774 RIMBP3BA6NNM3 1639 aa31.42■■■□□ 2.62
PCGF3-203ENST00000419774 RIMBP3Q9UFD9 1639 aa31.42■■■□□ 2.62
PCGF3-203ENST00000419774 EIF4G3O43432 1585 aaKnown RBP31.39■■■□□ 2.62
PCGF3-203ENST00000419774 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
PCGF3-203ENST00000419774 ARHGEF11O15085 1522 aa31.29■■■□□ 2.6
PCGF3-203ENST00000419774 AQRO60306 1485 aaKnown RBP eCLIP31.26■■■□□ 2.594e-15■■■■■ 37.1
PCGF3-203ENST00000419774 CHD1O14646 1710 aa31.22■■■□□ 2.59
PCGF3-203ENST00000419774 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
PCGF3-203ENST00000419774 RAD54L2Q9Y4B4 1467 aa31.1■■■□□ 2.57
PCGF3-203ENST00000419774 SOGA1O94964 1423 aa31.07■■■□□ 2.56
PCGF3-203ENST00000419774 FBLN2P98095 1184 aa31.06■■■□□ 2.56
PCGF3-203ENST00000419774 CYB5RLQ6IPT4 315 aa31.06■■■□□ 2.56
PCGF3-203ENST00000419774 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
PCGF3-203ENST00000419774 FGD5Q6ZNL6 1462 aa31■■■□□ 2.55
PCGF3-203ENST00000419774 ARAP1Q96P48 1450 aa30.97■■■□□ 2.55
PCGF3-203ENST00000419774 WDR97A6NE52 1622 aa30.97■■■□□ 2.55
PCGF3-203ENST00000419774 CUX1P39880 1505 aa30.95■■■□□ 2.55
PCGF3-203ENST00000419774 SNAPC4Q5SXM2 1469 aa30.93■■■□□ 2.54
PCGF3-203ENST00000419774 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
PCGF3-203ENST00000419774 CLASP1Q7Z460 1538 aa30.84■■■□□ 2.53
PCGF3-203ENST00000419774 GRIN2BQ13224 1484 aa30.82■■■□□ 2.53
PCGF3-203ENST00000419774 CHMP7Q8WUX9 453 aaPredicted RBP30.81■■■□□ 2.52
PCGF3-203ENST00000419774 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
PCGF3-203ENST00000419774 TRHP20396 242 aaPredicted RBP30.75■■■□□ 2.51
PCGF3-203ENST00000419774 SYNJ2O15056 1496 aa30.75■■■□□ 2.51
PCGF3-203ENST00000419774 PBRM1Q86U86 1689 aa30.71■■■□□ 2.51
PCGF3-203ENST00000419774 GAPVD1Q14C86 1478 aa30.7■■■□□ 2.5
PCGF3-203ENST00000419774 ABCA10Q8WWZ4 1543 aa30.64■■■□□ 2.5
PCGF3-203ENST00000419774 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
PCGF3-203ENST00000419774 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.48
PCGF3-203ENST00000419774 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.476e-6■■■■■ 35.2
PCGF3-203ENST00000419774 GRIN2AQ12879 1464 aa30.43■■■□□ 2.46
PCGF3-203ENST00000419774 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
PCGF3-203ENST00000419774 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
PCGF3-203ENST00000419774 ADAMTS12P58397 1594 aa30.4■■■□□ 2.46
PCGF3-203ENST00000419774 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
PCGF3-203ENST00000419774 NUP160Q12769 1436 aa30.34■■■□□ 2.45
PCGF3-203ENST00000419774 CEP170Q5SW79 1584 aa30.33■■■□□ 2.45
PCGF3-203ENST00000419774 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
PCGF3-203ENST00000419774 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
PCGF3-203ENST00000419774 SHROOM2Q13796 1616 aa30.25■■■□□ 2.43
PCGF3-203ENST00000419774 PRG4Q92954 1404 aaPredicted RBP30.05■■■□□ 2.4
PCGF3-203ENST00000419774 JPH4Q96JJ6 628 aa30.02■■■□□ 2.4
PCGF3-203ENST00000419774 AEBP2Q6ZN18 517 aaPredicted RBP30■■■□□ 2.39
PCGF3-203ENST00000419774 RUSC2Q8N2Y8 1516 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms