RNA–Protein interactions for RNA: ENST00000419525.5

CENPA-203, Transcript of centromere protein A, humanhuman

TSL 5

Gene CENPA, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-203ENST00000419525 NISCHQ9Y2I1 1504 aa41.65■■■■■ 4.26
CENPA-203ENST00000419525 CCDC180Q9P1Z9 1646 aa37.46■■■■□ 3.59
CENPA-203ENST00000419525 ABCC9O60706 1549 aa37.34■■■■□ 3.57
CENPA-203ENST00000419525 RB1CC1Q8TDY2 1594 aa35.61■■■■□ 3.29
CENPA-203ENST00000419525 NACADO15069 1562 aa35.38■■■■□ 3.25
CENPA-203ENST00000419525 DCAF8L2P0C7V8 631 aa35.06■■■■□ 3.2
CENPA-203ENST00000419525 DNAJC5BQ9UF47 199 aa34.98■■■■□ 3.19
CENPA-203ENST00000419525 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
CENPA-203ENST00000419525 UNC13AQ9UPW8 1703 aa34.85■■■■□ 3.17
CENPA-203ENST00000419525 PABPN1Q86U42 306 aaKnown RBP eCLIP34.72■■■■□ 3.15
CENPA-203ENST00000419525 BICRAQ9NZM4 1560 aa34.57■■■■□ 3.12
CENPA-203ENST00000419525 ZCCHC6Q5VYS8 1495 aaKnown RBP34.53■■■■□ 3.12
CENPA-203ENST00000419525 DCAF1Q9Y4B6 1507 aa34.45■■■■□ 3.11
CENPA-203ENST00000419525 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
CENPA-203ENST00000419525 SCRIBQ14160 1630 aa34.06■■■■□ 3.04
CENPA-203ENST00000419525 CC2D2AQ9P2K1 1620 aa33.78■■■■□ 3
CENPA-203ENST00000419525 EIF4G1Q04637 1599 aaKnown RBP33.71■■■□□ 2.99
CENPA-203ENST00000419525 CECR2Q9BXF3 1484 aa33.66■■■□□ 2.98
CENPA-203ENST00000419525 NCAPD3P42695 1498 aa32.62■■■□□ 2.81
CENPA-203ENST00000419525 SMARCA4P51532 1647 aa32.52■■■□□ 2.8
CENPA-203ENST00000419525 ATAD2BQ9ULI0 1458 aa32.52■■■□□ 2.8
CENPA-203ENST00000419525 SMARCA2P51531 1590 aa32.47■■■□□ 2.79
CENPA-203ENST00000419525 HMGXB3Q12766 1538 aa32.42■■■□□ 2.78
CENPA-203ENST00000419525 BAZ1AQ9NRL2 1556 aaPredicted RBP32.36■■■□□ 2.77
CENPA-203ENST00000419525 ERCC6Q03468 1493 aa32.27■■■□□ 2.76
CENPA-203ENST00000419525 CUX2O14529 1486 aa32.24■■■□□ 2.75
CENPA-203ENST00000419525 PEG3Q9GZU2 1588 aa32.22■■■□□ 2.75
CENPA-203ENST00000419525 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
CENPA-203ENST00000419525 DNAJC5Q9H3Z4 198 aa32.17■■■□□ 2.74
CENPA-203ENST00000419525 NESP48681 1621 aa32.08■■■□□ 2.73
CENPA-203ENST00000419525 MROH2BQ7Z745 1585 aa32.08■■■□□ 2.73
CENPA-203ENST00000419525 LAMC3Q9Y6N6 1575 aa31.93■■■□□ 2.7
CENPA-203ENST00000419525 THOC2Q8NI27 1593 aaKnown RBP31.81■■■□□ 2.68
CENPA-203ENST00000419525 KIF21AQ7Z4S6 1674 aa31.74■■■□□ 2.67
CENPA-203ENST00000419525 WIZO95785 1651 aa31.72■■■□□ 2.67
CENPA-203ENST00000419525 PDS5BQ9NTI5 1447 aa31.71■■■□□ 2.67
CENPA-203ENST00000419525 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
CENPA-203ENST00000419525 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
CENPA-203ENST00000419525 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
CENPA-203ENST00000419525 WDR62O43379 1518 aa31.38■■■□□ 2.61
CENPA-203ENST00000419525 TOP2AP11388 1531 aaKnown RBP31.33■■■□□ 2.61
CENPA-203ENST00000419525 CEP164Q9UPV0 1460 aa31.32■■■□□ 2.6
CENPA-203ENST00000419525 CFTRP13569 1480 aa31.27■■■□□ 2.6
CENPA-203ENST00000419525 FANCD2Q9BXW9 1451 aa31.27■■■□□ 2.6
CENPA-203ENST00000419525 PRDM2Q13029 1718 aa31.07■■■□□ 2.56
CENPA-203ENST00000419525 URB2Q14146 1524 aaKnown RBP31.01■■■□□ 2.55
CENPA-203ENST00000419525 CCDC88BA6NC98 1476 aa30.94■■■□□ 2.54
CENPA-203ENST00000419525 OSCARQ8IYS5 282 aa30.72■■■□□ 2.51
CENPA-203ENST00000419525 TRIM41Q8WV44 630 aa30.72■■■□□ 2.51
CENPA-203ENST00000419525 IFT140Q96RY7 1462 aa30.7■■■□□ 2.5
CENPA-203ENST00000419525 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
CENPA-203ENST00000419525 ABCC8Q09428 1581 aa30.65■■■□□ 2.5
CENPA-203ENST00000419525 ZNF608Q9ULD9 1512 aaPredicted RBP30.61■■■□□ 2.49
CENPA-203ENST00000419525 DNMBPQ6XZF7 1577 aa30.6■■■□□ 2.49
CENPA-203ENST00000419525 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
CENPA-203ENST00000419525 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
CENPA-203ENST00000419525 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
CENPA-203ENST00000419525 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
CENPA-203ENST00000419525 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
CENPA-203ENST00000419525 POLA1P09884 1462 aaPredicted RBP30.36■■■□□ 2.45
CENPA-203ENST00000419525 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.441e-6■■■■□ 22.7
CENPA-203ENST00000419525 CHD1O14646 1710 aa30.29■■■□□ 2.44
CENPA-203ENST00000419525 ARHGEF11O15085 1522 aa30.26■■■□□ 2.43
CENPA-203ENST00000419525 RAD54L2Q9Y4B4 1467 aa30.23■■■□□ 2.43
CENPA-203ENST00000419525 SOGA1O94964 1423 aa30.21■■■□□ 2.43
CENPA-203ENST00000419525 WDR97A6NE52 1622 aa30.17■■■□□ 2.42
CENPA-203ENST00000419525 FGD5Q6ZNL6 1462 aa30.17■■■□□ 2.42
CENPA-203ENST00000419525 CUX1P39880 1505 aa30.15■■■□□ 2.42
CENPA-203ENST00000419525 TDRD9Q8NDG6 1382 aaKnown RBP30.13■■■□□ 2.41
CENPA-203ENST00000419525 FBLN2P98095 1184 aa30.09■■■□□ 2.41
CENPA-203ENST00000419525 SNAPC4Q5SXM2 1469 aa30.04■■■□□ 2.4
CENPA-203ENST00000419525 MAGI1Q96QZ7 1491 aaPredicted RBP29.99■■■□□ 2.39
CENPA-203ENST00000419525 CYB5RLQ6IPT4 315 aa29.97■■■□□ 2.39
CENPA-203ENST00000419525 GRIN2BQ13224 1484 aa29.97■■■□□ 2.39
CENPA-203ENST00000419525 ARAP1Q96P48 1450 aa29.95■■■□□ 2.39
CENPA-203ENST00000419525 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
CENPA-203ENST00000419525 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
CENPA-203ENST00000419525 CLASP1Q7Z460 1538 aa29.91■■■□□ 2.38
CENPA-203ENST00000419525 SYNJ1O43426 1573 aa29.91■■■□□ 2.38
CENPA-203ENST00000419525 CHMP7Q8WUX9 453 aaPredicted RBP29.9■■■□□ 2.38
CENPA-203ENST00000419525 SYNJ2O15056 1496 aa29.88■■■□□ 2.37
CENPA-203ENST00000419525 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
CENPA-203ENST00000419525 ABCA10Q8WWZ4 1543 aa29.85■■■□□ 2.37
CENPA-203ENST00000419525 ABCA5Q8WWZ7 1642 aa29.82■■■□□ 2.36
CENPA-203ENST00000419525 BIVM-ERCC5R4GMW8 1640 aa29.72■■■□□ 2.35
CENPA-203ENST00000419525 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
CENPA-203ENST00000419525 TOP2BQ02880 1626 aa29.7■■■□□ 2.34
CENPA-203ENST00000419525 TRHP20396 242 aaPredicted RBP29.64■■■□□ 2.34
CENPA-203ENST00000419525 ADAMTS12P58397 1594 aa29.6■■■□□ 2.33
CENPA-203ENST00000419525 GRIN2AQ12879 1464 aa29.59■■■□□ 2.33
CENPA-203ENST00000419525 NUP160Q12769 1436 aa29.49■■■□□ 2.31
CENPA-203ENST00000419525 ERICH3Q5RHP9 1530 aa29.49■■■□□ 2.31
CENPA-203ENST00000419525 CEP170Q5SW79 1584 aa29.48■■■□□ 2.31
CENPA-203ENST00000419525 FHAD1B1AJZ9 1412 aa29.48■■■□□ 2.31
CENPA-203ENST00000419525 ERCC6L2Q5T890 1561 aa29.41■■■□□ 2.3
CENPA-203ENST00000419525 SHROOM2Q13796 1616 aa29.39■■■□□ 2.3
CENPA-203ENST00000419525 RUSC2Q8N2Y8 1516 aa29.18■■■□□ 2.26
CENPA-203ENST00000419525 PRG4Q92954 1404 aaPredicted RBP29.18■■■□□ 2.26
CENPA-203ENST00000419525 JPH4Q96JJ6 628 aa29.15■■■□□ 2.26
CENPA-203ENST00000419525 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms