RNA–Protein interactions for RNA: ENST00000419057.5

TRAF2-203, Transcript of TNF receptor associated factor 2, humanhuman

TSL 3

Gene TRAF2, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF2-203ENST00000419057 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
TRAF2-203ENST00000419057 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
TRAF2-203ENST00000419057 ABCC9O60706 1549 aa30.85■■■□□ 2.53
TRAF2-203ENST00000419057 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
TRAF2-203ENST00000419057 NACADO15069 1562 aa29.29■■■□□ 2.28
TRAF2-203ENST00000419057 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
TRAF2-203ENST00000419057 MYO15BQ96JP2 1530 aa28.92■■■□□ 2.22
TRAF2-203ENST00000419057 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
TRAF2-203ENST00000419057 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
TRAF2-203ENST00000419057 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
TRAF2-203ENST00000419057 ZCCHC6Q5VYS8 1495 aaKnown RBP28.61■■■□□ 2.17
TRAF2-203ENST00000419057 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
TRAF2-203ENST00000419057 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
TRAF2-203ENST00000419057 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
TRAF2-203ENST00000419057 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
TRAF2-203ENST00000419057 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
TRAF2-203ENST00000419057 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
TRAF2-203ENST00000419057 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.04
TRAF2-203ENST00000419057 NCAPD3P42695 1498 aa27■■□□□ 1.91
TRAF2-203ENST00000419057 SMARCA4P51532 1647 aa26.91■■□□□ 1.9
TRAF2-203ENST00000419057 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
TRAF2-203ENST00000419057 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
TRAF2-203ENST00000419057 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
TRAF2-203ENST00000419057 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
TRAF2-203ENST00000419057 ERCC6Q03468 1493 aa26.7■■□□□ 1.87
TRAF2-203ENST00000419057 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
TRAF2-203ENST00000419057 PEG3Q9GZU2 1588 aa26.67■■□□□ 1.86
TRAF2-203ENST00000419057 CUX2O14529 1486 aa26.65■■□□□ 1.86
TRAF2-203ENST00000419057 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
TRAF2-203ENST00000419057 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
TRAF2-203ENST00000419057 NESP48681 1621 aa26.49■■□□□ 1.83
TRAF2-203ENST00000419057 LAMC3Q9Y6N6 1575 aa26.42■■□□□ 1.82
TRAF2-203ENST00000419057 PDS5BQ9NTI5 1447 aa26.27■■□□□ 1.8
TRAF2-203ENST00000419057 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
TRAF2-203ENST00000419057 WIZO95785 1651 aa26.22■■□□□ 1.79
TRAF2-203ENST00000419057 KIF21AQ7Z4S6 1674 aa26.2■■□□□ 1.78
TRAF2-203ENST00000419057 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
TRAF2-203ENST00000419057 RSF1Q96T23 1441 aaPredicted RBP26.03■■□□□ 1.76
TRAF2-203ENST00000419057 MRC2Q9UBG0 1479 aa26.02■■□□□ 1.76
TRAF2-203ENST00000419057 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
TRAF2-203ENST00000419057 WDR62O43379 1518 aa25.94■■□□□ 1.74
TRAF2-203ENST00000419057 CEP164Q9UPV0 1460 aa25.93■■□□□ 1.74
TRAF2-203ENST00000419057 CFTRP13569 1480 aa25.9■■□□□ 1.74
TRAF2-203ENST00000419057 FANCD2Q9BXW9 1451 aa25.89■■□□□ 1.73
TRAF2-203ENST00000419057 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
TRAF2-203ENST00000419057 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
TRAF2-203ENST00000419057 CCDC88BA6NC98 1476 aa25.61■■□□□ 1.69
TRAF2-203ENST00000419057 ABCC8Q09428 1581 aa25.42■■□□□ 1.66
TRAF2-203ENST00000419057 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
TRAF2-203ENST00000419057 OSCARQ8IYS5 282 aa25.4■■□□□ 1.66
TRAF2-203ENST00000419057 TOPBP1Q92547 1522 aa25.39■■□□□ 1.66
TRAF2-203ENST00000419057 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
TRAF2-203ENST00000419057 DNMBPQ6XZF7 1577 aa25.34■■□□□ 1.65
TRAF2-203ENST00000419057 ZNF608Q9ULD9 1512 aaPredicted RBP25.29■■□□□ 1.64
TRAF2-203ENST00000419057 EIF4G3O43432 1585 aaKnown RBP25.21■■□□□ 1.63
TRAF2-203ENST00000419057 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
TRAF2-203ENST00000419057 POLA1P09884 1462 aaPredicted RBP25.14■■□□□ 1.61
TRAF2-203ENST00000419057 AQRO60306 1485 aaKnown RBP eCLIP25.07■■□□□ 1.62e-9■■■■■ 63.3
TRAF2-203ENST00000419057 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
TRAF2-203ENST00000419057 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
TRAF2-203ENST00000419057 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
TRAF2-203ENST00000419057 SOGA1O94964 1423 aa25.02■■□□□ 1.6
TRAF2-203ENST00000419057 WDR97A6NE52 1622 aa25.01■■□□□ 1.59
TRAF2-203ENST00000419057 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
TRAF2-203ENST00000419057 CHD1O14646 1710 aa25■■□□□ 1.59
TRAF2-203ENST00000419057 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
TRAF2-203ENST00000419057 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
TRAF2-203ENST00000419057 CUX1P39880 1505 aa24.95■■□□□ 1.58
TRAF2-203ENST00000419057 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
TRAF2-203ENST00000419057 FBLN2P98095 1184 aa24.92■■□□□ 1.58
TRAF2-203ENST00000419057 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
TRAF2-203ENST00000419057 SNAPC4Q5SXM2 1469 aa24.86■■□□□ 1.57
TRAF2-203ENST00000419057 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
TRAF2-203ENST00000419057 GRIN2BQ13224 1484 aa24.83■■□□□ 1.57
TRAF2-203ENST00000419057 CHMP7Q8WUX9 453 aaPredicted RBP24.78■■□□□ 1.56
TRAF2-203ENST00000419057 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
TRAF2-203ENST00000419057 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
TRAF2-203ENST00000419057 SYNJ2O15056 1496 aa24.74■■□□□ 1.55
TRAF2-203ENST00000419057 GAPVD1Q14C86 1478 aa24.73■■□□□ 1.55
TRAF2-203ENST00000419057 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
TRAF2-203ENST00000419057 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
TRAF2-203ENST00000419057 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
TRAF2-203ENST00000419057 ABCA10Q8WWZ4 1543 aa24.72■■□□□ 1.55
TRAF2-203ENST00000419057 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
TRAF2-203ENST00000419057 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
TRAF2-203ENST00000419057 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
TRAF2-203ENST00000419057 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
TRAF2-203ENST00000419057 TRHP20396 242 aaPredicted RBP24.5■■□□□ 1.51
TRAF2-203ENST00000419057 GRIN2AQ12879 1464 aa24.5■■□□□ 1.51
TRAF2-203ENST00000419057 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
TRAF2-203ENST00000419057 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
TRAF2-203ENST00000419057 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
TRAF2-203ENST00000419057 NUP160Q12769 1436 aa24.41■■□□□ 1.5
TRAF2-203ENST00000419057 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
TRAF2-203ENST00000419057 SHROOM2Q13796 1616 aa24.29■■□□□ 1.48
TRAF2-203ENST00000419057 ERCC6L2Q5T890 1561 aa24.27■■□□□ 1.48
TRAF2-203ENST00000419057 PRG4Q92954 1404 aaPredicted RBP24.16■■□□□ 1.46
TRAF2-203ENST00000419057 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
TRAF2-203ENST00000419057 KIF27Q86VH2 1401 aa24.15■■□□□ 1.46
TRAF2-203ENST00000419057 JPH4Q96JJ6 628 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms