RNA–Protein interactions for RNA: ENST00000418994.1

CAPN7-203, Transcript of calpain 7, humanhuman

TSL 5

Gene CAPN7, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-203ENST00000418994 NISCHQ9Y2I1 1504 aa63.72■■■■■ 7.79
CAPN7-203ENST00000418994 CCDC180Q9P1Z9 1646 aa56.74■■■■■ 6.67
CAPN7-203ENST00000418994 ABCC9O60706 1549 aa55.77■■■■■ 6.52
CAPN7-203ENST00000418994 RB1CC1Q8TDY2 1594 aa53.53■■■■■ 6.16
CAPN7-203ENST00000418994 NACADO15069 1562 aa53.43■■■■■ 6.14
CAPN7-203ENST00000418994 DCAF8L2P0C7V8 631 aa53.34■■■■■ 6.13
CAPN7-203ENST00000418994 MYO15BQ96JP2 1530 aa53.03■■■■■ 6.08
CAPN7-203ENST00000418994 ZCCHC6Q5VYS8 1495 aaKnown RBP53.02■■■■■ 6.08
CAPN7-203ENST00000418994 DCAF1Q9Y4B6 1507 aa52.71■■■■■ 6.03
CAPN7-203ENST00000418994 UNC13AQ9UPW8 1703 aa52.29■■■■■ 5.96
CAPN7-203ENST00000418994 PABPN1Q86U42 306 aaKnown RBP eCLIP52.08■■■■■ 5.93
CAPN7-203ENST00000418994 BICRAQ9NZM4 1560 aa51.91■■■■■ 5.9
CAPN7-203ENST00000418994 SCRIBQ14160 1630 aa51.77■■■■■ 5.88
CAPN7-203ENST00000418994 DNAJC5BQ9UF47 199 aa51.73■■■■■ 5.87
CAPN7-203ENST00000418994 SHROOM4Q9ULL8 1493 aa51.37■■■■■ 5.81
CAPN7-203ENST00000418994 EIF4G1Q04637 1599 aaKnown RBP50.57■■■■■ 5.69
CAPN7-203ENST00000418994 CC2D2AQ9P2K1 1620 aa50.43■■■■■ 5.66
CAPN7-203ENST00000418994 CECR2Q9BXF3 1484 aa50.14■■■■■ 5.62
CAPN7-203ENST00000418994 SMARCA4P51532 1647 aa49.49■■■■■ 5.51
CAPN7-203ENST00000418994 BAZ1AQ9NRL2 1556 aaPredicted RBP49.41■■■■■ 5.5
CAPN7-203ENST00000418994 NCAPD3P42695 1498 aa49.3■■■■■ 5.48
CAPN7-203ENST00000418994 ATAD2BQ9ULI0 1458 aa49.29■■■■■ 5.48
CAPN7-203ENST00000418994 SMARCA2P51531 1590 aa49.22■■■■■ 5.47
CAPN7-203ENST00000418994 MROH2BQ7Z745 1585 aa49.1■■■■■ 5.45
CAPN7-203ENST00000418994 HMGXB3Q12766 1538 aa49.04■■■■■ 5.44
CAPN7-203ENST00000418994 PEG3Q9GZU2 1588 aa49.01■■■■■ 5.44
CAPN7-203ENST00000418994 BAZ1BQ9UIG0 1483 aaKnown RBP48.87■■■■■ 5.41
CAPN7-203ENST00000418994 WIZO95785 1651 aa48.55■■■■■ 5.36
CAPN7-203ENST00000418994 RSF1Q96T23 1441 aaPredicted RBP48.46■■■■■ 5.35
CAPN7-203ENST00000418994 NESP48681 1621 aa48.18■■■■■ 5.3
CAPN7-203ENST00000418994 ERCC6Q03468 1493 aa48.1■■■■■ 5.29
CAPN7-203ENST00000418994 TOP2AP11388 1531 aaKnown RBP48.03■■■■■ 5.28
CAPN7-203ENST00000418994 LAMC3Q9Y6N6 1575 aa48.03■■■■■ 5.28
CAPN7-203ENST00000418994 CADPSQ9ULU8 1353 aa47.86■■■■■ 5.25
CAPN7-203ENST00000418994 PDS5BQ9NTI5 1447 aa47.73■■■■■ 5.23
CAPN7-203ENST00000418994 CUX2O14529 1486 aa47.67■■■■■ 5.22
CAPN7-203ENST00000418994 KIF21AQ7Z4S6 1674 aa47.58■■■■■ 5.21
CAPN7-203ENST00000418994 CFTRP13569 1480 aa47.52■■■■■ 5.2
CAPN7-203ENST00000418994 THOC2Q8NI27 1593 aaKnown RBP47.5■■■■■ 5.19
CAPN7-203ENST00000418994 CCDC88BA6NC98 1476 aa47.47■■■■■ 5.19
CAPN7-203ENST00000418994 FANCD2Q9BXW9 1451 aa47.31■■■■■ 5.16
CAPN7-203ENST00000418994 CEP164Q9UPV0 1460 aa47.27■■■■■ 5.16
CAPN7-203ENST00000418994 MRC2Q9UBG0 1479 aa47.26■■■■■ 5.16
CAPN7-203ENST00000418994 DNAJC5Q9H3Z4 198 aa47.24■■■■■ 5.15
CAPN7-203ENST00000418994 PRDM2Q13029 1718 aa47.11■■■■■ 5.13
CAPN7-203ENST00000418994 WDR62O43379 1518 aa47.1■■■■■ 5.13
CAPN7-203ENST00000418994 SUPT5HO00267 1087 aaKnown RBP47.06■■■■■ 5.12
CAPN7-203ENST00000418994 URB2Q14146 1524 aaKnown RBP46.84■■■■■ 5.09
CAPN7-203ENST00000418994 TOPBP1Q92547 1522 aa46.52■■■■■ 5.04
CAPN7-203ENST00000418994 ABCC8Q09428 1581 aa46.51■■■■■ 5.04
CAPN7-203ENST00000418994 DNMBPQ6XZF7 1577 aa46.44■■■■■ 5.03
CAPN7-203ENST00000418994 IFT140Q96RY7 1462 aa46.3■■■■■ 5
CAPN7-203ENST00000418994 POLA1P09884 1462 aaPredicted RBP46.11■■■■■ 4.97
CAPN7-203ENST00000418994 ZNF608Q9ULD9 1512 aaPredicted RBP46.09■■■■■ 4.97
CAPN7-203ENST00000418994 CUX1P39880 1505 aa46.08■■■■■ 4.97
CAPN7-203ENST00000418994 TARBP1Q13395 1621 aaKnown RBP46.02■■■■■ 4.96
CAPN7-203ENST00000418994 FGD5Q6ZNL6 1462 aa45.97■■■■■ 4.95
CAPN7-203ENST00000418994 SOGA1O94964 1423 aa45.93■■■■■ 4.94
CAPN7-203ENST00000418994 RAD54L2Q9Y4B4 1467 aa45.91■■■■■ 4.94
CAPN7-203ENST00000418994 EIF4G3O43432 1585 aaKnown RBP45.89■■■■■ 4.94
CAPN7-203ENST00000418994 AQRO60306 1485 aaKnown RBP eCLIP45.8■■■■■ 4.92
CAPN7-203ENST00000418994 WRNQ14191 1432 aaPredicted RBP eCLIP45.7■■■■■ 4.91
CAPN7-203ENST00000418994 TDRD9Q8NDG6 1382 aaKnown RBP45.69■■■■■ 4.9
CAPN7-203ENST00000418994 OSCARQ8IYS5 282 aa45.66■■■■■ 4.9
CAPN7-203ENST00000418994 WDR97A6NE52 1622 aa45.66■■■■■ 4.9
CAPN7-203ENST00000418994 TOP2BQ02880 1626 aa45.61■■■■■ 4.89
CAPN7-203ENST00000418994 BIVM-ERCC5R4GMW8 1640 aa45.6■■■■■ 4.89
CAPN7-203ENST00000418994 SYNJ1O43426 1573 aa45.58■■■■■ 4.89
CAPN7-203ENST00000418994 ABCA10Q8WWZ4 1543 aa45.52■■■■■ 4.88
CAPN7-203ENST00000418994 GRIN2BQ13224 1484 aa45.42■■■■■ 4.86
CAPN7-203ENST00000418994 GAPVD1Q14C86 1478 aa45.39■■■■■ 4.86
CAPN7-203ENST00000418994 SNAPC4Q5SXM2 1469 aa45.39■■■■■ 4.86
CAPN7-203ENST00000418994 CHD1O14646 1710 aa45.35■■■■■ 4.85
CAPN7-203ENST00000418994 ABCA5Q8WWZ7 1642 aa45.34■■■■■ 4.85
CAPN7-203ENST00000418994 MAGI1Q96QZ7 1491 aaPredicted RBP45.33■■■■■ 4.85
CAPN7-203ENST00000418994 FBLN2P98095 1184 aa45.32■■■■■ 4.85
CAPN7-203ENST00000418994 TRIM41Q8WV44 630 aa45.29■■■■■ 4.84
CAPN7-203ENST00000418994 PBRM1Q86U86 1689 aa45.28■■■■■ 4.84
CAPN7-203ENST00000418994 CHMP7Q8WUX9 453 aaPredicted RBP45.16■■■■■ 4.82
CAPN7-203ENST00000418994 SYNJ2O15056 1496 aa45.15■■■■■ 4.82
CAPN7-203ENST00000418994 ERICH3Q5RHP9 1530 aa44.96■■■■■ 4.79
CAPN7-203ENST00000418994 ADAMTS12P58397 1594 aa44.94■■■■■ 4.78
CAPN7-203ENST00000418994 RIMBP3CA6NJZ7 1639 aa44.93■■■■■ 4.78
CAPN7-203ENST00000418994 RIMBP3BA6NNM3 1639 aa44.93■■■■■ 4.78
CAPN7-203ENST00000418994 RIMBP3Q9UFD9 1639 aa44.93■■■■■ 4.78
CAPN7-203ENST00000418994 ARHGEF11O15085 1522 aa44.91■■■■■ 4.78
CAPN7-203ENST00000418994 CLASP1Q7Z460 1538 aa44.88■■■■■ 4.78
CAPN7-203ENST00000418994 FHAD1B1AJZ9 1412 aa44.86■■■■■ 4.77
CAPN7-203ENST00000418994 GRIN2AQ12879 1464 aa44.83■■■■■ 4.77
CAPN7-203ENST00000418994 KIF27Q86VH2 1401 aa44.78■■■■■ 4.76
CAPN7-203ENST00000418994 NUP160Q12769 1436 aa44.65■■■■■ 4.74
CAPN7-203ENST00000418994 IGF1RP08069 1367 aa44.62■■■■■ 4.73
CAPN7-203ENST00000418994 CEP170Q5SW79 1584 aa44.6■■■■■ 4.73
CAPN7-203ENST00000418994 ARAP1Q96P48 1450 aa44.53■■■■■ 4.72
CAPN7-203ENST00000418994 CYB5RLQ6IPT4 315 aa44.51■■■■■ 4.72
CAPN7-203ENST00000418994 CUL7Q14999 1698 aa44.5■■■■■ 4.71
CAPN7-203ENST00000418994 CARMIL1Q5VZK9 1371 aa44.35■■■■■ 4.69
CAPN7-203ENST00000418994 SHROOM2Q13796 1616 aa44.32■■■■■ 4.68
CAPN7-203ENST00000418994 RUSC2Q8N2Y8 1516 aa44.27■■■■■ 4.68
CAPN7-203ENST00000418994 ERCC6L2Q5T890 1561 aa44.23■■■■■ 4.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms