RNA–Protein interactions for RNA: ENST00000418797.5

ATP1A1-204, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 3

Gene ATP1A1, Length 654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-204ENST00000418797 NISCHQ9Y2I1 1504 aa50.01■■■■■ 5.6
ATP1A1-204ENST00000418797 CCDC180Q9P1Z9 1646 aa44.83■■■■■ 4.77
ATP1A1-204ENST00000418797 ABCC9O60706 1549 aa44.78■■■■■ 4.76
ATP1A1-204ENST00000418797 RB1CC1Q8TDY2 1594 aa42.63■■■■■ 4.41
ATP1A1-204ENST00000418797 NACADO15069 1562 aa42.37■■■■■ 4.37
ATP1A1-204ENST00000418797 DCAF8L2P0C7V8 631 aa42.12■■■■■ 4.33
ATP1A1-204ENST00000418797 DNAJC5BQ9UF47 199 aa42.08■■■■■ 4.33
ATP1A1-204ENST00000418797 MYO15BQ96JP2 1530 aa41.84■■■■■ 4.29
ATP1A1-204ENST00000418797 UNC13AQ9UPW8 1703 aa41.75■■■■■ 4.27
ATP1A1-204ENST00000418797 PABPN1Q86U42 306 aaKnown RBP eCLIP41.72■■■■■ 4.27
ATP1A1-204ENST00000418797 BICRAQ9NZM4 1560 aa41.48■■■■■ 4.23
ATP1A1-204ENST00000418797 ZCCHC6Q5VYS8 1495 aaKnown RBP41.45■■■■■ 4.23
ATP1A1-204ENST00000418797 DCAF1Q9Y4B6 1507 aa41.32■■■■■ 4.2
ATP1A1-204ENST00000418797 SHROOM4Q9ULL8 1493 aa40.83■■■■■ 4.13
ATP1A1-204ENST00000418797 SCRIBQ14160 1630 aa40.83■■■■■ 4.13
ATP1A1-204ENST00000418797 CC2D2AQ9P2K1 1620 aa40.48■■■■■ 4.07
ATP1A1-204ENST00000418797 EIF4G1Q04637 1599 aaKnown RBP40.4■■■■■ 4.06
ATP1A1-204ENST00000418797 CECR2Q9BXF3 1484 aa40.32■■■■■ 4.05
ATP1A1-204ENST00000418797 NCAPD3P42695 1498 aa39.16■■■■□ 3.86
ATP1A1-204ENST00000418797 ATAD2BQ9ULI0 1458 aa39.04■■■■□ 3.84
ATP1A1-204ENST00000418797 SMARCA4P51532 1647 aa38.99■■■■□ 3.83
ATP1A1-204ENST00000418797 SMARCA2P51531 1590 aa38.88■■■■□ 3.81
ATP1A1-204ENST00000418797 HMGXB3Q12766 1538 aa38.84■■■■□ 3.81
ATP1A1-204ENST00000418797 BAZ1AQ9NRL2 1556 aaPredicted RBP38.78■■■■□ 3.8
ATP1A1-204ENST00000418797 PEG3Q9GZU2 1588 aa38.64■■■■□ 3.78
ATP1A1-204ENST00000418797 ERCC6Q03468 1493 aa38.6■■■■□ 3.77
ATP1A1-204ENST00000418797 BAZ1BQ9UIG0 1483 aaKnown RBP38.6■■■■□ 3.77
ATP1A1-204ENST00000418797 CUX2O14529 1486 aa38.57■■■■□ 3.76
ATP1A1-204ENST00000418797 DNAJC5Q9H3Z4 198 aa38.55■■■■□ 3.76
ATP1A1-204ENST00000418797 MROH2BQ7Z745 1585 aa38.55■■■■□ 3.76
ATP1A1-204ENST00000418797 NESP48681 1621 aa38.52■■■■□ 3.76
ATP1A1-204ENST00000418797 LAMC3Q9Y6N6 1575 aa38.23■■■■□ 3.71
ATP1A1-204ENST00000418797 THOC2Q8NI27 1593 aaKnown RBP38.1■■■■□ 3.69
ATP1A1-204ENST00000418797 WIZO95785 1651 aa38.07■■■■□ 3.69
ATP1A1-204ENST00000418797 KIF21AQ7Z4S6 1674 aa38.01■■■■□ 3.67
ATP1A1-204ENST00000418797 PDS5BQ9NTI5 1447 aa37.98■■■■□ 3.67
ATP1A1-204ENST00000418797 CADPSQ9ULU8 1353 aa37.94■■■■□ 3.66
ATP1A1-204ENST00000418797 RSF1Q96T23 1441 aaPredicted RBP37.77■■■■□ 3.64
ATP1A1-204ENST00000418797 MRC2Q9UBG0 1479 aa37.65■■■■□ 3.62
ATP1A1-204ENST00000418797 WDR62O43379 1518 aa37.59■■■■□ 3.61
ATP1A1-204ENST00000418797 TOP2AP11388 1531 aaKnown RBP37.57■■■■□ 3.61
ATP1A1-204ENST00000418797 CFTRP13569 1480 aa37.53■■■■□ 3.6
ATP1A1-204ENST00000418797 CEP164Q9UPV0 1460 aa37.52■■■■□ 3.6
ATP1A1-204ENST00000418797 FANCD2Q9BXW9 1451 aa37.5■■■■□ 3.59
ATP1A1-204ENST00000418797 URB2Q14146 1524 aaKnown RBP37.22■■■■□ 3.55
ATP1A1-204ENST00000418797 CCDC88BA6NC98 1476 aa37.18■■■■□ 3.54
ATP1A1-204ENST00000418797 PRDM2Q13029 1718 aa37.13■■■■□ 3.54
ATP1A1-204ENST00000418797 OSCARQ8IYS5 282 aa36.82■■■■□ 3.48
ATP1A1-204ENST00000418797 TOPBP1Q92547 1522 aa36.81■■■■□ 3.48
ATP1A1-204ENST00000418797 TRIM41Q8WV44 630 aa36.8■■■■□ 3.48
ATP1A1-204ENST00000418797 IFT140Q96RY7 1462 aa36.76■■■■□ 3.48
ATP1A1-204ENST00000418797 ZNF608Q9ULD9 1512 aaPredicted RBP36.75■■■■□ 3.47
ATP1A1-204ENST00000418797 ABCC8Q09428 1581 aa36.7■■■■□ 3.46
ATP1A1-204ENST00000418797 DNMBPQ6XZF7 1577 aa36.66■■■■□ 3.46
ATP1A1-204ENST00000418797 EIF4G3O43432 1585 aaKnown RBP36.51■■■■□ 3.44
ATP1A1-204ENST00000418797 TARBP1Q13395 1621 aaKnown RBP36.51■■■■□ 3.43
ATP1A1-204ENST00000418797 POLA1P09884 1462 aaPredicted RBP36.43■■■■□ 3.42
ATP1A1-204ENST00000418797 AQRO60306 1485 aaKnown RBP eCLIP36.42■■■■□ 3.421e-11■■■■□ 24.7
ATP1A1-204ENST00000418797 RIMBP3CA6NJZ7 1639 aa36.35■■■■□ 3.41
ATP1A1-204ENST00000418797 RIMBP3BA6NNM3 1639 aa36.35■■■■□ 3.41
ATP1A1-204ENST00000418797 RIMBP3Q9UFD9 1639 aa36.35■■■■□ 3.41
ATP1A1-204ENST00000418797 RAD54L2Q9Y4B4 1467 aa36.31■■■■□ 3.4
ATP1A1-204ENST00000418797 SOGA1O94964 1423 aa36.26■■■■□ 3.4
ATP1A1-204ENST00000418797 CHD1O14646 1710 aa36.25■■■■□ 3.39
ATP1A1-204ENST00000418797 ARHGEF11O15085 1522 aa36.24■■■■□ 3.39
ATP1A1-204ENST00000418797 CUX1P39880 1505 aa36.21■■■■□ 3.39
ATP1A1-204ENST00000418797 FGD5Q6ZNL6 1462 aa36.2■■■■□ 3.39
ATP1A1-204ENST00000418797 TDRD9Q8NDG6 1382 aaKnown RBP36.19■■■■□ 3.38
ATP1A1-204ENST00000418797 FBLN2P98095 1184 aa36.1■■■■□ 3.37
ATP1A1-204ENST00000418797 WDR97A6NE52 1622 aa36.08■■■■□ 3.37
ATP1A1-204ENST00000418797 SUPT5HO00267 1087 aaKnown RBP36.07■■■■□ 3.36
ATP1A1-204ENST00000418797 SNAPC4Q5SXM2 1469 aa36.01■■■■□ 3.36
ATP1A1-204ENST00000418797 CYB5RLQ6IPT4 315 aa35.97■■■■□ 3.35
ATP1A1-204ENST00000418797 GRIN2BQ13224 1484 aa35.92■■■■□ 3.34
ATP1A1-204ENST00000418797 MAGI1Q96QZ7 1491 aaPredicted RBP35.92■■■■□ 3.34
ATP1A1-204ENST00000418797 ARAP1Q96P48 1450 aa35.9■■■■□ 3.34
ATP1A1-204ENST00000418797 CHMP7Q8WUX9 453 aaPredicted RBP35.86■■■■□ 3.33
ATP1A1-204ENST00000418797 CLASP1Q7Z460 1538 aa35.85■■■■□ 3.33
ATP1A1-204ENST00000418797 GAPVD1Q14C86 1478 aa35.82■■■■□ 3.32
ATP1A1-204ENST00000418797 ABCA10Q8WWZ4 1543 aa35.81■■■■□ 3.32
ATP1A1-204ENST00000418797 SYNJ2O15056 1496 aa35.8■■■■□ 3.32
ATP1A1-204ENST00000418797 PBRM1Q86U86 1689 aa35.79■■■■□ 3.32
ATP1A1-204ENST00000418797 SYNJ1O43426 1573 aa35.77■■■■□ 3.32
ATP1A1-204ENST00000418797 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
ATP1A1-204ENST00000418797 WRNQ14191 1432 aaPredicted RBP eCLIP35.65■■■■□ 3.3
ATP1A1-204ENST00000418797 TOP2BQ02880 1626 aa35.62■■■■□ 3.29
ATP1A1-204ENST00000418797 BIVM-ERCC5R4GMW8 1640 aa35.62■■■■□ 3.29
ATP1A1-204ENST00000418797 TRHP20396 242 aaPredicted RBP35.49■■■■□ 3.27
ATP1A1-204ENST00000418797 GRIN2AQ12879 1464 aa35.48■■■■□ 3.27
ATP1A1-204ENST00000418797 ADAMTS12P58397 1594 aa35.46■■■■□ 3.27
ATP1A1-204ENST00000418797 NUP160Q12769 1436 aa35.39■■■■□ 3.26
ATP1A1-204ENST00000418797 CEP170Q5SW79 1584 aa35.37■■■■□ 3.25
ATP1A1-204ENST00000418797 FHAD1B1AJZ9 1412 aa35.36■■■■□ 3.25
ATP1A1-204ENST00000418797 ERICH3Q5RHP9 1530 aa35.35■■■■□ 3.25
ATP1A1-204ENST00000418797 ERCC6L2Q5T890 1561 aa35.32■■■■□ 3.24
ATP1A1-204ENST00000418797 SHROOM2Q13796 1616 aa35.22■■■■□ 3.23
ATP1A1-204ENST00000418797 JPH4Q96JJ6 628 aa35.02■■■■□ 3.2
ATP1A1-204ENST00000418797 PRG4Q92954 1404 aaPredicted RBP35■■■■□ 3.19
ATP1A1-204ENST00000418797 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
ATP1A1-204ENST00000418797 IGF1RP08069 1367 aa34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms