RNA–Protein interactions for RNA: ENST00000418790.5

TRAK1-204, Transcript of trafficking kinesin protein 1, humanhuman

TSL 4

Gene TRAK1, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-204ENST00000418790 NISCHQ9Y2I1 1504 aa23.47■■□□□ 1.35
TRAK1-204ENST00000418790 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.87
TRAK1-204ENST00000418790 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
TRAK1-204ENST00000418790 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
TRAK1-204ENST00000418790 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
TRAK1-204ENST00000418790 ABCC9O60706 1549 aa19.18■□□□□ 0.66
TRAK1-204ENST00000418790 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
TRAK1-204ENST00000418790 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
TRAK1-204ENST00000418790 NACADO15069 1562 aa19.01■□□□□ 0.63
TRAK1-204ENST00000418790 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
TRAK1-204ENST00000418790 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
TRAK1-204ENST00000418790 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
TRAK1-204ENST00000418790 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
TRAK1-204ENST00000418790 BICRAQ9NZM4 1560 aa18.25■□□□□ 0.51
TRAK1-204ENST00000418790 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
TRAK1-204ENST00000418790 CECR2Q9BXF3 1484 aa18.21■□□□□ 0.51
TRAK1-204ENST00000418790 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
TRAK1-204ENST00000418790 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
TRAK1-204ENST00000418790 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
TRAK1-204ENST00000418790 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
TRAK1-204ENST00000418790 WIZO95785 1651 aa17.99■□□□□ 0.47
TRAK1-204ENST00000418790 TOP2AP11388 1531 aaKnown RBP17.83■□□□□ 0.45
TRAK1-204ENST00000418790 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.44
TRAK1-204ENST00000418790 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
TRAK1-204ENST00000418790 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
TRAK1-204ENST00000418790 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
TRAK1-204ENST00000418790 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
TRAK1-204ENST00000418790 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
TRAK1-204ENST00000418790 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
TRAK1-204ENST00000418790 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
TRAK1-204ENST00000418790 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
TRAK1-204ENST00000418790 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
TRAK1-204ENST00000418790 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
TRAK1-204ENST00000418790 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
TRAK1-204ENST00000418790 CFTRP13569 1480 aa17.17■□□□□ 0.34
TRAK1-204ENST00000418790 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
TRAK1-204ENST00000418790 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
TRAK1-204ENST00000418790 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
TRAK1-204ENST00000418790 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
TRAK1-204ENST00000418790 LOC105371045A0A1W2PR82 267 aa17.05■□□□□ 0.32
TRAK1-204ENST00000418790 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
TRAK1-204ENST00000418790 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
TRAK1-204ENST00000418790 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
TRAK1-204ENST00000418790 EEA1Q15075 1411 aa16.99■□□□□ 0.31
TRAK1-204ENST00000418790 SOGA1O94964 1423 aa16.96■□□□□ 0.31
TRAK1-204ENST00000418790 CUX1P39880 1505 aa16.96■□□□□ 0.3
TRAK1-204ENST00000418790 LAMC3Q9Y6N6 1575 aa16.93■□□□□ 0.3
TRAK1-204ENST00000418790 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
TRAK1-204ENST00000418790 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
TRAK1-204ENST00000418790 NESP48681 1621 aa16.88■□□□□ 0.29
TRAK1-204ENST00000418790 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
TRAK1-204ENST00000418790 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
TRAK1-204ENST00000418790 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
TRAK1-204ENST00000418790 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
TRAK1-204ENST00000418790 KIF21BO75037 1637 aa16.78■□□□□ 0.28
TRAK1-204ENST00000418790 PDS5BQ9NTI5 1447 aa16.77■□□□□ 0.27
TRAK1-204ENST00000418790 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
TRAK1-204ENST00000418790 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
TRAK1-204ENST00000418790 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
TRAK1-204ENST00000418790 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
TRAK1-204ENST00000418790 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
TRAK1-204ENST00000418790 TNIKQ9UKE5 1360 aa16.71■□□□□ 0.27
TRAK1-204ENST00000418790 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
TRAK1-204ENST00000418790 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
TRAK1-204ENST00000418790 CUX2O14529 1486 aa16.65■□□□□ 0.26
TRAK1-204ENST00000418790 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
TRAK1-204ENST00000418790 PRXQ9BXM0 1461 aa16.65■□□□□ 0.26
TRAK1-204ENST00000418790 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
TRAK1-204ENST00000418790 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
TRAK1-204ENST00000418790 RAPGEF2Q9Y4G8 1499 aa16.62■□□□□ 0.25
TRAK1-204ENST00000418790 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
TRAK1-204ENST00000418790 UBTFP17480 764 aaKnown RBP16.6■□□□□ 0.25
TRAK1-204ENST00000418790 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
TRAK1-204ENST00000418790 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
TRAK1-204ENST00000418790 MRC2Q9UBG0 1479 aa16.57■□□□□ 0.24
TRAK1-204ENST00000418790 IGF1RP08069 1367 aa16.54■□□□□ 0.24
TRAK1-204ENST00000418790 WDR62O43379 1518 aa16.5■□□□□ 0.23
TRAK1-204ENST00000418790 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
TRAK1-204ENST00000418790 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
TRAK1-204ENST00000418790 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
TRAK1-204ENST00000418790 CLIP1P30622 1438 aa16.46■□□□□ 0.23
TRAK1-204ENST00000418790 CUL7Q14999 1698 aa16.45■□□□□ 0.22
TRAK1-204ENST00000418790 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
TRAK1-204ENST00000418790 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
TRAK1-204ENST00000418790 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
TRAK1-204ENST00000418790 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
TRAK1-204ENST00000418790 IFT140Q96RY7 1462 aa16.38■□□□□ 0.21
TRAK1-204ENST00000418790 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
TRAK1-204ENST00000418790 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
TRAK1-204ENST00000418790 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
TRAK1-204ENST00000418790 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
TRAK1-204ENST00000418790 ARAP1Q96P48 1450 aa16.33■□□□□ 0.2
TRAK1-204ENST00000418790 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
TRAK1-204ENST00000418790 CTTNBP2Q8WZ74 1663 aa16.28■□□□□ 0.2
TRAK1-204ENST00000418790 AQRO60306 1485 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRAK1-204ENST00000418790 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
TRAK1-204ENST00000418790 ADAMTS12P58397 1594 aa16.27■□□□□ 0.2
TRAK1-204ENST00000418790 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
TRAK1-204ENST00000418790 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
TRAK1-204ENST00000418790 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms