RNA–Protein interactions for RNA: ENST00000417903.5

NDUFA3-205, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-205ENST00000417903 NISCHQ9Y2I1 1504 aa36.76■■■■□ 3.48
NDUFA3-205ENST00000417903 CCDC180Q9P1Z9 1646 aa32.62■■■□□ 2.81
NDUFA3-205ENST00000417903 ABCC9O60706 1549 aa32.1■■■□□ 2.73
NDUFA3-205ENST00000417903 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
NDUFA3-205ENST00000417903 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
NDUFA3-205ENST00000417903 NACADO15069 1562 aa30.79■■■□□ 2.52
NDUFA3-205ENST00000417903 MYO15BQ96JP2 1530 aa30.59■■■□□ 2.49
NDUFA3-205ENST00000417903 ZCCHC6Q5VYS8 1495 aaKnown RBP30.57■■■□□ 2.48
NDUFA3-205ENST00000417903 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
NDUFA3-205ENST00000417903 PABPN1Q86U42 306 aaKnown RBP eCLIP30.06■■■□□ 2.4
NDUFA3-205ENST00000417903 UNC13AQ9UPW8 1703 aa29.94■■■□□ 2.38
NDUFA3-205ENST00000417903 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
NDUFA3-205ENST00000417903 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
NDUFA3-205ENST00000417903 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
NDUFA3-205ENST00000417903 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
NDUFA3-205ENST00000417903 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
NDUFA3-205ENST00000417903 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
NDUFA3-205ENST00000417903 CECR2Q9BXF3 1484 aa28.87■■■□□ 2.21
NDUFA3-205ENST00000417903 BAZ1AQ9NRL2 1556 aaPredicted RBP28.49■■■□□ 2.15
NDUFA3-205ENST00000417903 SMARCA4P51532 1647 aa28.47■■■□□ 2.15
NDUFA3-205ENST00000417903 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
NDUFA3-205ENST00000417903 ATAD2BQ9ULI0 1458 aa28.43■■■□□ 2.14
NDUFA3-205ENST00000417903 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
NDUFA3-205ENST00000417903 MROH2BQ7Z745 1585 aa28.31■■■□□ 2.12
NDUFA3-205ENST00000417903 PEG3Q9GZU2 1588 aa28.23■■■□□ 2.11
NDUFA3-205ENST00000417903 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
NDUFA3-205ENST00000417903 BAZ1BQ9UIG0 1483 aaKnown RBP28.18■■■□□ 2.1
NDUFA3-205ENST00000417903 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.08
NDUFA3-205ENST00000417903 WIZO95785 1651 aa27.94■■■□□ 2.06
NDUFA3-205ENST00000417903 NESP48681 1621 aa27.73■■■□□ 2.03
NDUFA3-205ENST00000417903 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
NDUFA3-205ENST00000417903 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
NDUFA3-205ENST00000417903 CADPSQ9ULU8 1353 aa27.65■■■□□ 2.02
NDUFA3-205ENST00000417903 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
NDUFA3-205ENST00000417903 PDS5BQ9NTI5 1447 aa27.57■■■□□ 2
NDUFA3-205ENST00000417903 CUX2O14529 1486 aa27.43■■□□□ 1.98
NDUFA3-205ENST00000417903 CFTRP13569 1480 aa27.43■■□□□ 1.98
NDUFA3-205ENST00000417903 CCDC88BA6NC98 1476 aa27.42■■□□□ 1.98
NDUFA3-205ENST00000417903 SUPT5HO00267 1087 aaKnown RBP27.31■■□□□ 1.96
NDUFA3-205ENST00000417903 KIF21AQ7Z4S6 1674 aa27.28■■□□□ 1.96
NDUFA3-205ENST00000417903 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
NDUFA3-205ENST00000417903 THOC2Q8NI27 1593 aaKnown RBP27.24■■□□□ 1.95
NDUFA3-205ENST00000417903 CEP164Q9UPV0 1460 aa27.24■■□□□ 1.95
NDUFA3-205ENST00000417903 MRC2Q9UBG0 1479 aa27.22■■□□□ 1.95
NDUFA3-205ENST00000417903 WDR62O43379 1518 aa27.09■■□□□ 1.93
NDUFA3-205ENST00000417903 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
NDUFA3-205ENST00000417903 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
NDUFA3-205ENST00000417903 ABCC8Q09428 1581 aa26.87■■□□□ 1.89
NDUFA3-205ENST00000417903 TOPBP1Q92547 1522 aa26.81■■□□□ 1.88
NDUFA3-205ENST00000417903 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
NDUFA3-205ENST00000417903 DNMBPQ6XZF7 1577 aa26.74■■□□□ 1.87
NDUFA3-205ENST00000417903 IFT140Q96RY7 1462 aa26.7■■□□□ 1.87
NDUFA3-205ENST00000417903 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
NDUFA3-205ENST00000417903 CUX1P39880 1505 aa26.55■■□□□ 1.84
NDUFA3-205ENST00000417903 SOGA1O94964 1423 aa26.55■■□□□ 1.84
NDUFA3-205ENST00000417903 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
NDUFA3-205ENST00000417903 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
NDUFA3-205ENST00000417903 RAD54L2Q9Y4B4 1467 aa26.48■■□□□ 1.83
NDUFA3-205ENST00000417903 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
NDUFA3-205ENST00000417903 AQRO60306 1485 aaKnown RBP eCLIP26.43■■□□□ 1.82
NDUFA3-205ENST00000417903 WRNQ14191 1432 aaPredicted RBP eCLIP26.41■■□□□ 1.82
NDUFA3-205ENST00000417903 OSCARQ8IYS5 282 aa26.41■■□□□ 1.82
NDUFA3-205ENST00000417903 TDRD9Q8NDG6 1382 aaKnown RBP26.4■■□□□ 1.82
NDUFA3-205ENST00000417903 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
NDUFA3-205ENST00000417903 TOP2BQ02880 1626 aa26.29■■□□□ 1.8
NDUFA3-205ENST00000417903 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
NDUFA3-205ENST00000417903 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
NDUFA3-205ENST00000417903 ABCA10Q8WWZ4 1543 aa26.25■■□□□ 1.79
NDUFA3-205ENST00000417903 BIVM-ERCC5R4GMW8 1640 aa26.25■■□□□ 1.79
NDUFA3-205ENST00000417903 FBLN2P98095 1184 aa26.21■■□□□ 1.79
NDUFA3-205ENST00000417903 GRIN2BQ13224 1484 aa26.21■■□□□ 1.79
NDUFA3-205ENST00000417903 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
NDUFA3-205ENST00000417903 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
NDUFA3-205ENST00000417903 SNAPC4Q5SXM2 1469 aa26.14■■□□□ 1.78
NDUFA3-205ENST00000417903 MAGI1Q96QZ7 1491 aaPredicted RBP26.13■■□□□ 1.77
NDUFA3-205ENST00000417903 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
NDUFA3-205ENST00000417903 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
NDUFA3-205ENST00000417903 CHD1O14646 1710 aa26■■□□□ 1.75
NDUFA3-205ENST00000417903 PBRM1Q86U86 1689 aa25.98■■□□□ 1.75
NDUFA3-205ENST00000417903 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
NDUFA3-205ENST00000417903 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
NDUFA3-205ENST00000417903 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
NDUFA3-205ENST00000417903 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
NDUFA3-205ENST00000417903 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
NDUFA3-205ENST00000417903 IGF1RP08069 1367 aa25.83■■□□□ 1.73
NDUFA3-205ENST00000417903 ADAMTS12P58397 1594 aa25.83■■□□□ 1.73
NDUFA3-205ENST00000417903 ARHGEF11O15085 1522 aa25.82■■□□□ 1.72
NDUFA3-205ENST00000417903 CLASP1Q7Z460 1538 aa25.8■■□□□ 1.72
NDUFA3-205ENST00000417903 RIMBP3CA6NJZ7 1639 aa25.78■■□□□ 1.72
NDUFA3-205ENST00000417903 RIMBP3BA6NNM3 1639 aa25.78■■□□□ 1.72
NDUFA3-205ENST00000417903 RIMBP3Q9UFD9 1639 aa25.78■■□□□ 1.72
NDUFA3-205ENST00000417903 NUP160Q12769 1436 aa25.74■■□□□ 1.71
NDUFA3-205ENST00000417903 CYB5RLQ6IPT4 315 aa25.72■■□□□ 1.71
NDUFA3-205ENST00000417903 CARMIL1Q5VZK9 1371 aa25.67■■□□□ 1.7
NDUFA3-205ENST00000417903 CEP170Q5SW79 1584 aa25.65■■□□□ 1.7
NDUFA3-205ENST00000417903 CUL7Q14999 1698 aa25.61■■□□□ 1.69
NDUFA3-205ENST00000417903 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
NDUFA3-205ENST00000417903 JPH4Q96JJ6 628 aa25.59■■□□□ 1.69
NDUFA3-205ENST00000417903 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.68
NDUFA3-205ENST00000417903 KIAA0586Q9BVV6 1533 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms