RNA–Protein interactions for RNA: ENST00000417539.1

AC078883.3-202, humanhuman

TSL 3 BASIC

Gene AC078883.3, Length 754 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078883.3-202ENST00000417539 AEBP2Q6ZN18 517 aaPredicted RBP24.9■■□□□ 1.58
AC078883.3-202ENST00000417539 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
AC078883.3-202ENST00000417539 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
AC078883.3-202ENST00000417539 SENP3Q9H4L4 574 aaPredicted RBP21.29■■□□□ 1
AC078883.3-202ENST00000417539 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
AC078883.3-202ENST00000417539 CCDC180Q9P1Z9 1646 aa20.21■□□□□ 0.83
AC078883.3-202ENST00000417539 FOXD1Q16676 465 aa19.9■□□□□ 0.78
AC078883.3-202ENST00000417539 ABCC9O60706 1549 aa19.7■□□□□ 0.74
AC078883.3-202ENST00000417539 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
AC078883.3-202ENST00000417539 NACADO15069 1562 aa18.96■□□□□ 0.63
AC078883.3-202ENST00000417539 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
AC078883.3-202ENST00000417539 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
AC078883.3-202ENST00000417539 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
AC078883.3-202ENST00000417539 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
AC078883.3-202ENST00000417539 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
AC078883.3-202ENST00000417539 MSH5O43196 834 aa18.74■□□□□ 0.59
AC078883.3-202ENST00000417539 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
AC078883.3-202ENST00000417539 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
AC078883.3-202ENST00000417539 PIAS4Q8N2W9 510 aaPredicted RBP18.49■□□□□ 0.55
AC078883.3-202ENST00000417539 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
AC078883.3-202ENST00000417539 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
AC078883.3-202ENST00000417539 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
AC078883.3-202ENST00000417539 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
AC078883.3-202ENST00000417539 ADRA2BP18089 450 aa18.27■□□□□ 0.52
AC078883.3-202ENST00000417539 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
AC078883.3-202ENST00000417539 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
AC078883.3-202ENST00000417539 EIF4G1Q04637 1599 aaKnown RBP17.94■□□□□ 0.46
AC078883.3-202ENST00000417539 CC2D2AQ9P2K1 1620 aa17.89■□□□□ 0.45
AC078883.3-202ENST00000417539 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
AC078883.3-202ENST00000417539 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
AC078883.3-202ENST00000417539 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
AC078883.3-202ENST00000417539 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
AC078883.3-202ENST00000417539 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
AC078883.3-202ENST00000417539 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
AC078883.3-202ENST00000417539 MROH2BQ7Z745 1585 aa17.49■□□□□ 0.39
AC078883.3-202ENST00000417539 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
AC078883.3-202ENST00000417539 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
AC078883.3-202ENST00000417539 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
AC078883.3-202ENST00000417539 WIZO95785 1651 aa17.33■□□□□ 0.37
AC078883.3-202ENST00000417539 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
AC078883.3-202ENST00000417539 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
AC078883.3-202ENST00000417539 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
AC078883.3-202ENST00000417539 NESP48681 1621 aa17.09■□□□□ 0.33
AC078883.3-202ENST00000417539 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
AC078883.3-202ENST00000417539 KIF21AQ7Z4S6 1674 aa16.95■□□□□ 0.3
AC078883.3-202ENST00000417539 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
AC078883.3-202ENST00000417539 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
AC078883.3-202ENST00000417539 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
AC078883.3-202ENST00000417539 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.29
AC078883.3-202ENST00000417539 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.29
AC078883.3-202ENST00000417539 CFTRP13569 1480 aa16.88■□□□□ 0.29
AC078883.3-202ENST00000417539 PRDM2Q13029 1718 aa16.86■□□□□ 0.29
AC078883.3-202ENST00000417539 PDS5BQ9NTI5 1447 aa16.85■□□□□ 0.29
AC078883.3-202ENST00000417539 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
AC078883.3-202ENST00000417539 CUX2O14529 1486 aa16.81■□□□□ 0.28
AC078883.3-202ENST00000417539 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
AC078883.3-202ENST00000417539 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
AC078883.3-202ENST00000417539 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
AC078883.3-202ENST00000417539 WDR62O43379 1518 aa16.71■□□□□ 0.27
AC078883.3-202ENST00000417539 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
AC078883.3-202ENST00000417539 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
AC078883.3-202ENST00000417539 TOPBP1Q92547 1522 aa16.52■□□□□ 0.24
AC078883.3-202ENST00000417539 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
AC078883.3-202ENST00000417539 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
AC078883.3-202ENST00000417539 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
AC078883.3-202ENST00000417539 CUX1P39880 1505 aa16.41■□□□□ 0.22
AC078883.3-202ENST00000417539 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
AC078883.3-202ENST00000417539 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
AC078883.3-202ENST00000417539 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
AC078883.3-202ENST00000417539 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
AC078883.3-202ENST00000417539 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
AC078883.3-202ENST00000417539 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
AC078883.3-202ENST00000417539 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
AC078883.3-202ENST00000417539 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
AC078883.3-202ENST00000417539 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
AC078883.3-202ENST00000417539 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
AC078883.3-202ENST00000417539 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
AC078883.3-202ENST00000417539 SYNJ1O43426 1573 aa16.27■□□□□ 0.2
AC078883.3-202ENST00000417539 TOP2BQ02880 1626 aa16.27■□□□□ 0.19
AC078883.3-202ENST00000417539 SOGA1O94964 1423 aa16.26■□□□□ 0.19
AC078883.3-202ENST00000417539 WRNQ14191 1432 aaPredicted RBP eCLIP16.23■□□□□ 0.19
AC078883.3-202ENST00000417539 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
AC078883.3-202ENST00000417539 LOC105371045A0A1W2PR82 267 aa16.22■□□□□ 0.19
AC078883.3-202ENST00000417539 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
AC078883.3-202ENST00000417539 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
AC078883.3-202ENST00000417539 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
AC078883.3-202ENST00000417539 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
AC078883.3-202ENST00000417539 PBRM1Q86U86 1689 aa16.14■□□□□ 0.18
AC078883.3-202ENST00000417539 CHD1O14646 1710 aa16.14■□□□□ 0.17
AC078883.3-202ENST00000417539 PPP4R3CPQ6ZMV5 832 aa16.13■□□□□ 0.17
AC078883.3-202ENST00000417539 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
AC078883.3-202ENST00000417539 EEA1Q15075 1411 aa16.11■□□□□ 0.17
AC078883.3-202ENST00000417539 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
AC078883.3-202ENST00000417539 GRIN2BQ13224 1484 aa16.08■□□□□ 0.16
AC078883.3-202ENST00000417539 HOXD11P31277 338 aaPredicted RBP16.07■□□□□ 0.16
AC078883.3-202ENST00000417539 SNAPC4Q5SXM2 1469 aa16.07■□□□□ 0.16
AC078883.3-202ENST00000417539 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
AC078883.3-202ENST00000417539 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
AC078883.3-202ENST00000417539 SYNJ2O15056 1496 aa15.98■□□□□ 0.15
AC078883.3-202ENST00000417539 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms