RNA–Protein interactions for RNA: ENST00000417403.5

ABCA13-202, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-202ENST00000417403 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
ABCA13-202ENST00000417403 CCDC180Q9P1Z9 1646 aa14□□□□□ -0.17
ABCA13-202ENST00000417403 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
ABCA13-202ENST00000417403 DCAF1Q9Y4B6 1507 aa13.24□□□□□ -0.29
ABCA13-202ENST00000417403 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
ABCA13-202ENST00000417403 ABCC9O60706 1549 aa13.06□□□□□ -0.32
ABCA13-202ENST00000417403 NACADO15069 1562 aa12.94□□□□□ -0.34
ABCA13-202ENST00000417403 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
ABCA13-202ENST00000417403 RB1CC1Q8TDY2 1594 aa12.8□□□□□ -0.36
ABCA13-202ENST00000417403 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
ABCA13-202ENST00000417403 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.38
ABCA13-202ENST00000417403 DCAF8L2P0C7V8 631 aa12.68□□□□□ -0.38
ABCA13-202ENST00000417403 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
ABCA13-202ENST00000417403 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
ABCA13-202ENST00000417403 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
ABCA13-202ENST00000417403 RSF1Q96T23 1441 aaPredicted RBP12.31□□□□□ -0.44
ABCA13-202ENST00000417403 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
ABCA13-202ENST00000417403 WIZO95785 1651 aa12.26□□□□□ -0.45
ABCA13-202ENST00000417403 BAZ1AQ9NRL2 1556 aaPredicted RBP12.25□□□□□ -0.45
ABCA13-202ENST00000417403 PEG3Q9GZU2 1588 aa12.24□□□□□ -0.45
ABCA13-202ENST00000417403 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
ABCA13-202ENST00000417403 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
ABCA13-202ENST00000417403 CHIC1Q5VXU3 224 aa12.11□□□□□ -0.47
ABCA13-202ENST00000417403 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.47
ABCA13-202ENST00000417403 TOP2AP11388 1531 aaKnown RBP12.08□□□□□ -0.48
ABCA13-202ENST00000417403 ATAD2BQ9ULI0 1458 aa12.04□□□□□ -0.48
ABCA13-202ENST00000417403 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
ABCA13-202ENST00000417403 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
ABCA13-202ENST00000417403 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.49
ABCA13-202ENST00000417403 NCAPD3P42695 1498 aa11.95□□□□□ -0.5
ABCA13-202ENST00000417403 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
ABCA13-202ENST00000417403 SLC24A1O60721 1099 aa11.9□□□□□ -0.51
ABCA13-202ENST00000417403 BAZ1BQ9UIG0 1483 aaKnown RBP11.87□□□□□ -0.51
ABCA13-202ENST00000417403 PRDM2Q13029 1718 aa11.78□□□□□ -0.52
ABCA13-202ENST00000417403 DNAJC5BQ9UF47 199 aa11.7□□□□□ -0.54
ABCA13-202ENST00000417403 CFTRP13569 1480 aa11.68□□□□□ -0.54
ABCA13-202ENST00000417403 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
ABCA13-202ENST00000417403 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
ABCA13-202ENST00000417403 BIVM-ERCC5R4GMW8 1640 aa11.6□□□□□ -0.55
ABCA13-202ENST00000417403 AEBP2Q6ZN18 517 aaPredicted RBP11.57□□□□□ -0.56
ABCA13-202ENST00000417403 NESP48681 1621 aa11.56□□□□□ -0.56
ABCA13-202ENST00000417403 TOP2BQ02880 1626 aa11.56□□□□□ -0.56
ABCA13-202ENST00000417403 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
ABCA13-202ENST00000417403 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
ABCA13-202ENST00000417403 CUX1P39880 1505 aa11.54□□□□□ -0.56
ABCA13-202ENST00000417403 KIF21AQ7Z4S6 1674 aa11.53□□□□□ -0.56
ABCA13-202ENST00000417403 WRNQ14191 1432 aaPredicted RBP eCLIP11.48□□□□□ -0.57
ABCA13-202ENST00000417403 EHMT2Q96KQ7 1210 aa11.44□□□□□ -0.58
ABCA13-202ENST00000417403 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
ABCA13-202ENST00000417403 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
ABCA13-202ENST00000417403 RUSC2Q8N2Y8 1516 aa11.42□□□□□ -0.58
ABCA13-202ENST00000417403 URB2Q14146 1524 aaKnown RBP11.41□□□□□ -0.58
ABCA13-202ENST00000417403 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.58
ABCA13-202ENST00000417403 SOGA1O94964 1423 aa11.39□□□□□ -0.59
ABCA13-202ENST00000417403 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
ABCA13-202ENST00000417403 TOPBP1Q92547 1522 aa11.37□□□□□ -0.59
ABCA13-202ENST00000417403 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
ABCA13-202ENST00000417403 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
ABCA13-202ENST00000417403 CEP164Q9UPV0 1460 aa11.34□□□□□ -0.59
ABCA13-202ENST00000417403 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
ABCA13-202ENST00000417403 WDR62O43379 1518 aa11.32□□□□□ -0.6
ABCA13-202ENST00000417403 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
ABCA13-202ENST00000417403 PDS5BQ9NTI5 1447 aa11.29□□□□□ -0.6
ABCA13-202ENST00000417403 ABCA5Q8WWZ7 1642 aa11.29□□□□□ -0.6
ABCA13-202ENST00000417403 KIF21BO75037 1637 aa11.28□□□□□ -0.6
ABCA13-202ENST00000417403 CUX2O14529 1486 aa11.27□□□□□ -0.61
ABCA13-202ENST00000417403 ABCA10Q8WWZ4 1543 aa11.27□□□□□ -0.61
ABCA13-202ENST00000417403 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
ABCA13-202ENST00000417403 EEA1Q15075 1411 aa11.25□□□□□ -0.61
ABCA13-202ENST00000417403 RAD54L2Q9Y4B4 1467 aa11.24□□□□□ -0.61
ABCA13-202ENST00000417403 PRXQ9BXM0 1461 aa11.23□□□□□ -0.61
ABCA13-202ENST00000417403 LOC105371045A0A1W2PR82 267 aa11.23□□□□□ -0.61
ABCA13-202ENST00000417403 PBRM1Q86U86 1689 aa11.19□□□□□ -0.62
ABCA13-202ENST00000417403 PLPPR3Q6T4P5 718 aa11.19□□□□□ -0.62
ABCA13-202ENST00000417403 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
ABCA13-202ENST00000417403 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
ABCA13-202ENST00000417403 IGF1RP08069 1367 aa11.15□□□□□ -0.62
ABCA13-202ENST00000417403 KIF27Q86VH2 1401 aa11.13□□□□□ -0.63
ABCA13-202ENST00000417403 CUL7Q14999 1698 aa11.13□□□□□ -0.63
ABCA13-202ENST00000417403 EIF4G3O43432 1585 aaKnown RBP11.13□□□□□ -0.63
ABCA13-202ENST00000417403 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
ABCA13-202ENST00000417403 ZNF608Q9ULD9 1512 aaPredicted RBP11.12□□□□□ -0.63
ABCA13-202ENST00000417403 FAM9AQ8IZU1 332 aaPredicted RBP11.12□□□□□ -0.63
ABCA13-202ENST00000417403 GOLGA3Q08378 1498 aa11.11□□□□□ -0.63
ABCA13-202ENST00000417403 IFT140Q96RY7 1462 aa11.09□□□□□ -0.63
ABCA13-202ENST00000417403 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
ABCA13-202ENST00000417403 ADAMTS12P58397 1594 aa11.08□□□□□ -0.64
ABCA13-202ENST00000417403 TNIKQ9UKE5 1360 aa11.08□□□□□ -0.64
ABCA13-202ENST00000417403 ERCC6Q03468 1493 aa11.07□□□□□ -0.64
ABCA13-202ENST00000417403 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
ABCA13-202ENST00000417403 GAPVD1Q14C86 1478 aa11.07□□□□□ -0.64
ABCA13-202ENST00000417403 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.64
ABCA13-202ENST00000417403 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
ABCA13-202ENST00000417403 CEP162Q5TB80 1403 aa11.02□□□□□ -0.65
ABCA13-202ENST00000417403 CARMIL1Q5VZK9 1371 aa10.99□□□□□ -0.65
ABCA13-202ENST00000417403 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
ABCA13-202ENST00000417403 GRIN2BQ13224 1484 aa10.98□□□□□ -0.65
ABCA13-202ENST00000417403 ARAP1Q96P48 1450 aa10.98□□□□□ -0.65
ABCA13-202ENST00000417403 SAMD9Q5K651 1589 aa10.97□□□□□ -0.65
ABCA13-202ENST00000417403 ARHGAP35Q9NRY4 1499 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms