RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 NISCHQ9Y2I1 1504 aa46.76■■■■■ 5.08
SLC39A1-206ENST00000417348 CCDC180Q9P1Z9 1646 aa41.61■■■■■ 4.25
SLC39A1-206ENST00000417348 ABCC9O60706 1549 aa40.2■■■■■ 4.03
SLC39A1-206ENST00000417348 MYO15BQ96JP2 1530 aa39.08■■■■□ 3.85
SLC39A1-206ENST00000417348 NACADO15069 1562 aa39.08■■■■□ 3.85
SLC39A1-206ENST00000417348 ZCCHC6Q5VYS8 1495 aaKnown RBP39.01■■■■□ 3.84
SLC39A1-206ENST00000417348 RB1CC1Q8TDY2 1594 aa39■■■■□ 3.83
SLC39A1-206ENST00000417348 DCAF1Q9Y4B6 1507 aa38.91■■■■□ 3.82
SLC39A1-206ENST00000417348 DCAF8L2P0C7V8 631 aa38.63■■■■□ 3.77
SLC39A1-206ENST00000417348 UNC13AQ9UPW8 1703 aa37.98■■■■□ 3.67
SLC39A1-206ENST00000417348 BICRAQ9NZM4 1560 aa37.72■■■■□ 3.63
SLC39A1-206ENST00000417348 SHROOM4Q9ULL8 1493 aa37.69■■■■□ 3.62
SLC39A1-206ENST00000417348 SCRIBQ14160 1630 aa37.67■■■■□ 3.62
SLC39A1-206ENST00000417348 PABPN1Q86U42 306 aaKnown RBP eCLIP37.51■■■■□ 3.6
SLC39A1-206ENST00000417348 EIF4G1Q04637 1599 aaKnown RBP36.74■■■■□ 3.47
SLC39A1-206ENST00000417348 DNAJC5BQ9UF47 199 aa36.68■■■■□ 3.46
SLC39A1-206ENST00000417348 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
SLC39A1-206ENST00000417348 BAZ1AQ9NRL2 1556 aaPredicted RBP36.28■■■■□ 3.4
SLC39A1-206ENST00000417348 CECR2Q9BXF3 1484 aa36.24■■■■□ 3.39
SLC39A1-206ENST00000417348 SMARCA4P51532 1647 aa36.21■■■■□ 3.39
SLC39A1-206ENST00000417348 SMARCA2P51531 1590 aa36.04■■■■□ 3.36
SLC39A1-206ENST00000417348 NCAPD3P42695 1498 aa36.04■■■■□ 3.36
SLC39A1-206ENST00000417348 PEG3Q9GZU2 1588 aa36.02■■■■□ 3.36
SLC39A1-206ENST00000417348 ATAD2BQ9ULI0 1458 aa35.99■■■■□ 3.35
SLC39A1-206ENST00000417348 MROH2BQ7Z745 1585 aa35.92■■■■□ 3.34
SLC39A1-206ENST00000417348 HMGXB3Q12766 1538 aa35.88■■■■□ 3.33
SLC39A1-206ENST00000417348 BAZ1BQ9UIG0 1483 aaKnown RBP35.67■■■■□ 3.3
SLC39A1-206ENST00000417348 RSF1Q96T23 1441 aaPredicted RBP35.64■■■■□ 3.3
SLC39A1-206ENST00000417348 WIZO95785 1651 aa35.5■■■■□ 3.27
SLC39A1-206ENST00000417348 TOP2AP11388 1531 aaKnown RBP35.29■■■■□ 3.24
SLC39A1-206ENST00000417348 LAMC3Q9Y6N6 1575 aa35.04■■■■□ 3.2
SLC39A1-206ENST00000417348 CADPSQ9ULU8 1353 aa34.93■■■■□ 3.18
SLC39A1-206ENST00000417348 NESP48681 1621 aa34.82■■■■□ 3.16
SLC39A1-206ENST00000417348 CCDC88BA6NC98 1476 aa34.79■■■■□ 3.16
SLC39A1-206ENST00000417348 CFTRP13569 1480 aa34.79■■■■□ 3.16
SLC39A1-206ENST00000417348 PDS5BQ9NTI5 1447 aa34.79■■■■□ 3.16
SLC39A1-206ENST00000417348 ERCC6Q03468 1493 aa34.71■■■■□ 3.15
SLC39A1-206ENST00000417348 SUPT5HO00267 1087 aaKnown RBP34.61■■■■□ 3.13
SLC39A1-206ENST00000417348 PRDM2Q13029 1718 aa34.54■■■■□ 3.12
SLC39A1-206ENST00000417348 KIF21AQ7Z4S6 1674 aa34.48■■■■□ 3.11
SLC39A1-206ENST00000417348 CUX2O14529 1486 aa34.48■■■■□ 3.11
SLC39A1-206ENST00000417348 FANCD2Q9BXW9 1451 aa34.46■■■■□ 3.11
SLC39A1-206ENST00000417348 THOC2Q8NI27 1593 aaKnown RBP34.42■■■■□ 3.1
SLC39A1-206ENST00000417348 CEP164Q9UPV0 1460 aa34.42■■■■□ 3.1
SLC39A1-206ENST00000417348 MRC2Q9UBG0 1479 aa34.35■■■■□ 3.09
SLC39A1-206ENST00000417348 WDR62O43379 1518 aa34.27■■■■□ 3.08
SLC39A1-206ENST00000417348 ABCC8Q09428 1581 aa34.15■■■■□ 3.06
SLC39A1-206ENST00000417348 URB2Q14146 1524 aaKnown RBP34.06■■■■□ 3.04
SLC39A1-206ENST00000417348 DNMBPQ6XZF7 1577 aa33.96■■■■□ 3.03
SLC39A1-206ENST00000417348 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
SLC39A1-206ENST00000417348 IFT140Q96RY7 1462 aa33.76■■■□□ 2.99
SLC39A1-206ENST00000417348 CUX1P39880 1505 aa33.7■■■□□ 2.99
SLC39A1-206ENST00000417348 POLA1P09884 1462 aaPredicted RBP33.66■■■□□ 2.98
SLC39A1-206ENST00000417348 WRNQ14191 1432 aaPredicted RBP eCLIP33.62■■■□□ 2.97
SLC39A1-206ENST00000417348 TARBP1Q13395 1621 aaKnown RBP33.57■■■□□ 2.97
SLC39A1-206ENST00000417348 TOP2BQ02880 1626 aa33.57■■■□□ 2.96
SLC39A1-206ENST00000417348 FGD5Q6ZNL6 1462 aa33.56■■■□□ 2.96
SLC39A1-206ENST00000417348 WDR97A6NE52 1622 aa33.56■■■□□ 2.96
SLC39A1-206ENST00000417348 BIVM-ERCC5R4GMW8 1640 aa33.56■■■□□ 2.96
SLC39A1-206ENST00000417348 SOGA1O94964 1423 aa33.52■■■□□ 2.96
SLC39A1-206ENST00000417348 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
SLC39A1-206ENST00000417348 ZNF608Q9ULD9 1512 aaPredicted RBP33.4■■■□□ 2.94
SLC39A1-206ENST00000417348 RAD54L2Q9Y4B4 1467 aa33.38■■■□□ 2.93
SLC39A1-206ENST00000417348 ABCA10Q8WWZ4 1543 aa33.38■■■□□ 2.93
SLC39A1-206ENST00000417348 EIF4G3O43432 1585 aaKnown RBP33.36■■■□□ 2.93
SLC39A1-206ENST00000417348 AQRO60306 1485 aaKnown RBP eCLIP33.25■■■□□ 2.912e-6■■■■■ 26.9
SLC39A1-206ENST00000417348 TDRD9Q8NDG6 1382 aaKnown RBP33.2■■■□□ 2.9
SLC39A1-206ENST00000417348 ABCA5Q8WWZ7 1642 aa33.18■■■□□ 2.9
SLC39A1-206ENST00000417348 GRIN2BQ13224 1484 aa33.17■■■□□ 2.9
SLC39A1-206ENST00000417348 GAPVD1Q14C86 1478 aa33.15■■■□□ 2.9
SLC39A1-206ENST00000417348 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
SLC39A1-206ENST00000417348 DNAJC5Q9H3Z4 198 aa33.09■■■□□ 2.89
SLC39A1-206ENST00000417348 PBRM1Q86U86 1689 aa33.03■■■□□ 2.88
SLC39A1-206ENST00000417348 ERICH3Q5RHP9 1530 aa33.01■■■□□ 2.87
SLC39A1-206ENST00000417348 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
SLC39A1-206ENST00000417348 OSCARQ8IYS5 282 aa32.97■■■□□ 2.87
SLC39A1-206ENST00000417348 KIF27Q86VH2 1401 aa32.94■■■□□ 2.86
SLC39A1-206ENST00000417348 SYNJ2O15056 1496 aa32.93■■■□□ 2.86
SLC39A1-206ENST00000417348 CHD1O14646 1710 aa32.85■■■□□ 2.85
SLC39A1-206ENST00000417348 TRIM41Q8WV44 630 aa32.84■■■□□ 2.85
SLC39A1-206ENST00000417348 FHAD1B1AJZ9 1412 aa32.83■■■□□ 2.85
SLC39A1-206ENST00000417348 ADAMTS12P58397 1594 aa32.82■■■□□ 2.84
SLC39A1-206ENST00000417348 CHMP7Q8WUX9 453 aaPredicted RBP32.8■■■□□ 2.84
SLC39A1-206ENST00000417348 IGF1RP08069 1367 aa32.74■■■□□ 2.83
SLC39A1-206ENST00000417348 CUL7Q14999 1698 aa32.72■■■□□ 2.83
SLC39A1-206ENST00000417348 GRIN2AQ12879 1464 aa32.71■■■□□ 2.83
SLC39A1-206ENST00000417348 FBLN2P98095 1184 aa32.7■■■□□ 2.83
SLC39A1-206ENST00000417348 CLASP1Q7Z460 1538 aa32.62■■■□□ 2.81
SLC39A1-206ENST00000417348 NUP160Q12769 1436 aa32.61■■■□□ 2.81
SLC39A1-206ENST00000417348 EEA1Q15075 1411 aa32.56■■■□□ 2.8
SLC39A1-206ENST00000417348 CHIC1Q5VXU3 224 aa32.54■■■□□ 2.8
SLC39A1-206ENST00000417348 CARMIL1Q5VZK9 1371 aa32.54■■■□□ 2.8
SLC39A1-206ENST00000417348 CEP170Q5SW79 1584 aa32.48■■■□□ 2.79
SLC39A1-206ENST00000417348 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
SLC39A1-206ENST00000417348 RAPGEF2Q9Y4G8 1499 aa32.41■■■□□ 2.78
SLC39A1-206ENST00000417348 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
SLC39A1-206ENST00000417348 PRXQ9BXM0 1461 aa32.36■■■□□ 2.77
SLC39A1-206ENST00000417348 SHROOM2Q13796 1616 aa32.36■■■□□ 2.77
SLC39A1-206ENST00000417348 RIMBP3CA6NJZ7 1639 aa32.35■■■□□ 2.77
SLC39A1-206ENST00000417348 RIMBP3BA6NNM3 1639 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms