RNA–Protein interactions for RNA: ENST00000417250.1

SNRPCP9-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 9, humanhuman

BASIC

Gene SNRPCP9, Length 207 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP9-201ENST00000417250 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
SNRPCP9-201ENST00000417250 ABCC9O60706 1549 aa24.45■■□□□ 1.5
SNRPCP9-201ENST00000417250 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
SNRPCP9-201ENST00000417250 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
SNRPCP9-201ENST00000417250 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
SNRPCP9-201ENST00000417250 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
SNRPCP9-201ENST00000417250 NACADO15069 1562 aa22.93■■□□□ 1.26
SNRPCP9-201ENST00000417250 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
SNRPCP9-201ENST00000417250 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
SNRPCP9-201ENST00000417250 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
SNRPCP9-201ENST00000417250 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
SNRPCP9-201ENST00000417250 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
SNRPCP9-201ENST00000417250 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
SNRPCP9-201ENST00000417250 SCRIBQ14160 1630 aa22.07■■□□□ 1.12
SNRPCP9-201ENST00000417250 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
SNRPCP9-201ENST00000417250 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
SNRPCP9-201ENST00000417250 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
SNRPCP9-201ENST00000417250 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
SNRPCP9-201ENST00000417250 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
SNRPCP9-201ENST00000417250 NCAPD3P42695 1498 aa21.28■■□□□ 1
SNRPCP9-201ENST00000417250 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
SNRPCP9-201ENST00000417250 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
SNRPCP9-201ENST00000417250 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
SNRPCP9-201ENST00000417250 SMARCA4P51532 1647 aa21.03■□□□□ 0.96
SNRPCP9-201ENST00000417250 CUX2O14529 1486 aa21.01■□□□□ 0.95
SNRPCP9-201ENST00000417250 NESP48681 1621 aa20.98■□□□□ 0.95
SNRPCP9-201ENST00000417250 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
SNRPCP9-201ENST00000417250 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
SNRPCP9-201ENST00000417250 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
SNRPCP9-201ENST00000417250 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
SNRPCP9-201ENST00000417250 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
SNRPCP9-201ENST00000417250 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
SNRPCP9-201ENST00000417250 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
SNRPCP9-201ENST00000417250 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
SNRPCP9-201ENST00000417250 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
SNRPCP9-201ENST00000417250 WIZO95785 1651 aa20.55■□□□□ 0.88
SNRPCP9-201ENST00000417250 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.88
SNRPCP9-201ENST00000417250 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
SNRPCP9-201ENST00000417250 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
SNRPCP9-201ENST00000417250 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
SNRPCP9-201ENST00000417250 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
SNRPCP9-201ENST00000417250 CFTRP13569 1480 aa20.36■□□□□ 0.85
SNRPCP9-201ENST00000417250 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
SNRPCP9-201ENST00000417250 WDR62O43379 1518 aa20.34■□□□□ 0.85
SNRPCP9-201ENST00000417250 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
SNRPCP9-201ENST00000417250 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
SNRPCP9-201ENST00000417250 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
SNRPCP9-201ENST00000417250 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
SNRPCP9-201ENST00000417250 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
SNRPCP9-201ENST00000417250 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
SNRPCP9-201ENST00000417250 TOPBP1Q92547 1522 aa19.95■□□□□ 0.78
SNRPCP9-201ENST00000417250 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
SNRPCP9-201ENST00000417250 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.77
SNRPCP9-201ENST00000417250 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
SNRPCP9-201ENST00000417250 FBLN2P98095 1184 aa19.85■□□□□ 0.77
SNRPCP9-201ENST00000417250 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.77
SNRPCP9-201ENST00000417250 DNMBPQ6XZF7 1577 aa19.8■□□□□ 0.76
SNRPCP9-201ENST00000417250 TDRD9Q8NDG6 1382 aaKnown RBP19.77■□□□□ 0.76
SNRPCP9-201ENST00000417250 SOGA1O94964 1423 aa19.76■□□□□ 0.75
SNRPCP9-201ENST00000417250 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
SNRPCP9-201ENST00000417250 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
SNRPCP9-201ENST00000417250 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
SNRPCP9-201ENST00000417250 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
SNRPCP9-201ENST00000417250 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
SNRPCP9-201ENST00000417250 ARHGEF11O15085 1522 aa19.73■□□□□ 0.75
SNRPCP9-201ENST00000417250 TARBP1Q13395 1621 aaKnown RBP19.73■□□□□ 0.75
SNRPCP9-201ENST00000417250 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
SNRPCP9-201ENST00000417250 SUPT5HO00267 1087 aaKnown RBP19.67■□□□□ 0.74
SNRPCP9-201ENST00000417250 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
SNRPCP9-201ENST00000417250 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
SNRPCP9-201ENST00000417250 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
SNRPCP9-201ENST00000417250 CUX1P39880 1505 aa19.58■□□□□ 0.73
SNRPCP9-201ENST00000417250 CHD1O14646 1710 aa19.56■□□□□ 0.72
SNRPCP9-201ENST00000417250 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
SNRPCP9-201ENST00000417250 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
SNRPCP9-201ENST00000417250 GRIN2BQ13224 1484 aa19.51■□□□□ 0.71
SNRPCP9-201ENST00000417250 MAGI1Q96QZ7 1491 aaPredicted RBP19.47■□□□□ 0.71
SNRPCP9-201ENST00000417250 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
SNRPCP9-201ENST00000417250 SYNJ2O15056 1496 aa19.43■□□□□ 0.7
SNRPCP9-201ENST00000417250 WDR97A6NE52 1622 aa19.41■□□□□ 0.7
SNRPCP9-201ENST00000417250 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
SNRPCP9-201ENST00000417250 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
SNRPCP9-201ENST00000417250 ABCA10Q8WWZ4 1543 aa19.37■□□□□ 0.69
SNRPCP9-201ENST00000417250 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
SNRPCP9-201ENST00000417250 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
SNRPCP9-201ENST00000417250 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
SNRPCP9-201ENST00000417250 GRIN2AQ12879 1464 aa19.23■□□□□ 0.67
SNRPCP9-201ENST00000417250 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
SNRPCP9-201ENST00000417250 NUP160Q12769 1436 aa19.19■□□□□ 0.66
SNRPCP9-201ENST00000417250 JPH4Q96JJ6 628 aa19.19■□□□□ 0.66
SNRPCP9-201ENST00000417250 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
SNRPCP9-201ENST00000417250 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
SNRPCP9-201ENST00000417250 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
SNRPCP9-201ENST00000417250 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
SNRPCP9-201ENST00000417250 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
SNRPCP9-201ENST00000417250 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
SNRPCP9-201ENST00000417250 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.65
SNRPCP9-201ENST00000417250 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
SNRPCP9-201ENST00000417250 IGF1RP08069 1367 aa19.03■□□□□ 0.64
SNRPCP9-201ENST00000417250 SHROOM2Q13796 1616 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms