RNA–Protein interactions for RNA: ENST00000417231.5

UBE2F-207, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 984 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-207ENST00000417231 NISCHQ9Y2I1 1504 aa48.9■■■■■ 5.42
UBE2F-207ENST00000417231 CCDC180Q9P1Z9 1646 aa43.51■■■■■ 4.56
UBE2F-207ENST00000417231 ABCC9O60706 1549 aa43.46■■■■■ 4.55
UBE2F-207ENST00000417231 DCAF8L2P0C7V8 631 aa41.43■■■■■ 4.22
UBE2F-207ENST00000417231 RB1CC1Q8TDY2 1594 aa41.36■■■■■ 4.21
UBE2F-207ENST00000417231 NACADO15069 1562 aa41.16■■■■■ 4.18
UBE2F-207ENST00000417231 PABPN1Q86U42 306 aaKnown RBP eCLIP40.67■■■■■ 4.1
UBE2F-207ENST00000417231 MYO15BQ96JP2 1530 aa40.67■■■■■ 4.1
UBE2F-207ENST00000417231 DNAJC5BQ9UF47 199 aa40.57■■■■■ 4.09
UBE2F-207ENST00000417231 ZCCHC6Q5VYS8 1495 aaKnown RBP40.57■■■■■ 4.08
UBE2F-207ENST00000417231 UNC13AQ9UPW8 1703 aa40.33■■■■■ 4.05
UBE2F-207ENST00000417231 DCAF1Q9Y4B6 1507 aa40.31■■■■■ 4.04
UBE2F-207ENST00000417231 BICRAQ9NZM4 1560 aa40.18■■■■■ 4.02
UBE2F-207ENST00000417231 SCRIBQ14160 1630 aa39.87■■■■□ 3.97
UBE2F-207ENST00000417231 SHROOM4Q9ULL8 1493 aa39.53■■■■□ 3.92
UBE2F-207ENST00000417231 EIF4G1Q04637 1599 aaKnown RBP39.16■■■■□ 3.86
UBE2F-207ENST00000417231 CC2D2AQ9P2K1 1620 aa39.16■■■■□ 3.86
UBE2F-207ENST00000417231 CECR2Q9BXF3 1484 aa39.06■■■■□ 3.84
UBE2F-207ENST00000417231 NCAPD3P42695 1498 aa38.08■■■■□ 3.69
UBE2F-207ENST00000417231 ATAD2BQ9ULI0 1458 aa38.03■■■■□ 3.68
UBE2F-207ENST00000417231 SMARCA4P51532 1647 aa38.01■■■■□ 3.67
UBE2F-207ENST00000417231 BAZ1AQ9NRL2 1556 aaPredicted RBP37.89■■■■□ 3.66
UBE2F-207ENST00000417231 SMARCA2P51531 1590 aa37.86■■■■□ 3.65
UBE2F-207ENST00000417231 MROH2BQ7Z745 1585 aa37.74■■■■□ 3.63
UBE2F-207ENST00000417231 HMGXB3Q12766 1538 aa37.72■■■■□ 3.63
UBE2F-207ENST00000417231 BAZ1BQ9UIG0 1483 aaKnown RBP37.67■■■■□ 3.62
UBE2F-207ENST00000417231 PEG3Q9GZU2 1588 aa37.59■■■■□ 3.61
UBE2F-207ENST00000417231 ERCC6Q03468 1493 aa37.45■■■■□ 3.59
UBE2F-207ENST00000417231 NESP48681 1621 aa37.44■■■■□ 3.58
UBE2F-207ENST00000417231 WIZO95785 1651 aa37.25■■■■□ 3.55
UBE2F-207ENST00000417231 CUX2O14529 1486 aa37.15■■■■□ 3.54
UBE2F-207ENST00000417231 RSF1Q96T23 1441 aaPredicted RBP37.12■■■■□ 3.53
UBE2F-207ENST00000417231 LAMC3Q9Y6N6 1575 aa37.07■■■■□ 3.52
UBE2F-207ENST00000417231 CADPSQ9ULU8 1353 aa36.99■■■■□ 3.51
UBE2F-207ENST00000417231 PDS5BQ9NTI5 1447 aa36.95■■■■□ 3.51
UBE2F-207ENST00000417231 DNAJC5Q9H3Z4 198 aa36.89■■■■□ 3.5
UBE2F-207ENST00000417231 THOC2Q8NI27 1593 aaKnown RBP36.81■■■■□ 3.48
UBE2F-207ENST00000417231 KIF21AQ7Z4S6 1674 aa36.8■■■■□ 3.48
UBE2F-207ENST00000417231 TOP2AP11388 1531 aaKnown RBP36.77■■■■□ 3.48
UBE2F-207ENST00000417231 CFTRP13569 1480 aa36.6■■■■□ 3.45
UBE2F-207ENST00000417231 MRC2Q9UBG0 1479 aa36.58■■■■□ 3.45
UBE2F-207ENST00000417231 FANCD2Q9BXW9 1451 aa36.55■■■■□ 3.44
UBE2F-207ENST00000417231 CEP164Q9UPV0 1460 aa36.51■■■■□ 3.44
UBE2F-207ENST00000417231 CCDC88BA6NC98 1476 aa36.47■■■■□ 3.43
UBE2F-207ENST00000417231 WDR62O43379 1518 aa36.42■■■■□ 3.42
UBE2F-207ENST00000417231 URB2Q14146 1524 aaKnown RBP36.22■■■■□ 3.39
UBE2F-207ENST00000417231 PRDM2Q13029 1718 aa36■■■■□ 3.35
UBE2F-207ENST00000417231 SUPT5HO00267 1087 aaKnown RBP35.96■■■■□ 3.35
UBE2F-207ENST00000417231 TOPBP1Q92547 1522 aa35.88■■■■□ 3.33
UBE2F-207ENST00000417231 IFT140Q96RY7 1462 aa35.77■■■■□ 3.32
UBE2F-207ENST00000417231 ABCC8Q09428 1581 aa35.76■■■■□ 3.32
UBE2F-207ENST00000417231 ZNF608Q9ULD9 1512 aaPredicted RBP35.76■■■■□ 3.31
UBE2F-207ENST00000417231 DNMBPQ6XZF7 1577 aa35.72■■■■□ 3.31
UBE2F-207ENST00000417231 OSCARQ8IYS5 282 aa35.71■■■■□ 3.31
UBE2F-207ENST00000417231 POLA1P09884 1462 aaPredicted RBP35.54■■■■□ 3.28
UBE2F-207ENST00000417231 TRIM41Q8WV44 630 aa35.53■■■■□ 3.28
UBE2F-207ENST00000417231 AQRO60306 1485 aaKnown RBP eCLIP35.53■■■■□ 3.283e-6■■■□□ 18.3
UBE2F-207ENST00000417231 RAD54L2Q9Y4B4 1467 aa35.49■■■■□ 3.27
UBE2F-207ENST00000417231 TARBP1Q13395 1621 aaKnown RBP35.47■■■■□ 3.27
UBE2F-207ENST00000417231 SOGA1O94964 1423 aa35.47■■■■□ 3.27
UBE2F-207ENST00000417231 EIF4G3O43432 1585 aaKnown RBP35.44■■■■□ 3.26
UBE2F-207ENST00000417231 CUX1P39880 1505 aa35.4■■■■□ 3.26
UBE2F-207ENST00000417231 TDRD9Q8NDG6 1382 aaKnown RBP35.39■■■■□ 3.26
UBE2F-207ENST00000417231 FGD5Q6ZNL6 1462 aa35.39■■■■□ 3.26
UBE2F-207ENST00000417231 FBLN2P98095 1184 aa35.32■■■■□ 3.24
UBE2F-207ENST00000417231 SNAPC4Q5SXM2 1469 aa35.09■■■■□ 3.21
UBE2F-207ENST00000417231 CHD1O14646 1710 aa35.07■■■■□ 3.2
UBE2F-207ENST00000417231 CHMP7Q8WUX9 453 aaPredicted RBP35.06■■■■□ 3.2
UBE2F-207ENST00000417231 RIMBP3CA6NJZ7 1639 aa35.04■■■■□ 3.2
UBE2F-207ENST00000417231 RIMBP3BA6NNM3 1639 aa35.04■■■■□ 3.2
UBE2F-207ENST00000417231 RIMBP3Q9UFD9 1639 aa35.04■■■■□ 3.2
UBE2F-207ENST00000417231 GRIN2BQ13224 1484 aa35.03■■■■□ 3.2
UBE2F-207ENST00000417231 ARHGEF11O15085 1522 aa35.01■■■■□ 3.19
UBE2F-207ENST00000417231 WDR97A6NE52 1622 aa35■■■■□ 3.19
UBE2F-207ENST00000417231 WRNQ14191 1432 aaPredicted RBP eCLIP34.99■■■■□ 3.19
UBE2F-207ENST00000417231 GAPVD1Q14C86 1478 aa34.98■■■■□ 3.19
UBE2F-207ENST00000417231 ABCA10Q8WWZ4 1543 aa34.96■■■■□ 3.19
UBE2F-207ENST00000417231 MAGI1Q96QZ7 1491 aaPredicted RBP34.95■■■■□ 3.19
UBE2F-207ENST00000417231 CYB5RLQ6IPT4 315 aa34.92■■■■□ 3.18
UBE2F-207ENST00000417231 SYNJ1O43426 1573 aa34.89■■■■□ 3.18
UBE2F-207ENST00000417231 TOP2BQ02880 1626 aa34.87■■■■□ 3.17
UBE2F-207ENST00000417231 SYNJ2O15056 1496 aa34.86■■■■□ 3.17
UBE2F-207ENST00000417231 BIVM-ERCC5R4GMW8 1640 aa34.81■■■■□ 3.16
UBE2F-207ENST00000417231 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
UBE2F-207ENST00000417231 PBRM1Q86U86 1689 aa34.78■■■■□ 3.16
UBE2F-207ENST00000417231 CLASP1Q7Z460 1538 aa34.72■■■■□ 3.15
UBE2F-207ENST00000417231 ARAP1Q96P48 1450 aa34.71■■■■□ 3.15
UBE2F-207ENST00000417231 GRIN2AQ12879 1464 aa34.58■■■■□ 3.13
UBE2F-207ENST00000417231 FHAD1B1AJZ9 1412 aa34.55■■■■□ 3.12
UBE2F-207ENST00000417231 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
UBE2F-207ENST00000417231 ERICH3Q5RHP9 1530 aa34.5■■■■□ 3.11
UBE2F-207ENST00000417231 NUP160Q12769 1436 aa34.44■■■■□ 3.1
UBE2F-207ENST00000417231 CEP170Q5SW79 1584 aa34.42■■■■□ 3.1
UBE2F-207ENST00000417231 TRHP20396 242 aaPredicted RBP34.42■■■■□ 3.1
UBE2F-207ENST00000417231 ERCC6L2Q5T890 1561 aa34.32■■■■□ 3.09
UBE2F-207ENST00000417231 IGF1RP08069 1367 aa34.31■■■■□ 3.08
UBE2F-207ENST00000417231 KIF27Q86VH2 1401 aa34.3■■■■□ 3.08
UBE2F-207ENST00000417231 JPH4Q96JJ6 628 aa34.24■■■■□ 3.07
UBE2F-207ENST00000417231 PRG4Q92954 1404 aaPredicted RBP34.17■■■■□ 3.06
UBE2F-207ENST00000417231 SHROOM2Q13796 1616 aa34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms