RNA–Protein interactions for RNA: ENST00000417135.1

LINC02247-201, Transcript of long intergenic non-protein coding RNA 2247, humanhuman

TSL 3 BASIC

Gene LINC02247, Length 743 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02247-201ENST00000417135 NISCHQ9Y2I1 1504 aa44.23■■■■■ 4.67
LINC02247-201ENST00000417135 ABCC9O60706 1549 aa39.66■■■■□ 3.94
LINC02247-201ENST00000417135 CCDC180Q9P1Z9 1646 aa39.59■■■■□ 3.93
LINC02247-201ENST00000417135 RB1CC1Q8TDY2 1594 aa37.75■■■■□ 3.63
LINC02247-201ENST00000417135 DCAF8L2P0C7V8 631 aa37.52■■■■□ 3.6
LINC02247-201ENST00000417135 NACADO15069 1562 aa37.49■■■■□ 3.59
LINC02247-201ENST00000417135 DNAJC5BQ9UF47 199 aa37.15■■■■□ 3.54
LINC02247-201ENST00000417135 PABPN1Q86U42 306 aaKnown RBP eCLIP37■■■■□ 3.51
LINC02247-201ENST00000417135 MYO15BQ96JP2 1530 aa36.96■■■■□ 3.51
LINC02247-201ENST00000417135 UNC13AQ9UPW8 1703 aa36.75■■■■□ 3.47
LINC02247-201ENST00000417135 ZCCHC6Q5VYS8 1495 aaKnown RBP36.64■■■■□ 3.46
LINC02247-201ENST00000417135 BICRAQ9NZM4 1560 aa36.57■■■■□ 3.44
LINC02247-201ENST00000417135 DCAF1Q9Y4B6 1507 aa36.51■■■■□ 3.44
LINC02247-201ENST00000417135 SCRIBQ14160 1630 aa36.16■■■■□ 3.38
LINC02247-201ENST00000417135 SHROOM4Q9ULL8 1493 aa36.14■■■■□ 3.38
LINC02247-201ENST00000417135 CC2D2AQ9P2K1 1620 aa35.78■■■■□ 3.32
LINC02247-201ENST00000417135 CECR2Q9BXF3 1484 aa35.73■■■■□ 3.31
LINC02247-201ENST00000417135 EIF4G1Q04637 1599 aaKnown RBP35.72■■■■□ 3.31
LINC02247-201ENST00000417135 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
LINC02247-201ENST00000417135 ATAD2BQ9ULI0 1458 aa34.52■■■■□ 3.12
LINC02247-201ENST00000417135 SMARCA4P51532 1647 aa34.46■■■■□ 3.11
LINC02247-201ENST00000417135 SMARCA2P51531 1590 aa34.45■■■■□ 3.1
LINC02247-201ENST00000417135 BAZ1AQ9NRL2 1556 aaPredicted RBP34.34■■■■□ 3.09
LINC02247-201ENST00000417135 HMGXB3Q12766 1538 aa34.34■■■■□ 3.09
LINC02247-201ENST00000417135 ERCC6Q03468 1493 aa34.3■■■■□ 3.08
LINC02247-201ENST00000417135 BAZ1BQ9UIG0 1483 aaKnown RBP34.22■■■■□ 3.07
LINC02247-201ENST00000417135 CUX2O14529 1486 aa34.15■■■■□ 3.06
LINC02247-201ENST00000417135 DNAJC5Q9H3Z4 198 aa34.13■■■■□ 3.05
LINC02247-201ENST00000417135 PEG3Q9GZU2 1588 aa34.1■■■■□ 3.05
LINC02247-201ENST00000417135 MROH2BQ7Z745 1585 aa34.07■■■■□ 3.05
LINC02247-201ENST00000417135 NESP48681 1621 aa34.05■■■■□ 3.04
LINC02247-201ENST00000417135 LAMC3Q9Y6N6 1575 aa33.82■■■■□ 3
LINC02247-201ENST00000417135 PDS5BQ9NTI5 1447 aa33.71■■■□□ 2.99
LINC02247-201ENST00000417135 WIZO95785 1651 aa33.64■■■□□ 2.98
LINC02247-201ENST00000417135 THOC2Q8NI27 1593 aaKnown RBP33.63■■■□□ 2.97
LINC02247-201ENST00000417135 CADPSQ9ULU8 1353 aa33.62■■■□□ 2.97
LINC02247-201ENST00000417135 KIF21AQ7Z4S6 1674 aa33.55■■■□□ 2.96
LINC02247-201ENST00000417135 RSF1Q96T23 1441 aaPredicted RBP33.42■■■□□ 2.94
LINC02247-201ENST00000417135 MRC2Q9UBG0 1479 aa33.36■■■□□ 2.93
LINC02247-201ENST00000417135 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
LINC02247-201ENST00000417135 TOP2AP11388 1531 aaKnown RBP33.24■■■□□ 2.91
LINC02247-201ENST00000417135 WDR62O43379 1518 aa33.23■■■□□ 2.91
LINC02247-201ENST00000417135 FANCD2Q9BXW9 1451 aa33.22■■■□□ 2.91
LINC02247-201ENST00000417135 CFTRP13569 1480 aa33.2■■■□□ 2.91
LINC02247-201ENST00000417135 CCDC88BA6NC98 1476 aa32.91■■■□□ 2.86
LINC02247-201ENST00000417135 URB2Q14146 1524 aaKnown RBP32.9■■■□□ 2.86
LINC02247-201ENST00000417135 PRDM2Q13029 1718 aa32.75■■■□□ 2.83
LINC02247-201ENST00000417135 TRIM41Q8WV44 630 aa32.73■■■□□ 2.83
LINC02247-201ENST00000417135 OSCARQ8IYS5 282 aa32.71■■■□□ 2.83
LINC02247-201ENST00000417135 IFT140Q96RY7 1462 aa32.6■■■□□ 2.81
LINC02247-201ENST00000417135 TOPBP1Q92547 1522 aa32.57■■■□□ 2.8
LINC02247-201ENST00000417135 ABCC8Q09428 1581 aa32.55■■■□□ 2.8
LINC02247-201ENST00000417135 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.79
LINC02247-201ENST00000417135 DNMBPQ6XZF7 1577 aa32.44■■■□□ 2.78
LINC02247-201ENST00000417135 EIF4G3O43432 1585 aaKnown RBP32.28■■■□□ 2.76
LINC02247-201ENST00000417135 AQRO60306 1485 aaKnown RBP eCLIP32.25■■■□□ 2.75
LINC02247-201ENST00000417135 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
LINC02247-201ENST00000417135 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
LINC02247-201ENST00000417135 SOGA1O94964 1423 aa32.16■■■□□ 2.74
LINC02247-201ENST00000417135 FBLN2P98095 1184 aa32.15■■■□□ 2.74
LINC02247-201ENST00000417135 RAD54L2Q9Y4B4 1467 aa32.14■■■□□ 2.74
LINC02247-201ENST00000417135 RIMBP3CA6NJZ7 1639 aa32.13■■■□□ 2.73
LINC02247-201ENST00000417135 RIMBP3BA6NNM3 1639 aa32.13■■■□□ 2.73
LINC02247-201ENST00000417135 RIMBP3Q9UFD9 1639 aa32.13■■■□□ 2.73
LINC02247-201ENST00000417135 SUPT5HO00267 1087 aaKnown RBP32.11■■■□□ 2.73
LINC02247-201ENST00000417135 TDRD9Q8NDG6 1382 aaKnown RBP32.09■■■□□ 2.73
LINC02247-201ENST00000417135 ARHGEF11O15085 1522 aa32.06■■■□□ 2.72
LINC02247-201ENST00000417135 FGD5Q6ZNL6 1462 aa32.05■■■□□ 2.72
LINC02247-201ENST00000417135 CUX1P39880 1505 aa32.01■■■□□ 2.72
LINC02247-201ENST00000417135 CHD1O14646 1710 aa32■■■□□ 2.71
LINC02247-201ENST00000417135 CYB5RLQ6IPT4 315 aa31.95■■■□□ 2.71
LINC02247-201ENST00000417135 WDR97A6NE52 1622 aa31.93■■■□□ 2.7
LINC02247-201ENST00000417135 SNAPC4Q5SXM2 1469 aa31.91■■■□□ 2.7
LINC02247-201ENST00000417135 CHMP7Q8WUX9 453 aaPredicted RBP31.9■■■□□ 2.7
LINC02247-201ENST00000417135 GRIN2BQ13224 1484 aa31.85■■■□□ 2.69
LINC02247-201ENST00000417135 MAGI1Q96QZ7 1491 aaPredicted RBP31.83■■■□□ 2.69
LINC02247-201ENST00000417135 GAPVD1Q14C86 1478 aa31.75■■■□□ 2.67
LINC02247-201ENST00000417135 ARAP1Q96P48 1450 aa31.74■■■□□ 2.67
LINC02247-201ENST00000417135 SYNJ2O15056 1496 aa31.72■■■□□ 2.67
LINC02247-201ENST00000417135 SYNJ1O43426 1573 aa31.72■■■□□ 2.67
LINC02247-201ENST00000417135 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.66
LINC02247-201ENST00000417135 CLASP1Q7Z460 1538 aa31.66■■■□□ 2.66
LINC02247-201ENST00000417135 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
LINC02247-201ENST00000417135 TRHP20396 242 aaPredicted RBP31.62■■■□□ 2.65
LINC02247-201ENST00000417135 PBRM1Q86U86 1689 aa31.62■■■□□ 2.65
LINC02247-201ENST00000417135 ABCA5Q8WWZ7 1642 aa31.58■■■□□ 2.65
LINC02247-201ENST00000417135 TOP2BQ02880 1626 aa31.5■■■□□ 2.63
LINC02247-201ENST00000417135 BIVM-ERCC5R4GMW8 1640 aa31.47■■■□□ 2.63
LINC02247-201ENST00000417135 GRIN2AQ12879 1464 aa31.41■■■□□ 2.62
LINC02247-201ENST00000417135 ADAMTS12P58397 1594 aa31.35■■■□□ 2.61
LINC02247-201ENST00000417135 FHAD1B1AJZ9 1412 aa31.35■■■□□ 2.61
LINC02247-201ENST00000417135 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
LINC02247-201ENST00000417135 NUP160Q12769 1436 aa31.29■■■□□ 2.6
LINC02247-201ENST00000417135 CEP170Q5SW79 1584 aa31.26■■■□□ 2.59
LINC02247-201ENST00000417135 ERCC6L2Q5T890 1561 aa31.18■■■□□ 2.58
LINC02247-201ENST00000417135 SHROOM2Q13796 1616 aa31.09■■■□□ 2.57
LINC02247-201ENST00000417135 JPH4Q96JJ6 628 aa31.08■■■□□ 2.57
LINC02247-201ENST00000417135 PRG4Q92954 1404 aaPredicted RBP31.05■■■□□ 2.56
LINC02247-201ENST00000417135 KIF27Q86VH2 1401 aa30.98■■■□□ 2.55
LINC02247-201ENST00000417135 IGF1RP08069 1367 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms