RNA–Protein interactions for RNA: ENST00000416258.5

NELFA-205, Transcript of negative elongation factor complex member A, humanhuman

TSL 5

Gene NELFA, Length 2,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-205ENST00000416258 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
NELFA-205ENST00000416258 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
NELFA-205ENST00000416258 ZCCHC6Q5VYS8 1495 aaKnown RBP35.36■■■■□ 3.25
NELFA-205ENST00000416258 DCAF1Q9Y4B6 1507 aa34.76■■■■□ 3.15
NELFA-205ENST00000416258 DCAF8L2P0C7V8 631 aa34.64■■■■□ 3.14
NELFA-205ENST00000416258 SHROOM4Q9ULL8 1493 aa34.43■■■■□ 3.1
NELFA-205ENST00000416258 ABCC9O60706 1549 aa34.41■■■■□ 3.1
NELFA-205ENST00000416258 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
NELFA-205ENST00000416258 NACADO15069 1562 aa34■■■■□ 3.03
NELFA-205ENST00000416258 RB1CC1Q8TDY2 1594 aa33.66■■■□□ 2.98
NELFA-205ENST00000416258 SCRIBQ14160 1630 aa33.65■■■□□ 2.98
NELFA-205ENST00000416258 SUPT5HO00267 1087 aaKnown RBP33.22■■■□□ 2.91
NELFA-205ENST00000416258 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
NELFA-205ENST00000416258 RSF1Q96T23 1441 aaPredicted RBP32.7■■■□□ 2.82
NELFA-205ENST00000416258 BICRAQ9NZM4 1560 aa32.68■■■□□ 2.82
NELFA-205ENST00000416258 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
NELFA-205ENST00000416258 MROH2BQ7Z745 1585 aa32.5■■■□□ 2.79
NELFA-205ENST00000416258 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
NELFA-205ENST00000416258 BAZ1AQ9NRL2 1556 aaPredicted RBP32.44■■■□□ 2.78
NELFA-205ENST00000416258 SMARCA4P51532 1647 aa32.27■■■□□ 2.76
NELFA-205ENST00000416258 WIZO95785 1651 aa32.24■■■□□ 2.75
NELFA-205ENST00000416258 CHIC1Q5VXU3 224 aa31.92■■■□□ 2.7
NELFA-205ENST00000416258 TOP2AP11388 1531 aaKnown RBP31.9■■■□□ 2.7
NELFA-205ENST00000416258 PEG3Q9GZU2 1588 aa31.88■■■□□ 2.69
NELFA-205ENST00000416258 ATAD2BQ9ULI0 1458 aa31.7■■■□□ 2.67
NELFA-205ENST00000416258 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
NELFA-205ENST00000416258 EIF4G1Q04637 1599 aaKnown RBP31.66■■■□□ 2.66
NELFA-205ENST00000416258 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
NELFA-205ENST00000416258 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
NELFA-205ENST00000416258 NCAPD3P42695 1498 aa31.4■■■□□ 2.62
NELFA-205ENST00000416258 HMGXB3Q12766 1538 aa31.36■■■□□ 2.61
NELFA-205ENST00000416258 TRIM41Q8WV44 630 aa31.22■■■□□ 2.59
NELFA-205ENST00000416258 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
NELFA-205ENST00000416258 ABCC8Q09428 1581 aa30.99■■■□□ 2.55
NELFA-205ENST00000416258 WRNQ14191 1432 aaPredicted RBP eCLIP30.76■■■□□ 2.51
NELFA-205ENST00000416258 CFTRP13569 1480 aa30.75■■■□□ 2.51
NELFA-205ENST00000416258 LOC105371045A0A1W2PR82 267 aa30.71■■■□□ 2.51
NELFA-205ENST00000416258 FAM9AQ8IZU1 332 aaPredicted RBP30.65■■■□□ 2.5
NELFA-205ENST00000416258 SYNJ1O43426 1573 aa30.64■■■□□ 2.49
NELFA-205ENST00000416258 CADPSQ9ULU8 1353 aa30.6■■■□□ 2.49
NELFA-205ENST00000416258 PRDM2Q13029 1718 aa30.6■■■□□ 2.49
NELFA-205ENST00000416258 TOP2BQ02880 1626 aa30.49■■■□□ 2.47
NELFA-205ENST00000416258 BIVM-ERCC5R4GMW8 1640 aa30.46■■■□□ 2.47
NELFA-205ENST00000416258 SOGA1O94964 1423 aa30.45■■■□□ 2.47
NELFA-205ENST00000416258 EEA1Q15075 1411 aa30.41■■■□□ 2.46
NELFA-205ENST00000416258 CUX1P39880 1505 aa30.37■■■□□ 2.45
NELFA-205ENST00000416258 RUSC2Q8N2Y8 1516 aa30.33■■■□□ 2.45
NELFA-205ENST00000416258 DNAJC5BQ9UF47 199 aa30.33■■■□□ 2.45
NELFA-205ENST00000416258 LAMC3Q9Y6N6 1575 aa30.29■■■□□ 2.44
NELFA-205ENST00000416258 NESP48681 1621 aa30.28■■■□□ 2.44
NELFA-205ENST00000416258 FANCD2Q9BXW9 1451 aa30.26■■■□□ 2.43
NELFA-205ENST00000416258 CSRNP3Q8WYN3 585 aa30.24■■■□□ 2.43
NELFA-205ENST00000416258 EHMT2Q96KQ7 1210 aa30.21■■■□□ 2.43
NELFA-205ENST00000416258 CEP164Q9UPV0 1460 aa30.04■■■□□ 2.4
NELFA-205ENST00000416258 PDS5BQ9NTI5 1447 aa30.04■■■□□ 2.4
NELFA-205ENST00000416258 DNMBPQ6XZF7 1577 aa30.02■■■□□ 2.4
NELFA-205ENST00000416258 KIF21BO75037 1637 aa30.02■■■□□ 2.4
NELFA-205ENST00000416258 GOLGA3Q08378 1498 aa30■■■□□ 2.39
NELFA-205ENST00000416258 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
NELFA-205ENST00000416258 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
NELFA-205ENST00000416258 TNIKQ9UKE5 1360 aa29.96■■■□□ 2.39
NELFA-205ENST00000416258 KIF27Q86VH2 1401 aa29.95■■■□□ 2.39
NELFA-205ENST00000416258 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
NELFA-205ENST00000416258 URB2Q14146 1524 aaKnown RBP29.89■■■□□ 2.37
NELFA-205ENST00000416258 UBTFP17480 764 aaKnown RBP29.86■■■□□ 2.37
NELFA-205ENST00000416258 CUX2O14529 1486 aa29.84■■■□□ 2.37
NELFA-205ENST00000416258 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
NELFA-205ENST00000416258 PRXQ9BXM0 1461 aa29.82■■■□□ 2.36
NELFA-205ENST00000416258 RAPGEF2Q9Y4G8 1499 aa29.82■■■□□ 2.36
NELFA-205ENST00000416258 CEP162Q5TB80 1403 aa29.81■■■□□ 2.36
NELFA-205ENST00000416258 ERICH3Q5RHP9 1530 aa29.78■■■□□ 2.36
NELFA-205ENST00000416258 ABCA10Q8WWZ4 1543 aa29.74■■■□□ 2.35
NELFA-205ENST00000416258 RAD54L2Q9Y4B4 1467 aa29.74■■■□□ 2.35
NELFA-205ENST00000416258 IGF1RP08069 1367 aa29.69■■■□□ 2.34
NELFA-205ENST00000416258 MRC2Q9UBG0 1479 aa29.65■■■□□ 2.34
NELFA-205ENST00000416258 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
NELFA-205ENST00000416258 CARMIL1Q5VZK9 1371 aa29.53■■■□□ 2.32
NELFA-205ENST00000416258 CLIP1P30622 1438 aa29.53■■■□□ 2.32
NELFA-205ENST00000416258 TARBP1Q13395 1621 aaKnown RBP29.51■■■□□ 2.31
NELFA-205ENST00000416258 WDR62O43379 1518 aa29.49■■■□□ 2.31
NELFA-205ENST00000416258 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
NELFA-205ENST00000416258 PCGF6Q9BYE7 350 aa29.48■■■□□ 2.31
NELFA-205ENST00000416258 ERCC6Q03468 1493 aa29.46■■■□□ 2.31
NELFA-205ENST00000416258 TRIM26Q12899 539 aaPredicted RBP29.43■■■□□ 2.3
NELFA-205ENST00000416258 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
NELFA-205ENST00000416258 CUL7Q14999 1698 aa29.43■■■□□ 2.3
NELFA-205ENST00000416258 GAPVD1Q14C86 1478 aa29.41■■■□□ 2.3
NELFA-205ENST00000416258 THOC2Q8NI27 1593 aaKnown RBP29.37■■■□□ 2.29
NELFA-205ENST00000416258 IFT140Q96RY7 1462 aa29.32■■■□□ 2.28
NELFA-205ENST00000416258 RANGAP1P46060 587 aaPredicted RBP29.31■■■□□ 2.28
NELFA-205ENST00000416258 VPS8Q8N3P4 1428 aa29.3■■■□□ 2.28
NELFA-205ENST00000416258 PPARGC1BQ86YN6 1023 aaKnown RBP29.24■■■□□ 2.27
NELFA-205ENST00000416258 PBRM1Q86U86 1689 aa29.24■■■□□ 2.27
NELFA-205ENST00000416258 ARAP1Q96P48 1450 aa29.23■■■□□ 2.27
NELFA-205ENST00000416258 AQRO60306 1485 aaKnown RBP eCLIP29.22■■■□□ 2.272e-7■■■□□ 16.5
NELFA-205ENST00000416258 ARHGAP35Q9NRY4 1499 aa29.19■■■□□ 2.26
NELFA-205ENST00000416258 ZNF608Q9ULD9 1512 aaPredicted RBP29.17■■■□□ 2.26
NELFA-205ENST00000416258 GRIN2BQ13224 1484 aa29.15■■■□□ 2.26
NELFA-205ENST00000416258 CTTNBP2Q8WZ74 1663 aa29.13■■■□□ 2.25
NELFA-205ENST00000416258 FHAD1B1AJZ9 1412 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms