RNA–Protein interactions for RNA: ENST00000416114.3

NGEF-205, Transcript of neuronal guanine nucleotide exchange factor, humanhuman

TSL 3

Gene NGEF, Length 667 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGEF-205ENST00000416114 NISCHQ9Y2I1 1504 aa28.83■■■□□ 2.21
NGEF-205ENST00000416114 ABCC9O60706 1549 aa26.24■■□□□ 1.79
NGEF-205ENST00000416114 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
NGEF-205ENST00000416114 DCAF8L2P0C7V8 631 aa24.81■■□□□ 1.56
NGEF-205ENST00000416114 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
NGEF-205ENST00000416114 DNAJC5BQ9UF47 199 aa24.73■■□□□ 1.55
NGEF-205ENST00000416114 NACADO15069 1562 aa24.51■■□□□ 1.51
NGEF-205ENST00000416114 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
NGEF-205ENST00000416114 UNC13AQ9UPW8 1703 aa24.12■■□□□ 1.45
NGEF-205ENST00000416114 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
NGEF-205ENST00000416114 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
NGEF-205ENST00000416114 ZCCHC6Q5VYS8 1495 aaKnown RBP23.82■■□□□ 1.4
NGEF-205ENST00000416114 SCRIBQ14160 1630 aa23.72■■□□□ 1.39
NGEF-205ENST00000416114 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
NGEF-205ENST00000416114 CECR2Q9BXF3 1484 aa23.6■■□□□ 1.37
NGEF-205ENST00000416114 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.36
NGEF-205ENST00000416114 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
NGEF-205ENST00000416114 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
NGEF-205ENST00000416114 DNAJC5Q9H3Z4 198 aa22.79■■□□□ 1.24
NGEF-205ENST00000416114 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
NGEF-205ENST00000416114 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
NGEF-205ENST00000416114 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
NGEF-205ENST00000416114 CUX2O14529 1486 aa22.53■■□□□ 1.2
NGEF-205ENST00000416114 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
NGEF-205ENST00000416114 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
NGEF-205ENST00000416114 NESP48681 1621 aa22.46■■□□□ 1.19
NGEF-205ENST00000416114 BAZ1BQ9UIG0 1483 aaKnown RBP22.42■■□□□ 1.18
NGEF-205ENST00000416114 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
NGEF-205ENST00000416114 BAZ1AQ9NRL2 1556 aaPredicted RBP22.38■■□□□ 1.17
NGEF-205ENST00000416114 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
NGEF-205ENST00000416114 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
NGEF-205ENST00000416114 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
NGEF-205ENST00000416114 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
NGEF-205ENST00000416114 THOC2Q8NI27 1593 aaKnown RBP22.11■■□□□ 1.13
NGEF-205ENST00000416114 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
NGEF-205ENST00000416114 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
NGEF-205ENST00000416114 WIZO95785 1651 aa21.99■■□□□ 1.11
NGEF-205ENST00000416114 TRIM41Q8WV44 630 aa21.96■■□□□ 1.11
NGEF-205ENST00000416114 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
NGEF-205ENST00000416114 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
NGEF-205ENST00000416114 WDR62O43379 1518 aa21.8■■□□□ 1.08
NGEF-205ENST00000416114 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
NGEF-205ENST00000416114 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
NGEF-205ENST00000416114 CFTRP13569 1480 aa21.69■■□□□ 1.06
NGEF-205ENST00000416114 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
NGEF-205ENST00000416114 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
NGEF-205ENST00000416114 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
NGEF-205ENST00000416114 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
NGEF-205ENST00000416114 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.02
NGEF-205ENST00000416114 IFT140Q96RY7 1462 aa21.37■■□□□ 1.01
NGEF-205ENST00000416114 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
NGEF-205ENST00000416114 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
NGEF-205ENST00000416114 FBLN2P98095 1184 aa21.31■■□□□ 1
NGEF-205ENST00000416114 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
NGEF-205ENST00000416114 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
NGEF-205ENST00000416114 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
NGEF-205ENST00000416114 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
NGEF-205ENST00000416114 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
NGEF-205ENST00000416114 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.993e-6■□□□□ 8.3
NGEF-205ENST00000416114 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
NGEF-205ENST00000416114 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
NGEF-205ENST00000416114 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
NGEF-205ENST00000416114 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
NGEF-205ENST00000416114 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
NGEF-205ENST00000416114 RAD54L2Q9Y4B4 1467 aa21.11■□□□□ 0.97
NGEF-205ENST00000416114 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
NGEF-205ENST00000416114 SOGA1O94964 1423 aa21.09■□□□□ 0.97
NGEF-205ENST00000416114 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
NGEF-205ENST00000416114 CHD1O14646 1710 aa21.07■□□□□ 0.96
NGEF-205ENST00000416114 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
NGEF-205ENST00000416114 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
NGEF-205ENST00000416114 SNAPC4Q5SXM2 1469 aa20.97■□□□□ 0.95
NGEF-205ENST00000416114 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
NGEF-205ENST00000416114 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
NGEF-205ENST00000416114 CUX1P39880 1505 aa20.9■□□□□ 0.94
NGEF-205ENST00000416114 GRIN2BQ13224 1484 aa20.86■□□□□ 0.93
NGEF-205ENST00000416114 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
NGEF-205ENST00000416114 MAGI1Q96QZ7 1491 aaPredicted RBP20.82■□□□□ 0.92
NGEF-205ENST00000416114 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
NGEF-205ENST00000416114 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
NGEF-205ENST00000416114 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
NGEF-205ENST00000416114 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
NGEF-205ENST00000416114 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
NGEF-205ENST00000416114 ABCA10Q8WWZ4 1543 aa20.67■□□□□ 0.9
NGEF-205ENST00000416114 WRNQ14191 1432 aaPredicted RBP eCLIP20.64■□□□□ 0.89
NGEF-205ENST00000416114 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
NGEF-205ENST00000416114 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
NGEF-205ENST00000416114 GRIN2AQ12879 1464 aa20.58■□□□□ 0.89
NGEF-205ENST00000416114 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
NGEF-205ENST00000416114 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
NGEF-205ENST00000416114 ADAMTS12P58397 1594 aa20.5■□□□□ 0.87
NGEF-205ENST00000416114 CEP170Q5SW79 1584 aa20.5■□□□□ 0.87
NGEF-205ENST00000416114 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
NGEF-205ENST00000416114 NUP160Q12769 1436 aa20.46■□□□□ 0.87
NGEF-205ENST00000416114 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.87
NGEF-205ENST00000416114 JPH4Q96JJ6 628 aa20.42■□□□□ 0.86
NGEF-205ENST00000416114 PRG4Q92954 1404 aaPredicted RBP20.41■□□□□ 0.86
NGEF-205ENST00000416114 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
NGEF-205ENST00000416114 NPM1P06748 294 aaKnown RBP eCLIP20.36■□□□□ 0.85
NGEF-205ENST00000416114 SHROOM2Q13796 1616 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms