RNA–Protein interactions for RNA: ENST00000415756.1

AP1B1-206, Transcript of adaptor related protein complex 1 subunit beta 1, humanhuman

TSL 3

Gene AP1B1, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1B1-206ENST00000415756 NISCHQ9Y2I1 1504 aa33.99■■■■□ 3.03
AP1B1-206ENST00000415756 ABCC9O60706 1549 aa30.65■■■□□ 2.5
AP1B1-206ENST00000415756 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
AP1B1-206ENST00000415756 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
AP1B1-206ENST00000415756 NACADO15069 1562 aa28.96■■■□□ 2.23
AP1B1-206ENST00000415756 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
AP1B1-206ENST00000415756 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
AP1B1-206ENST00000415756 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
AP1B1-206ENST00000415756 UNC13AQ9UPW8 1703 aa28.51■■■□□ 2.15
AP1B1-206ENST00000415756 PABPN1Q86U42 306 aaKnown RBP eCLIP28.48■■■□□ 2.15
AP1B1-206ENST00000415756 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
AP1B1-206ENST00000415756 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.09
AP1B1-206ENST00000415756 DCAF1Q9Y4B6 1507 aa28.11■■■□□ 2.09
AP1B1-206ENST00000415756 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
AP1B1-206ENST00000415756 SCRIBQ14160 1630 aa27.83■■■□□ 2.05
AP1B1-206ENST00000415756 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.03
AP1B1-206ENST00000415756 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.02
AP1B1-206ENST00000415756 EIF4G1Q04637 1599 aaKnown RBP27.63■■■□□ 2.01
AP1B1-206ENST00000415756 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
AP1B1-206ENST00000415756 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
AP1B1-206ENST00000415756 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
AP1B1-206ENST00000415756 SMARCA2P51531 1590 aa26.56■■□□□ 1.84
AP1B1-206ENST00000415756 SMARCA4P51532 1647 aa26.56■■□□□ 1.84
AP1B1-206ENST00000415756 ERCC6Q03468 1493 aa26.52■■□□□ 1.84
AP1B1-206ENST00000415756 HMGXB3Q12766 1538 aa26.52■■□□□ 1.84
AP1B1-206ENST00000415756 CUX2O14529 1486 aa26.51■■□□□ 1.83
AP1B1-206ENST00000415756 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
AP1B1-206ENST00000415756 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
AP1B1-206ENST00000415756 PEG3Q9GZU2 1588 aa26.31■■□□□ 1.8
AP1B1-206ENST00000415756 NESP48681 1621 aa26.28■■□□□ 1.8
AP1B1-206ENST00000415756 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
AP1B1-206ENST00000415756 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
AP1B1-206ENST00000415756 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
AP1B1-206ENST00000415756 PDS5BQ9NTI5 1447 aa26■■□□□ 1.75
AP1B1-206ENST00000415756 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
AP1B1-206ENST00000415756 CADPSQ9ULU8 1353 aa25.88■■□□□ 1.73
AP1B1-206ENST00000415756 WIZO95785 1651 aa25.87■■□□□ 1.73
AP1B1-206ENST00000415756 MRC2Q9UBG0 1479 aa25.77■■□□□ 1.72
AP1B1-206ENST00000415756 WDR62O43379 1518 aa25.71■■□□□ 1.71
AP1B1-206ENST00000415756 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
AP1B1-206ENST00000415756 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
AP1B1-206ENST00000415756 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
AP1B1-206ENST00000415756 CFTRP13569 1480 aa25.56■■□□□ 1.68
AP1B1-206ENST00000415756 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
AP1B1-206ENST00000415756 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
AP1B1-206ENST00000415756 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
AP1B1-206ENST00000415756 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
AP1B1-206ENST00000415756 OSCARQ8IYS5 282 aa25.28■■□□□ 1.64
AP1B1-206ENST00000415756 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
AP1B1-206ENST00000415756 IFT140Q96RY7 1462 aa25.14■■□□□ 1.61
AP1B1-206ENST00000415756 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
AP1B1-206ENST00000415756 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
AP1B1-206ENST00000415756 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
AP1B1-206ENST00000415756 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
AP1B1-206ENST00000415756 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
AP1B1-206ENST00000415756 RIMBP3CA6NJZ7 1639 aa24.95■■□□□ 1.58
AP1B1-206ENST00000415756 RIMBP3BA6NNM3 1639 aa24.95■■□□□ 1.58
AP1B1-206ENST00000415756 RIMBP3Q9UFD9 1639 aa24.95■■□□□ 1.58
AP1B1-206ENST00000415756 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
AP1B1-206ENST00000415756 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
AP1B1-206ENST00000415756 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.56
AP1B1-206ENST00000415756 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
AP1B1-206ENST00000415756 CHD1O14646 1710 aa24.81■■□□□ 1.56
AP1B1-206ENST00000415756 SOGA1O94964 1423 aa24.71■■□□□ 1.55
AP1B1-206ENST00000415756 FBLN2P98095 1184 aa24.71■■□□□ 1.55
AP1B1-206ENST00000415756 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.55
AP1B1-206ENST00000415756 WDR97A6NE52 1622 aa24.69■■□□□ 1.54
AP1B1-206ENST00000415756 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
AP1B1-206ENST00000415756 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
AP1B1-206ENST00000415756 FGD5Q6ZNL6 1462 aa24.65■■□□□ 1.54
AP1B1-206ENST00000415756 CUX1P39880 1505 aa24.59■■□□□ 1.53
AP1B1-206ENST00000415756 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.53
AP1B1-206ENST00000415756 ARAP1Q96P48 1450 aa24.58■■□□□ 1.52
AP1B1-206ENST00000415756 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
AP1B1-206ENST00000415756 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
AP1B1-206ENST00000415756 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
AP1B1-206ENST00000415756 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
AP1B1-206ENST00000415756 CLASP1Q7Z460 1538 aa24.5■■□□□ 1.51
AP1B1-206ENST00000415756 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
AP1B1-206ENST00000415756 TRHP20396 242 aaPredicted RBP24.46■■□□□ 1.51
AP1B1-206ENST00000415756 PBRM1Q86U86 1689 aa24.45■■□□□ 1.5
AP1B1-206ENST00000415756 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
AP1B1-206ENST00000415756 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
AP1B1-206ENST00000415756 SUPT5HO00267 1087 aaKnown RBP24.36■■□□□ 1.49
AP1B1-206ENST00000415756 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
AP1B1-206ENST00000415756 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
AP1B1-206ENST00000415756 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
AP1B1-206ENST00000415756 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
AP1B1-206ENST00000415756 GRIN2AQ12879 1464 aa24.2■■□□□ 1.47
AP1B1-206ENST00000415756 ADAMTS12P58397 1594 aa24.18■■□□□ 1.46
AP1B1-206ENST00000415756 FHAD1B1AJZ9 1412 aa24.11■■□□□ 1.45
AP1B1-206ENST00000415756 NUP160Q12769 1436 aa24.11■■□□□ 1.45
AP1B1-206ENST00000415756 CEP170Q5SW79 1584 aa24.11■■□□□ 1.45
AP1B1-206ENST00000415756 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
AP1B1-206ENST00000415756 ERCC6L2Q5T890 1561 aa24.06■■□□□ 1.44
AP1B1-206ENST00000415756 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
AP1B1-206ENST00000415756 PRG4Q92954 1404 aaPredicted RBP23.9■■□□□ 1.42
AP1B1-206ENST00000415756 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
AP1B1-206ENST00000415756 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
AP1B1-206ENST00000415756 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms