RNA–Protein interactions for RNA: ENST00000414893.5

CAP1-208, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 3

Gene CAP1, Length 528 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-208ENST00000414893 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
CAP1-208ENST00000414893 ABCC9O60706 1549 aa30.93■■■□□ 2.54
CAP1-208ENST00000414893 CCDC180Q9P1Z9 1646 aa30.74■■■□□ 2.51
CAP1-208ENST00000414893 RB1CC1Q8TDY2 1594 aa29.35■■■□□ 2.29
CAP1-208ENST00000414893 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
CAP1-208ENST00000414893 NACADO15069 1562 aa29.12■■■□□ 2.25
CAP1-208ENST00000414893 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
CAP1-208ENST00000414893 PABPN1Q86U42 306 aaKnown RBP eCLIP28.84■■■□□ 2.21
CAP1-208ENST00000414893 MYO15BQ96JP2 1530 aa28.65■■■□□ 2.18
CAP1-208ENST00000414893 UNC13AQ9UPW8 1703 aa28.65■■■□□ 2.18
CAP1-208ENST00000414893 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
CAP1-208ENST00000414893 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
CAP1-208ENST00000414893 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
CAP1-208ENST00000414893 SCRIBQ14160 1630 aa28.09■■■□□ 2.09
CAP1-208ENST00000414893 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
CAP1-208ENST00000414893 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
CAP1-208ENST00000414893 CECR2Q9BXF3 1484 aa27.86■■■□□ 2.05
CAP1-208ENST00000414893 EIF4G1Q04637 1599 aaKnown RBP27.81■■■□□ 2.04
CAP1-208ENST00000414893 NCAPD3P42695 1498 aa26.89■■□□□ 1.9
CAP1-208ENST00000414893 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
CAP1-208ENST00000414893 DNAJC5Q9H3Z4 198 aa26.78■■□□□ 1.88
CAP1-208ENST00000414893 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
CAP1-208ENST00000414893 SMARCA2P51531 1590 aa26.73■■□□□ 1.87
CAP1-208ENST00000414893 ERCC6Q03468 1493 aa26.73■■□□□ 1.87
CAP1-208ENST00000414893 HMGXB3Q12766 1538 aa26.66■■□□□ 1.86
CAP1-208ENST00000414893 CUX2O14529 1486 aa26.64■■□□□ 1.86
CAP1-208ENST00000414893 BAZ1AQ9NRL2 1556 aaPredicted RBP26.61■■□□□ 1.85
CAP1-208ENST00000414893 BAZ1BQ9UIG0 1483 aaKnown RBP26.57■■□□□ 1.84
CAP1-208ENST00000414893 NESP48681 1621 aa26.53■■□□□ 1.84
CAP1-208ENST00000414893 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
CAP1-208ENST00000414893 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
CAP1-208ENST00000414893 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
CAP1-208ENST00000414893 THOC2Q8NI27 1593 aaKnown RBP26.22■■□□□ 1.79
CAP1-208ENST00000414893 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
CAP1-208ENST00000414893 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
CAP1-208ENST00000414893 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
CAP1-208ENST00000414893 WIZO95785 1651 aa26.1■■□□□ 1.77
CAP1-208ENST00000414893 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
CAP1-208ENST00000414893 WDR62O43379 1518 aa25.85■■□□□ 1.73
CAP1-208ENST00000414893 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
CAP1-208ENST00000414893 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
CAP1-208ENST00000414893 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
CAP1-208ENST00000414893 CFTRP13569 1480 aa25.76■■□□□ 1.71
CAP1-208ENST00000414893 TOP2AP11388 1531 aaKnown RBP25.75■■□□□ 1.71
CAP1-208ENST00000414893 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
CAP1-208ENST00000414893 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
CAP1-208ENST00000414893 CCDC88BA6NC98 1476 aa25.5■■□□□ 1.67
CAP1-208ENST00000414893 OSCARQ8IYS5 282 aa25.5■■□□□ 1.67
CAP1-208ENST00000414893 PRDM2Q13029 1718 aa25.45■■□□□ 1.66
CAP1-208ENST00000414893 IFT140Q96RY7 1462 aa25.32■■□□□ 1.64
CAP1-208ENST00000414893 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
CAP1-208ENST00000414893 ZNF608Q9ULD9 1512 aaPredicted RBP25.3■■□□□ 1.64
CAP1-208ENST00000414893 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
CAP1-208ENST00000414893 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
CAP1-208ENST00000414893 EIF4G3O43432 1585 aaKnown RBP25.12■■□□□ 1.61
CAP1-208ENST00000414893 RIMBP3CA6NJZ7 1639 aa25.1■■□□□ 1.61
CAP1-208ENST00000414893 RIMBP3BA6NNM3 1639 aa25.1■■□□□ 1.61
CAP1-208ENST00000414893 RIMBP3Q9UFD9 1639 aa25.1■■□□□ 1.61
CAP1-208ENST00000414893 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.611e-6■■■■□ 21.4
CAP1-208ENST00000414893 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
CAP1-208ENST00000414893 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
CAP1-208ENST00000414893 FBLN2P98095 1184 aa25.02■■□□□ 1.6
CAP1-208ENST00000414893 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
CAP1-208ENST00000414893 RAD54L2Q9Y4B4 1467 aa24.97■■□□□ 1.59
CAP1-208ENST00000414893 SOGA1O94964 1423 aa24.96■■□□□ 1.59
CAP1-208ENST00000414893 CHD1O14646 1710 aa24.95■■□□□ 1.59
CAP1-208ENST00000414893 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
CAP1-208ENST00000414893 CYB5RLQ6IPT4 315 aa24.93■■□□□ 1.58
CAP1-208ENST00000414893 FGD5Q6ZNL6 1462 aa24.88■■□□□ 1.57
CAP1-208ENST00000414893 CUX1P39880 1505 aa24.83■■□□□ 1.57
CAP1-208ENST00000414893 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
CAP1-208ENST00000414893 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
CAP1-208ENST00000414893 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
CAP1-208ENST00000414893 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
CAP1-208ENST00000414893 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
CAP1-208ENST00000414893 GRIN2BQ13224 1484 aa24.72■■□□□ 1.55
CAP1-208ENST00000414893 TRHP20396 242 aaPredicted RBP24.72■■□□□ 1.55
CAP1-208ENST00000414893 MAGI1Q96QZ7 1491 aaPredicted RBP24.71■■□□□ 1.55
CAP1-208ENST00000414893 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
CAP1-208ENST00000414893 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
CAP1-208ENST00000414893 SYNJ2O15056 1496 aa24.64■■□□□ 1.54
CAP1-208ENST00000414893 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.53
CAP1-208ENST00000414893 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
CAP1-208ENST00000414893 ABCA10Q8WWZ4 1543 aa24.57■■□□□ 1.52
CAP1-208ENST00000414893 ABCA5Q8WWZ7 1642 aa24.51■■□□□ 1.51
CAP1-208ENST00000414893 WRNQ14191 1432 aaPredicted RBP eCLIP24.5■■□□□ 1.512e-8■■■□□ 16.7
CAP1-208ENST00000414893 GRIN2AQ12879 1464 aa24.39■■□□□ 1.5
CAP1-208ENST00000414893 TOP2BQ02880 1626 aa24.39■■□□□ 1.49
CAP1-208ENST00000414893 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
CAP1-208ENST00000414893 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
CAP1-208ENST00000414893 FHAD1B1AJZ9 1412 aa24.31■■□□□ 1.48
CAP1-208ENST00000414893 CEP170Q5SW79 1584 aa24.3■■□□□ 1.48
CAP1-208ENST00000414893 NUP160Q12769 1436 aa24.3■■□□□ 1.48
CAP1-208ENST00000414893 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
CAP1-208ENST00000414893 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
CAP1-208ENST00000414893 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
CAP1-208ENST00000414893 JPH4Q96JJ6 628 aa24.14■■□□□ 1.45
CAP1-208ENST00000414893 PRG4Q92954 1404 aaPredicted RBP24.13■■□□□ 1.45
CAP1-208ENST00000414893 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
CAP1-208ENST00000414893 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms