RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 NISCHQ9Y2I1 1504 aa54.12■■■■■ 6.25
RHBDD3-204ENST00000414672 ABCC9O60706 1549 aa49.05■■■■■ 5.44
RHBDD3-204ENST00000414672 CCDC180Q9P1Z9 1646 aa48.58■■■■■ 5.37
RHBDD3-204ENST00000414672 RB1CC1Q8TDY2 1594 aa46.48■■■■■ 5.03
RHBDD3-204ENST00000414672 DNAJC5BQ9UF47 199 aa46.27■■■■■ 5
RHBDD3-204ENST00000414672 DCAF8L2P0C7V8 631 aa46.09■■■■■ 4.97
RHBDD3-204ENST00000414672 NACADO15069 1562 aa46.07■■■■■ 4.97
RHBDD3-204ENST00000414672 PABPN1Q86U42 306 aaKnown RBP eCLIP45.71■■■■■ 4.91
RHBDD3-204ENST00000414672 UNC13AQ9UPW8 1703 aa45.29■■■■■ 4.84
RHBDD3-204ENST00000414672 MYO15BQ96JP2 1530 aa45.29■■■■■ 4.84
RHBDD3-204ENST00000414672 BICRAQ9NZM4 1560 aa45.07■■■■■ 4.81
RHBDD3-204ENST00000414672 ZCCHC6Q5VYS8 1495 aaKnown RBP44.75■■■■■ 4.75
RHBDD3-204ENST00000414672 DCAF1Q9Y4B6 1507 aa44.61■■■■■ 4.73
RHBDD3-204ENST00000414672 SHROOM4Q9ULL8 1493 aa44.44■■■■■ 4.7
RHBDD3-204ENST00000414672 SCRIBQ14160 1630 aa44.37■■■■■ 4.69
RHBDD3-204ENST00000414672 CC2D2AQ9P2K1 1620 aa44.21■■■■■ 4.67
RHBDD3-204ENST00000414672 CECR2Q9BXF3 1484 aa44.2■■■■■ 4.67
RHBDD3-204ENST00000414672 EIF4G1Q04637 1599 aaKnown RBP44.04■■■■■ 4.64
RHBDD3-204ENST00000414672 DNAJC5Q9H3Z4 198 aa42.71■■■■■ 4.43
RHBDD3-204ENST00000414672 NCAPD3P42695 1498 aa42.56■■■■■ 4.4
RHBDD3-204ENST00000414672 ERCC6Q03468 1493 aa42.41■■■■■ 4.38
RHBDD3-204ENST00000414672 ATAD2BQ9ULI0 1458 aa42.41■■■■■ 4.38
RHBDD3-204ENST00000414672 CUX2O14529 1486 aa42.32■■■■■ 4.37
RHBDD3-204ENST00000414672 SMARCA2P51531 1590 aa42.27■■■■■ 4.36
RHBDD3-204ENST00000414672 SMARCA4P51532 1647 aa42.24■■■■■ 4.35
RHBDD3-204ENST00000414672 HMGXB3Q12766 1538 aa42.17■■■■■ 4.34
RHBDD3-204ENST00000414672 BAZ1AQ9NRL2 1556 aaPredicted RBP42.03■■■■■ 4.32
RHBDD3-204ENST00000414672 NESP48681 1621 aa42.02■■■■■ 4.32
RHBDD3-204ENST00000414672 BAZ1BQ9UIG0 1483 aaKnown RBP42.02■■■■■ 4.32
RHBDD3-204ENST00000414672 PEG3Q9GZU2 1588 aa41.79■■■■■ 4.28
RHBDD3-204ENST00000414672 MROH2BQ7Z745 1585 aa41.71■■■■■ 4.27
RHBDD3-204ENST00000414672 LAMC3Q9Y6N6 1575 aa41.62■■■■■ 4.25
RHBDD3-204ENST00000414672 THOC2Q8NI27 1593 aaKnown RBP41.54■■■■■ 4.24
RHBDD3-204ENST00000414672 PDS5BQ9NTI5 1447 aa41.49■■■■■ 4.23
RHBDD3-204ENST00000414672 KIF21AQ7Z4S6 1674 aa41.38■■■■■ 4.21
RHBDD3-204ENST00000414672 CADPSQ9ULU8 1353 aa41.31■■■■■ 4.2
RHBDD3-204ENST00000414672 WIZO95785 1651 aa41.17■■■■■ 4.18
RHBDD3-204ENST00000414672 MRC2Q9UBG0 1479 aa41.1■■■■■ 4.17
RHBDD3-204ENST00000414672 WDR62O43379 1518 aa40.95■■■■■ 4.15
RHBDD3-204ENST00000414672 CEP164Q9UPV0 1460 aa40.9■■■■■ 4.14
RHBDD3-204ENST00000414672 TRIM41Q8WV44 630 aa40.84■■■■■ 4.13
RHBDD3-204ENST00000414672 FANCD2Q9BXW9 1451 aa40.83■■■■■ 4.13
RHBDD3-204ENST00000414672 RSF1Q96T23 1441 aaPredicted RBP40.77■■■■■ 4.12
RHBDD3-204ENST00000414672 CFTRP13569 1480 aa40.73■■■■■ 4.11
RHBDD3-204ENST00000414672 TOP2AP11388 1531 aaKnown RBP40.63■■■■■ 4.1
RHBDD3-204ENST00000414672 OSCARQ8IYS5 282 aa40.49■■■■■ 4.07
RHBDD3-204ENST00000414672 URB2Q14146 1524 aaKnown RBP40.48■■■■■ 4.07
RHBDD3-204ENST00000414672 CCDC88BA6NC98 1476 aa40.23■■■■■ 4.03
RHBDD3-204ENST00000414672 PRDM2Q13029 1718 aa40.15■■■■■ 4.02
RHBDD3-204ENST00000414672 IFT140Q96RY7 1462 aa40.09■■■■■ 4.01
RHBDD3-204ENST00000414672 ZNF608Q9ULD9 1512 aaPredicted RBP40.06■■■■■ 4
RHBDD3-204ENST00000414672 TOPBP1Q92547 1522 aa40■■■■□ 3.99
RHBDD3-204ENST00000414672 ABCC8Q09428 1581 aa39.91■■■■□ 3.98
RHBDD3-204ENST00000414672 RIMBP3CA6NJZ7 1639 aa39.83■■■■□ 3.97
RHBDD3-204ENST00000414672 RIMBP3BA6NNM3 1639 aa39.83■■■■□ 3.97
RHBDD3-204ENST00000414672 RIMBP3Q9UFD9 1639 aa39.83■■■■□ 3.97
RHBDD3-204ENST00000414672 DNMBPQ6XZF7 1577 aa39.8■■■■□ 3.96
RHBDD3-204ENST00000414672 EIF4G3O43432 1585 aaKnown RBP39.76■■■■□ 3.95
RHBDD3-204ENST00000414672 ARHGEF11O15085 1522 aa39.71■■■■□ 3.95
RHBDD3-204ENST00000414672 AQRO60306 1485 aaKnown RBP eCLIP39.7■■■■□ 3.951e-7■■■■■ 37.9
RHBDD3-204ENST00000414672 FBLN2P98095 1184 aa39.64■■■■□ 3.94
RHBDD3-204ENST00000414672 TARBP1Q13395 1621 aaKnown RBP39.61■■■■□ 3.93
RHBDD3-204ENST00000414672 CYB5RLQ6IPT4 315 aa39.59■■■■□ 3.93
RHBDD3-204ENST00000414672 POLA1P09884 1462 aaPredicted RBP39.57■■■■□ 3.93
RHBDD3-204ENST00000414672 CHD1O14646 1710 aa39.49■■■■□ 3.91
RHBDD3-204ENST00000414672 RAD54L2Q9Y4B4 1467 aa39.49■■■■□ 3.91
RHBDD3-204ENST00000414672 SOGA1O94964 1423 aa39.47■■■■□ 3.91
RHBDD3-204ENST00000414672 TDRD9Q8NDG6 1382 aaKnown RBP39.45■■■■□ 3.91
RHBDD3-204ENST00000414672 FGD5Q6ZNL6 1462 aa39.3■■■■□ 3.88
RHBDD3-204ENST00000414672 TRHP20396 242 aaPredicted RBP39.3■■■■□ 3.88
RHBDD3-204ENST00000414672 ARAP1Q96P48 1450 aa39.3■■■■□ 3.88
RHBDD3-204ENST00000414672 CHMP7Q8WUX9 453 aaPredicted RBP39.26■■■■□ 3.88
RHBDD3-204ENST00000414672 SNAPC4Q5SXM2 1469 aa39.25■■■■□ 3.87
RHBDD3-204ENST00000414672 CUX1P39880 1505 aa39.19■■■■□ 3.86
RHBDD3-204ENST00000414672 WDR97A6NE52 1622 aa39.15■■■■□ 3.86
RHBDD3-204ENST00000414672 GRIN2BQ13224 1484 aa39.11■■■■□ 3.85
RHBDD3-204ENST00000414672 MAGI1Q96QZ7 1491 aaPredicted RBP39.11■■■■□ 3.85
RHBDD3-204ENST00000414672 SYNJ1O43426 1573 aa39.05■■■■□ 3.84
RHBDD3-204ENST00000414672 CLASP1Q7Z460 1538 aa39.04■■■■□ 3.84
RHBDD3-204ENST00000414672 SYNJ2O15056 1496 aa39■■■■□ 3.83
RHBDD3-204ENST00000414672 SUPT5HO00267 1087 aaKnown RBP38.95■■■■□ 3.83
RHBDD3-204ENST00000414672 GAPVD1Q14C86 1478 aa38.94■■■■□ 3.82
RHBDD3-204ENST00000414672 PBRM1Q86U86 1689 aa38.83■■■■□ 3.81
RHBDD3-204ENST00000414672 ABCA10Q8WWZ4 1543 aa38.81■■■■□ 3.8
RHBDD3-204ENST00000414672 ABCA5Q8WWZ7 1642 aa38.72■■■■□ 3.79
RHBDD3-204ENST00000414672 WRNQ14191 1432 aaPredicted RBP eCLIP38.68■■■■□ 3.78
RHBDD3-204ENST00000414672 GRIN2AQ12879 1464 aa38.59■■■■□ 3.77
RHBDD3-204ENST00000414672 ADAMTS12P58397 1594 aa38.48■■■■□ 3.75
RHBDD3-204ENST00000414672 TOP2BQ02880 1626 aa38.46■■■■□ 3.75
RHBDD3-204ENST00000414672 ERCC6L2Q5T890 1561 aa38.45■■■■□ 3.75
RHBDD3-204ENST00000414672 FHAD1B1AJZ9 1412 aa38.44■■■■□ 3.74
RHBDD3-204ENST00000414672 NUP160Q12769 1436 aa38.44■■■■□ 3.74
RHBDD3-204ENST00000414672 BIVM-ERCC5R4GMW8 1640 aa38.43■■■■□ 3.74
RHBDD3-204ENST00000414672 CEP170Q5SW79 1584 aa38.43■■■■□ 3.74
RHBDD3-204ENST00000414672 AEBP2Q6ZN18 517 aaPredicted RBP38.38■■■■□ 3.73
RHBDD3-204ENST00000414672 ERICH3Q5RHP9 1530 aa38.31■■■■□ 3.72
RHBDD3-204ENST00000414672 SHROOM2Q13796 1616 aa38.24■■■■□ 3.71
RHBDD3-204ENST00000414672 PRG4Q92954 1404 aaPredicted RBP38.19■■■■□ 3.7
RHBDD3-204ENST00000414672 JPH4Q96JJ6 628 aa38.17■■■■□ 3.7
RHBDD3-204ENST00000414672 NPM1P06748 294 aaKnown RBP eCLIP37.97■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms