RNA–Protein interactions for RNA: ENST00000414589.1

TRAF2-202, Transcript of TNF receptor associated factor 2, humanhuman

TSL 3

Gene TRAF2, Length 680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF2-202ENST00000414589 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
TRAF2-202ENST00000414589 CCDC180Q9P1Z9 1646 aa28.28■■■□□ 2.12
TRAF2-202ENST00000414589 ABCC9O60706 1549 aa27.74■■■□□ 2.03
TRAF2-202ENST00000414589 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.86
TRAF2-202ENST00000414589 NACADO15069 1562 aa26.6■■□□□ 1.85
TRAF2-202ENST00000414589 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
TRAF2-202ENST00000414589 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
TRAF2-202ENST00000414589 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
TRAF2-202ENST00000414589 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
TRAF2-202ENST00000414589 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
TRAF2-202ENST00000414589 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
TRAF2-202ENST00000414589 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
TRAF2-202ENST00000414589 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
TRAF2-202ENST00000414589 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
TRAF2-202ENST00000414589 DNAJC5BQ9UF47 199 aa25.57■■□□□ 1.68
TRAF2-202ENST00000414589 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
TRAF2-202ENST00000414589 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
TRAF2-202ENST00000414589 CECR2Q9BXF3 1484 aa24.94■■□□□ 1.58
TRAF2-202ENST00000414589 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
TRAF2-202ENST00000414589 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
TRAF2-202ENST00000414589 ATAD2BQ9ULI0 1458 aa24.58■■□□□ 1.52
TRAF2-202ENST00000414589 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
TRAF2-202ENST00000414589 SMARCA2P51531 1590 aa24.51■■□□□ 1.51
TRAF2-202ENST00000414589 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
TRAF2-202ENST00000414589 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
TRAF2-202ENST00000414589 HMGXB3Q12766 1538 aa24.44■■□□□ 1.5
TRAF2-202ENST00000414589 BAZ1BQ9UIG0 1483 aaKnown RBP24.34■■□□□ 1.49
TRAF2-202ENST00000414589 WIZO95785 1651 aa24.22■■□□□ 1.47
TRAF2-202ENST00000414589 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.46
TRAF2-202ENST00000414589 NESP48681 1621 aa24.01■■□□□ 1.43
TRAF2-202ENST00000414589 TOP2AP11388 1531 aaKnown RBP23.97■■□□□ 1.43
TRAF2-202ENST00000414589 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
TRAF2-202ENST00000414589 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
TRAF2-202ENST00000414589 CADPSQ9ULU8 1353 aa23.83■■□□□ 1.41
TRAF2-202ENST00000414589 PDS5BQ9NTI5 1447 aa23.74■■□□□ 1.39
TRAF2-202ENST00000414589 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.38
TRAF2-202ENST00000414589 CUX2O14529 1486 aa23.69■■□□□ 1.38
TRAF2-202ENST00000414589 CFTRP13569 1480 aa23.69■■□□□ 1.38
TRAF2-202ENST00000414589 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
TRAF2-202ENST00000414589 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
TRAF2-202ENST00000414589 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
TRAF2-202ENST00000414589 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
TRAF2-202ENST00000414589 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
TRAF2-202ENST00000414589 WDR62O43379 1518 aa23.48■■□□□ 1.35
TRAF2-202ENST00000414589 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
TRAF2-202ENST00000414589 SUPT5HO00267 1087 aaKnown RBP23.45■■□□□ 1.34
TRAF2-202ENST00000414589 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
TRAF2-202ENST00000414589 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
TRAF2-202ENST00000414589 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
TRAF2-202ENST00000414589 ABCC8Q09428 1581 aa23.14■■□□□ 1.29
TRAF2-202ENST00000414589 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
TRAF2-202ENST00000414589 DNAJC5Q9H3Z4 198 aa23.04■■□□□ 1.28
TRAF2-202ENST00000414589 CUX1P39880 1505 aa23.01■■□□□ 1.27
TRAF2-202ENST00000414589 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
TRAF2-202ENST00000414589 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
TRAF2-202ENST00000414589 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
TRAF2-202ENST00000414589 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
TRAF2-202ENST00000414589 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.25
TRAF2-202ENST00000414589 EIF4G3O43432 1585 aaKnown RBP22.87■■□□□ 1.25
TRAF2-202ENST00000414589 SOGA1O94964 1423 aa22.86■■□□□ 1.25
TRAF2-202ENST00000414589 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.242e-9■■■■■ 63.3
TRAF2-202ENST00000414589 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
TRAF2-202ENST00000414589 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
TRAF2-202ENST00000414589 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
TRAF2-202ENST00000414589 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
TRAF2-202ENST00000414589 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
TRAF2-202ENST00000414589 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
TRAF2-202ENST00000414589 ABCA10Q8WWZ4 1543 aa22.7■■□□□ 1.22
TRAF2-202ENST00000414589 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
TRAF2-202ENST00000414589 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
TRAF2-202ENST00000414589 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
TRAF2-202ENST00000414589 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
TRAF2-202ENST00000414589 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
TRAF2-202ENST00000414589 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
TRAF2-202ENST00000414589 CHD1O14646 1710 aa22.57■■□□□ 1.2
TRAF2-202ENST00000414589 PBRM1Q86U86 1689 aa22.56■■□□□ 1.2
TRAF2-202ENST00000414589 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
TRAF2-202ENST00000414589 FBLN2P98095 1184 aa22.48■■□□□ 1.19
TRAF2-202ENST00000414589 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
TRAF2-202ENST00000414589 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
TRAF2-202ENST00000414589 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
TRAF2-202ENST00000414589 CLASP1Q7Z460 1538 aa22.37■■□□□ 1.17
TRAF2-202ENST00000414589 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
TRAF2-202ENST00000414589 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
TRAF2-202ENST00000414589 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
TRAF2-202ENST00000414589 FHAD1B1AJZ9 1412 aa22.34■■□□□ 1.17
TRAF2-202ENST00000414589 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
TRAF2-202ENST00000414589 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
TRAF2-202ENST00000414589 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
TRAF2-202ENST00000414589 NUP160Q12769 1436 aa22.26■■□□□ 1.15
TRAF2-202ENST00000414589 IGF1RP08069 1367 aa22.25■■□□□ 1.15
TRAF2-202ENST00000414589 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
TRAF2-202ENST00000414589 TRIM41Q8WV44 630 aa22.22■■□□□ 1.15
TRAF2-202ENST00000414589 CUL7Q14999 1698 aa22.18■■□□□ 1.14
TRAF2-202ENST00000414589 ARAP1Q96P48 1450 aa22.18■■□□□ 1.14
TRAF2-202ENST00000414589 RUSC2Q8N2Y8 1516 aa22.13■■□□□ 1.13
TRAF2-202ENST00000414589 CARMIL1Q5VZK9 1371 aa22.1■■□□□ 1.13
TRAF2-202ENST00000414589 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
TRAF2-202ENST00000414589 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
TRAF2-202ENST00000414589 ERCC6L2Q5T890 1561 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms