RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 NISCHQ9Y2I1 1504 aa23.25■■□□□ 1.31
TRIM27-203ENST00000414543 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
TRIM27-203ENST00000414543 ZCCHC6Q5VYS8 1495 aaKnown RBP19.51■□□□□ 0.71
TRIM27-203ENST00000414543 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
TRIM27-203ENST00000414543 ABCC9O60706 1549 aa19.23■□□□□ 0.67
TRIM27-203ENST00000414543 DCAF1Q9Y4B6 1507 aa19.22■□□□□ 0.67
TRIM27-203ENST00000414543 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
TRIM27-203ENST00000414543 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
TRIM27-203ENST00000414543 NACADO15069 1562 aa18.91■□□□□ 0.62
TRIM27-203ENST00000414543 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
TRIM27-203ENST00000414543 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
TRIM27-203ENST00000414543 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
TRIM27-203ENST00000414543 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
TRIM27-203ENST00000414543 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
TRIM27-203ENST00000414543 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRIM27-203ENST00000414543 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
TRIM27-203ENST00000414543 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
TRIM27-203ENST00000414543 BAZ1AQ9NRL2 1556 aaPredicted RBP17.97■□□□□ 0.47
TRIM27-203ENST00000414543 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.47
TRIM27-203ENST00000414543 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
TRIM27-203ENST00000414543 WIZO95785 1651 aa17.82■□□□□ 0.44
TRIM27-203ENST00000414543 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
TRIM27-203ENST00000414543 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
TRIM27-203ENST00000414543 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
TRIM27-203ENST00000414543 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
TRIM27-203ENST00000414543 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
TRIM27-203ENST00000414543 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
TRIM27-203ENST00000414543 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
TRIM27-203ENST00000414543 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
TRIM27-203ENST00000414543 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
TRIM27-203ENST00000414543 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
TRIM27-203ENST00000414543 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
TRIM27-203ENST00000414543 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
TRIM27-203ENST00000414543 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
TRIM27-203ENST00000414543 CFTRP13569 1480 aa17.05■□□□□ 0.32
TRIM27-203ENST00000414543 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
TRIM27-203ENST00000414543 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
TRIM27-203ENST00000414543 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
TRIM27-203ENST00000414543 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.3
TRIM27-203ENST00000414543 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
TRIM27-203ENST00000414543 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
TRIM27-203ENST00000414543 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
TRIM27-203ENST00000414543 NESP48681 1621 aa16.86■□□□□ 0.29
TRIM27-203ENST00000414543 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
TRIM27-203ENST00000414543 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
TRIM27-203ENST00000414543 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
TRIM27-203ENST00000414543 CUX1P39880 1505 aa16.79■□□□□ 0.28
TRIM27-203ENST00000414543 LOC105371045A0A1W2PR82 267 aa16.78■□□□□ 0.28
TRIM27-203ENST00000414543 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
TRIM27-203ENST00000414543 SOGA1O94964 1423 aa16.75■□□□□ 0.27
TRIM27-203ENST00000414543 EEA1Q15075 1411 aa16.75■□□□□ 0.27
TRIM27-203ENST00000414543 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
TRIM27-203ENST00000414543 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
TRIM27-203ENST00000414543 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
TRIM27-203ENST00000414543 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
TRIM27-203ENST00000414543 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
TRIM27-203ENST00000414543 EHMT2Q96KQ7 1210 aa16.63■□□□□ 0.25
TRIM27-203ENST00000414543 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
TRIM27-203ENST00000414543 FGD5Q6ZNL6 1462 aa16.63■□□□□ 0.25
TRIM27-203ENST00000414543 URB2Q14146 1524 aaKnown RBP16.59■□□□□ 0.25
TRIM27-203ENST00000414543 KIF27Q86VH2 1401 aa16.57■□□□□ 0.24
TRIM27-203ENST00000414543 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
TRIM27-203ENST00000414543 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
TRIM27-203ENST00000414543 CUX2O14529 1486 aa16.52■□□□□ 0.24
TRIM27-203ENST00000414543 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
TRIM27-203ENST00000414543 KIF21BO75037 1637 aa16.5■□□□□ 0.23
TRIM27-203ENST00000414543 GOLGA3Q08378 1498 aa16.5■□□□□ 0.23
TRIM27-203ENST00000414543 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
TRIM27-203ENST00000414543 UBTFP17480 764 aaKnown RBP16.47■□□□□ 0.23
TRIM27-203ENST00000414543 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
TRIM27-203ENST00000414543 TNIKQ9UKE5 1360 aa16.44■□□□□ 0.22
TRIM27-203ENST00000414543 WDR62O43379 1518 aa16.42■□□□□ 0.22
TRIM27-203ENST00000414543 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
TRIM27-203ENST00000414543 IGF1RP08069 1367 aa16.41■□□□□ 0.22
TRIM27-203ENST00000414543 RAPGEF2Q9Y4G8 1499 aa16.41■□□□□ 0.22
TRIM27-203ENST00000414543 WDR97A6NE52 1622 aa16.4■□□□□ 0.22
TRIM27-203ENST00000414543 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
TRIM27-203ENST00000414543 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
TRIM27-203ENST00000414543 THOC2Q8NI27 1593 aaKnown RBP16.37■□□□□ 0.21
TRIM27-203ENST00000414543 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
TRIM27-203ENST00000414543 CEP162Q5TB80 1403 aa16.35■□□□□ 0.21
TRIM27-203ENST00000414543 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
TRIM27-203ENST00000414543 ABCA5Q8WWZ7 1642 aa16.33■□□□□ 0.2
TRIM27-203ENST00000414543 GAPVD1Q14C86 1478 aa16.32■□□□□ 0.2
TRIM27-203ENST00000414543 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
TRIM27-203ENST00000414543 CUL7Q14999 1698 aa16.29■□□□□ 0.2
TRIM27-203ENST00000414543 AQRO60306 1485 aaKnown RBP eCLIP16.24■□□□□ 0.191e-9■■■■■ 27.1
TRIM27-203ENST00000414543 CLIP1P30622 1438 aa16.24■□□□□ 0.19
TRIM27-203ENST00000414543 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
TRIM27-203ENST00000414543 ZNF608Q9ULD9 1512 aaPredicted RBP16.21■□□□□ 0.19
TRIM27-203ENST00000414543 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
TRIM27-203ENST00000414543 RANGAP1P46060 587 aaPredicted RBP16.21■□□□□ 0.19
TRIM27-203ENST00000414543 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
TRIM27-203ENST00000414543 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
TRIM27-203ENST00000414543 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
TRIM27-203ENST00000414543 CTTNBP2Q8WZ74 1663 aa16.1■□□□□ 0.17
TRIM27-203ENST00000414543 SNAPC4Q5SXM2 1469 aa16.09■□□□□ 0.17
TRIM27-203ENST00000414543 VPS8Q8N3P4 1428 aa16.08■□□□□ 0.17
TRIM27-203ENST00000414543 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
TRIM27-203ENST00000414543 ARHGAP35Q9NRY4 1499 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms