RNA–Protein interactions for RNA: ENST00000414243.1

REPS1-204, Transcript of RALBP1 associated Eps domain containing 1, humanhuman

TSL 3

Gene REPS1, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPS1-204ENST00000414243 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
REPS1-204ENST00000414243 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
REPS1-204ENST00000414243 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
REPS1-204ENST00000414243 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
REPS1-204ENST00000414243 ABCC9O60706 1549 aa20.86■□□□□ 0.93
REPS1-204ENST00000414243 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
REPS1-204ENST00000414243 ZCCHC6Q5VYS8 1495 aaKnown RBP20.51■□□□□ 0.87
REPS1-204ENST00000414243 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
REPS1-204ENST00000414243 DCAF1Q9Y4B6 1507 aa20.36■□□□□ 0.85
REPS1-204ENST00000414243 MYO15BQ96JP2 1530 aa20.35■□□□□ 0.85
REPS1-204ENST00000414243 NACADO15069 1562 aa20.33■□□□□ 0.84
REPS1-204ENST00000414243 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
REPS1-204ENST00000414243 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
REPS1-204ENST00000414243 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
REPS1-204ENST00000414243 UNC13AQ9UPW8 1703 aa19.74■□□□□ 0.75
REPS1-204ENST00000414243 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
REPS1-204ENST00000414243 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
REPS1-204ENST00000414243 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
REPS1-204ENST00000414243 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
REPS1-204ENST00000414243 FOXD1Q16676 465 aa19.05■□□□□ 0.64
REPS1-204ENST00000414243 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
REPS1-204ENST00000414243 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
REPS1-204ENST00000414243 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
REPS1-204ENST00000414243 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
REPS1-204ENST00000414243 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
REPS1-204ENST00000414243 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
REPS1-204ENST00000414243 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
REPS1-204ENST00000414243 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
REPS1-204ENST00000414243 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
REPS1-204ENST00000414243 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
REPS1-204ENST00000414243 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
REPS1-204ENST00000414243 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
REPS1-204ENST00000414243 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
REPS1-204ENST00000414243 WIZO95785 1651 aa18.67■□□□□ 0.58
REPS1-204ENST00000414243 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
REPS1-204ENST00000414243 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
REPS1-204ENST00000414243 SUPT5HO00267 1087 aaKnown RBP18.48■□□□□ 0.55
REPS1-204ENST00000414243 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
REPS1-204ENST00000414243 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
REPS1-204ENST00000414243 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
REPS1-204ENST00000414243 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
REPS1-204ENST00000414243 CFTRP13569 1480 aa18.17■□□□□ 0.5
REPS1-204ENST00000414243 NESP48681 1621 aa18.13■□□□□ 0.49
REPS1-204ENST00000414243 ADRA2BP18089 450 aa18.13■□□□□ 0.49
REPS1-204ENST00000414243 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
REPS1-204ENST00000414243 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
REPS1-204ENST00000414243 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
REPS1-204ENST00000414243 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
REPS1-204ENST00000414243 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
REPS1-204ENST00000414243 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
REPS1-204ENST00000414243 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
REPS1-204ENST00000414243 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.45
REPS1-204ENST00000414243 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
REPS1-204ENST00000414243 WDR62O43379 1518 aa17.79■□□□□ 0.44
REPS1-204ENST00000414243 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
REPS1-204ENST00000414243 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.44
REPS1-204ENST00000414243 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
REPS1-204ENST00000414243 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
REPS1-204ENST00000414243 CUX2O14529 1486 aa17.72■□□□□ 0.43
REPS1-204ENST00000414243 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
REPS1-204ENST00000414243 CUX1P39880 1505 aa17.7■□□□□ 0.42
REPS1-204ENST00000414243 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
REPS1-204ENST00000414243 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
REPS1-204ENST00000414243 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
REPS1-204ENST00000414243 POLA1P09884 1462 aaPredicted RBP17.61■□□□□ 0.41
REPS1-204ENST00000414243 MSH5O43196 834 aa17.6■□□□□ 0.41
REPS1-204ENST00000414243 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
REPS1-204ENST00000414243 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
REPS1-204ENST00000414243 SOGA1O94964 1423 aa17.53■□□□□ 0.4
REPS1-204ENST00000414243 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
REPS1-204ENST00000414243 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
REPS1-204ENST00000414243 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
REPS1-204ENST00000414243 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
REPS1-204ENST00000414243 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
REPS1-204ENST00000414243 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
REPS1-204ENST00000414243 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
REPS1-204ENST00000414243 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
REPS1-204ENST00000414243 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
REPS1-204ENST00000414243 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
REPS1-204ENST00000414243 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
REPS1-204ENST00000414243 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
REPS1-204ENST00000414243 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
REPS1-204ENST00000414243 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
REPS1-204ENST00000414243 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
REPS1-204ENST00000414243 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
REPS1-204ENST00000414243 EEA1Q15075 1411 aa17.23■□□□□ 0.35
REPS1-204ENST00000414243 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
REPS1-204ENST00000414243 IGF1RP08069 1367 aa17.21■□□□□ 0.35
REPS1-204ENST00000414243 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.34
REPS1-204ENST00000414243 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
REPS1-204ENST00000414243 CUL7Q14999 1698 aa17.16■□□□□ 0.34
REPS1-204ENST00000414243 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
REPS1-204ENST00000414243 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
REPS1-204ENST00000414243 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
REPS1-204ENST00000414243 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
REPS1-204ENST00000414243 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
REPS1-204ENST00000414243 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
REPS1-204ENST00000414243 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
REPS1-204ENST00000414243 CHD1O14646 1710 aa17.07■□□□□ 0.32
REPS1-204ENST00000414243 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms