RNA–Protein interactions for RNA: ENST00000413541.1

AC093117.1-201, humanhuman

TSL 2 BASIC

Gene AC093117.1, Length 2,171 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093117.1-201ENST00000413541 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
AC093117.1-201ENST00000413541 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
AC093117.1-201ENST00000413541 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
AC093117.1-201ENST00000413541 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
AC093117.1-201ENST00000413541 EHMT2Q96KQ7 1210 aa17.83■□□□□ 0.44
AC093117.1-201ENST00000413541 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
AC093117.1-201ENST00000413541 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
AC093117.1-201ENST00000413541 RTN4Q9NQC3 1192 aaKnown RBP16.89■□□□□ 0.3
AC093117.1-201ENST00000413541 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
AC093117.1-201ENST00000413541 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
AC093117.1-201ENST00000413541 KCNA4P22459 653 aa16.6■□□□□ 0.25
AC093117.1-201ENST00000413541 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
AC093117.1-201ENST00000413541 ABCC9O60706 1549 aa16.5■□□□□ 0.23
AC093117.1-201ENST00000413541 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
AC093117.1-201ENST00000413541 DAXXQ9UER7 740 aaPredicted RBP16.22■□□□□ 0.19
AC093117.1-201ENST00000413541 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
AC093117.1-201ENST00000413541 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
AC093117.1-201ENST00000413541 PRKCSHP14314 528 aaPredicted RBP15.96■□□□□ 0.14
AC093117.1-201ENST00000413541 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
AC093117.1-201ENST00000413541 NACADO15069 1562 aa15.82■□□□□ 0.12
AC093117.1-201ENST00000413541 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
AC093117.1-201ENST00000413541 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
AC093117.1-201ENST00000413541 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
AC093117.1-201ENST00000413541 ADRA2BP18089 450 aa15.6■□□□□ 0.09
AC093117.1-201ENST00000413541 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
AC093117.1-201ENST00000413541 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
AC093117.1-201ENST00000413541 TAOK2Q9UL54 1235 aa15.52■□□□□ 0.08
AC093117.1-201ENST00000413541 ARXQ96QS3 562 aa15.51■□□□□ 0.07
AC093117.1-201ENST00000413541 TIMELESSQ9UNS1 1208 aa15.51■□□□□ 0.07
AC093117.1-201ENST00000413541 BCANQ96GW7 911 aa15.39■□□□□ 0.05
AC093117.1-201ENST00000413541 ZBTB22O15209 634 aa15.38■□□□□ 0.05
AC093117.1-201ENST00000413541 BICRAQ9NZM4 1560 aa15.37■□□□□ 0.05
AC093117.1-201ENST00000413541 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
AC093117.1-201ENST00000413541 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
AC093117.1-201ENST00000413541 TULP1O00294 542 aaPredicted RBP15.32■□□□□ 0.04
AC093117.1-201ENST00000413541 TPRNQ4KMQ1 711 aa15.28■□□□□ 0.04
AC093117.1-201ENST00000413541 PLCB2Q00722 1185 aa15.26■□□□□ 0.03
AC093117.1-201ENST00000413541 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.02
AC093117.1-201ENST00000413541 FOXD1Q16676 465 aa15.18■□□□□ 0.02
AC093117.1-201ENST00000413541 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
AC093117.1-201ENST00000413541 HAP1P54257 671 aaPredicted RBP15.11■□□□□ 0.01
AC093117.1-201ENST00000413541 HOMEZQ8IX15 550 aa15.07■□□□□ 0
AC093117.1-201ENST00000413541 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
AC093117.1-201ENST00000413541 RANGAP1P46060 587 aaPredicted RBP14.97□□□□□ -0.01
AC093117.1-201ENST00000413541 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
AC093117.1-201ENST00000413541 FKBP8Q14318 412 aa14.94□□□□□ -0.02
AC093117.1-201ENST00000413541 NPM3O75607 178 aaKnown RBP14.9□□□□□ -0.02
AC093117.1-201ENST00000413541 GTF3C3Q9Y5Q9 886 aa14.9□□□□□ -0.02
AC093117.1-201ENST00000413541 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
AC093117.1-201ENST00000413541 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
AC093117.1-201ENST00000413541 APLP2Q06481 763 aa14.8□□□□□ -0.04
AC093117.1-201ENST00000413541 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
AC093117.1-201ENST00000413541 PODXL2Q9NZ53 605 aa14.74□□□□□ -0.05
AC093117.1-201ENST00000413541 VSIG10Q8N0Z9 540 aa14.73□□□□□ -0.05
AC093117.1-201ENST00000413541 SMARCA4P51532 1647 aa14.68□□□□□ -0.06
AC093117.1-201ENST00000413541 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
AC093117.1-201ENST00000413541 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
AC093117.1-201ENST00000413541 ERICH6Q7L0X2 663 aa14.6□□□□□ -0.07
AC093117.1-201ENST00000413541 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
AC093117.1-201ENST00000413541 TTBK1Q5TCY1 1321 aaPredicted RBP14.59□□□□□ -0.07
AC093117.1-201ENST00000413541 KDM2AQ9Y2K7 1162 aa14.59□□□□□ -0.07
AC093117.1-201ENST00000413541 SMARCA2P51531 1590 aa14.58□□□□□ -0.07
AC093117.1-201ENST00000413541 TMEM132AQ24JP5 1023 aa14.57□□□□□ -0.08
AC093117.1-201ENST00000413541 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
AC093117.1-201ENST00000413541 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
AC093117.1-201ENST00000413541 NCAPD3P42695 1498 aa14.55□□□□□ -0.08
AC093117.1-201ENST00000413541 HMGXB3Q12766 1538 aa14.53□□□□□ -0.08
AC093117.1-201ENST00000413541 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
AC093117.1-201ENST00000413541 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.09
AC093117.1-201ENST00000413541 C14orf37Q86TY3 774 aa14.49□□□□□ -0.09
AC093117.1-201ENST00000413541 FBLN2P98095 1184 aa14.49□□□□□ -0.09
AC093117.1-201ENST00000413541 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
AC093117.1-201ENST00000413541 WIZO95785 1651 aa14.41□□□□□ -0.1
AC093117.1-201ENST00000413541 MYT1Q01538 1121 aa14.37□□□□□ -0.11
AC093117.1-201ENST00000413541 NPM2Q86SE8 214 aaKnown RBP14.35□□□□□ -0.11
AC093117.1-201ENST00000413541 PIAS4Q8N2W9 510 aaPredicted RBP14.34□□□□□ -0.11
AC093117.1-201ENST00000413541 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
AC093117.1-201ENST00000413541 NESP48681 1621 aa14.25□□□□□ -0.13
AC093117.1-201ENST00000413541 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
AC093117.1-201ENST00000413541 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
AC093117.1-201ENST00000413541 LAMC3Q9Y6N6 1575 aa14.24□□□□□ -0.13
AC093117.1-201ENST00000413541 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
AC093117.1-201ENST00000413541 TRIM26Q12899 539 aaPredicted RBP14.16□□□□□ -0.14
AC093117.1-201ENST00000413541 KIF21AQ7Z4S6 1674 aa14.15□□□□□ -0.14
AC093117.1-201ENST00000413541 CADPSQ9ULU8 1353 aa14.13□□□□□ -0.15
AC093117.1-201ENST00000413541 PDS5BQ9NTI5 1447 aa14.1□□□□□ -0.15
AC093117.1-201ENST00000413541 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
AC093117.1-201ENST00000413541 FBXO3Q9UK99 471 aa14.09□□□□□ -0.15
AC093117.1-201ENST00000413541 CUX2O14529 1486 aa14.09□□□□□ -0.15
AC093117.1-201ENST00000413541 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
AC093117.1-201ENST00000413541 UBTFP17480 764 aaKnown RBP14.06□□□□□ -0.16
AC093117.1-201ENST00000413541 PAXIP1Q6ZW49 1069 aaPredicted RBP14.05□□□□□ -0.16
AC093117.1-201ENST00000413541 CFTRP13569 1480 aa14.04□□□□□ -0.16
AC093117.1-201ENST00000413541 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
AC093117.1-201ENST00000413541 NBR1Q14596 966 aa14.02□□□□□ -0.16
AC093117.1-201ENST00000413541 CFAP44Q96MT7 982 aa14.02□□□□□ -0.16
AC093117.1-201ENST00000413541 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
AC093117.1-201ENST00000413541 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
AC093117.1-201ENST00000413541 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
AC093117.1-201ENST00000413541 HRCP23327 699 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms