RNA–Protein interactions for RNA: ENST00000413474.5

SDHAP1-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 5

Gene SDHAP1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-202ENST00000413474 NISCHQ9Y2I1 1504 aa43.38■■■■■ 4.53
SDHAP1-202ENST00000413474 ABCC9O60706 1549 aa38.83■■■■□ 3.81
SDHAP1-202ENST00000413474 CCDC180Q9P1Z9 1646 aa38.65■■■■□ 3.78
SDHAP1-202ENST00000413474 DNAJC5BQ9UF47 199 aa37.05■■■■□ 3.52
SDHAP1-202ENST00000413474 RB1CC1Q8TDY2 1594 aa36.58■■■■□ 3.45
SDHAP1-202ENST00000413474 NACADO15069 1562 aa36.36■■■■□ 3.41
SDHAP1-202ENST00000413474 DCAF8L2P0C7V8 631 aa36.28■■■■□ 3.4
SDHAP1-202ENST00000413474 PABPN1Q86U42 306 aaKnown RBP eCLIP36.12■■■■□ 3.37
SDHAP1-202ENST00000413474 ZCCHC6Q5VYS8 1495 aaKnown RBP36.11■■■■□ 3.37
SDHAP1-202ENST00000413474 MYO15BQ96JP2 1530 aa36.1■■■■□ 3.37
SDHAP1-202ENST00000413474 DCAF1Q9Y4B6 1507 aa35.91■■■■□ 3.34
SDHAP1-202ENST00000413474 UNC13AQ9UPW8 1703 aa35.77■■■■□ 3.32
SDHAP1-202ENST00000413474 BICRAQ9NZM4 1560 aa35.55■■■■□ 3.28
SDHAP1-202ENST00000413474 SCRIBQ14160 1630 aa35.22■■■■□ 3.23
SDHAP1-202ENST00000413474 CECR2Q9BXF3 1484 aa35.01■■■■□ 3.19
SDHAP1-202ENST00000413474 CC2D2AQ9P2K1 1620 aa34.99■■■■□ 3.19
SDHAP1-202ENST00000413474 SHROOM4Q9ULL8 1493 aa34.99■■■■□ 3.19
SDHAP1-202ENST00000413474 EIF4G1Q04637 1599 aaKnown RBP34.74■■■■□ 3.15
SDHAP1-202ENST00000413474 DNAJC5Q9H3Z4 198 aa34.44■■■■□ 3.1
SDHAP1-202ENST00000413474 SMARCA4P51532 1647 aa33.68■■■□□ 2.98
SDHAP1-202ENST00000413474 BAZ1AQ9NRL2 1556 aaPredicted RBP33.67■■■□□ 2.98
SDHAP1-202ENST00000413474 CUX2O14529 1486 aa33.63■■■□□ 2.97
SDHAP1-202ENST00000413474 ERCC6Q03468 1493 aa33.56■■■□□ 2.96
SDHAP1-202ENST00000413474 SMARCA2P51531 1590 aa33.52■■■□□ 2.96
SDHAP1-202ENST00000413474 NCAPD3P42695 1498 aa33.52■■■□□ 2.96
SDHAP1-202ENST00000413474 ATAD2BQ9ULI0 1458 aa33.51■■■□□ 2.96
SDHAP1-202ENST00000413474 MROH2BQ7Z745 1585 aa33.39■■■□□ 2.94
SDHAP1-202ENST00000413474 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
SDHAP1-202ENST00000413474 PEG3Q9GZU2 1588 aa33.36■■■□□ 2.93
SDHAP1-202ENST00000413474 BAZ1BQ9UIG0 1483 aaKnown RBP33.27■■■□□ 2.92
SDHAP1-202ENST00000413474 NESP48681 1621 aa33.17■■■□□ 2.9
SDHAP1-202ENST00000413474 WIZO95785 1651 aa33.04■■■□□ 2.88
SDHAP1-202ENST00000413474 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
SDHAP1-202ENST00000413474 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
SDHAP1-202ENST00000413474 TRIM41Q8WV44 630 aa32.76■■■□□ 2.83
SDHAP1-202ENST00000413474 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
SDHAP1-202ENST00000413474 TOP2AP11388 1531 aaKnown RBP32.73■■■□□ 2.83
SDHAP1-202ENST00000413474 KIF21AQ7Z4S6 1674 aa32.68■■■□□ 2.82
SDHAP1-202ENST00000413474 PDS5BQ9NTI5 1447 aa32.62■■■□□ 2.81
SDHAP1-202ENST00000413474 CADPSQ9ULU8 1353 aa32.54■■■□□ 2.8
SDHAP1-202ENST00000413474 MRC2Q9UBG0 1479 aa32.36■■■□□ 2.77
SDHAP1-202ENST00000413474 CFTRP13569 1480 aa32.32■■■□□ 2.76
SDHAP1-202ENST00000413474 CCDC88BA6NC98 1476 aa32.3■■■□□ 2.76
SDHAP1-202ENST00000413474 WDR62O43379 1518 aa32.27■■■□□ 2.76
SDHAP1-202ENST00000413474 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
SDHAP1-202ENST00000413474 CEP164Q9UPV0 1460 aa32.17■■■□□ 2.74
SDHAP1-202ENST00000413474 OSCARQ8IYS5 282 aa32.1■■■□□ 2.73
SDHAP1-202ENST00000413474 PRDM2Q13029 1718 aa32.09■■■□□ 2.73
SDHAP1-202ENST00000413474 SUPT5HO00267 1087 aaKnown RBP32.09■■■□□ 2.73
SDHAP1-202ENST00000413474 URB2Q14146 1524 aaKnown RBP31.83■■■□□ 2.69
SDHAP1-202ENST00000413474 RIMBP3CA6NJZ7 1639 aa31.7■■■□□ 2.66
SDHAP1-202ENST00000413474 RIMBP3BA6NNM3 1639 aa31.7■■■□□ 2.66
SDHAP1-202ENST00000413474 RIMBP3Q9UFD9 1639 aa31.7■■■□□ 2.66
SDHAP1-202ENST00000413474 ABCC8Q09428 1581 aa31.69■■■□□ 2.66
SDHAP1-202ENST00000413474 TOPBP1Q92547 1522 aa31.64■■■□□ 2.66
SDHAP1-202ENST00000413474 DNMBPQ6XZF7 1577 aa31.62■■■□□ 2.65
SDHAP1-202ENST00000413474 ZNF608Q9ULD9 1512 aaPredicted RBP31.56■■■□□ 2.64
SDHAP1-202ENST00000413474 ARHGEF11O15085 1522 aa31.52■■■□□ 2.64
SDHAP1-202ENST00000413474 IFT140Q96RY7 1462 aa31.5■■■□□ 2.63
SDHAP1-202ENST00000413474 CYB5RLQ6IPT4 315 aa31.44■■■□□ 2.62
SDHAP1-202ENST00000413474 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
SDHAP1-202ENST00000413474 CUX1P39880 1505 aa31.34■■■□□ 2.61
SDHAP1-202ENST00000413474 TRHP20396 242 aaPredicted RBP31.32■■■□□ 2.6
SDHAP1-202ENST00000413474 TARBP1Q13395 1621 aaKnown RBP31.29■■■□□ 2.6
SDHAP1-202ENST00000413474 EIF4G3O43432 1585 aaKnown RBP31.29■■■□□ 2.6
SDHAP1-202ENST00000413474 FGD5Q6ZNL6 1462 aa31.28■■■□□ 2.6
SDHAP1-202ENST00000413474 SOGA1O94964 1423 aa31.24■■■□□ 2.59
SDHAP1-202ENST00000413474 FBLN2P98095 1184 aa31.22■■■□□ 2.59
SDHAP1-202ENST00000413474 AQRO60306 1485 aaKnown RBP eCLIP31.21■■■□□ 2.598e-7■■■■■ 51.3
SDHAP1-202ENST00000413474 CHD1O14646 1710 aa31.21■■■□□ 2.59
SDHAP1-202ENST00000413474 RAD54L2Q9Y4B4 1467 aa31.2■■■□□ 2.58
SDHAP1-202ENST00000413474 ARAP1Q96P48 1450 aa31.17■■■□□ 2.58
SDHAP1-202ENST00000413474 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
SDHAP1-202ENST00000413474 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
SDHAP1-202ENST00000413474 TOP2BQ02880 1626 aa31.09■■■□□ 2.57
SDHAP1-202ENST00000413474 BIVM-ERCC5R4GMW8 1640 aa31.08■■■□□ 2.57
SDHAP1-202ENST00000413474 TDRD9Q8NDG6 1382 aaKnown RBP31.05■■■□□ 2.56
SDHAP1-202ENST00000413474 SYNJ1O43426 1573 aa31.05■■■□□ 2.56
SDHAP1-202ENST00000413474 ABCA10Q8WWZ4 1543 aa30.98■■■□□ 2.55
SDHAP1-202ENST00000413474 GRIN2BQ13224 1484 aa30.91■■■□□ 2.54
SDHAP1-202ENST00000413474 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.53
SDHAP1-202ENST00000413474 AEBP2Q6ZN18 517 aaPredicted RBP30.87■■■□□ 2.53
SDHAP1-202ENST00000413474 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
SDHAP1-202ENST00000413474 ABCA5Q8WWZ7 1642 aa30.86■■■□□ 2.53
SDHAP1-202ENST00000413474 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
SDHAP1-202ENST00000413474 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
SDHAP1-202ENST00000413474 PBRM1Q86U86 1689 aa30.83■■■□□ 2.53
SDHAP1-202ENST00000413474 CLASP1Q7Z460 1538 aa30.79■■■□□ 2.52
SDHAP1-202ENST00000413474 SYNJ2O15056 1496 aa30.72■■■□□ 2.51
SDHAP1-202ENST00000413474 ERICH3Q5RHP9 1530 aa30.63■■■□□ 2.49
SDHAP1-202ENST00000413474 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
SDHAP1-202ENST00000413474 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
SDHAP1-202ENST00000413474 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
SDHAP1-202ENST00000413474 GRIN2AQ12879 1464 aa30.5■■■□□ 2.47
SDHAP1-202ENST00000413474 IGF1RP08069 1367 aa30.35■■■□□ 2.45
SDHAP1-202ENST00000413474 NUP160Q12769 1436 aa30.35■■■□□ 2.45
SDHAP1-202ENST00000413474 CUL7Q14999 1698 aa30.35■■■□□ 2.45
SDHAP1-202ENST00000413474 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
SDHAP1-202ENST00000413474 CEP170Q5SW79 1584 aa30.33■■■□□ 2.45
SDHAP1-202ENST00000413474 CARMIL1Q5VZK9 1371 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms