RNA–Protein interactions for RNA: ENST00000413469.1

LOXL3-206, Transcript of lysyl oxidase like 3, humanhuman

TSL 3

Gene LOXL3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-206ENST00000413469 NISCHQ9Y2I1 1504 aa41.88■■■■■ 4.29
LOXL3-206ENST00000413469 ABCC9O60706 1549 aa38.32■■■■□ 3.72
LOXL3-206ENST00000413469 CCDC180Q9P1Z9 1646 aa37.66■■■■□ 3.62
LOXL3-206ENST00000413469 DNAJC5BQ9UF47 199 aa36.38■■■■□ 3.41
LOXL3-206ENST00000413469 RB1CC1Q8TDY2 1594 aa36.21■■■■□ 3.39
LOXL3-206ENST00000413469 DCAF8L2P0C7V8 631 aa35.89■■■■□ 3.34
LOXL3-206ENST00000413469 NACADO15069 1562 aa35.84■■■■□ 3.33
LOXL3-206ENST00000413469 PABPN1Q86U42 306 aaKnown RBP eCLIP35.71■■■■□ 3.31
LOXL3-206ENST00000413469 MYO15BQ96JP2 1530 aa35.15■■■■□ 3.22
LOXL3-206ENST00000413469 UNC13AQ9UPW8 1703 aa35.14■■■■□ 3.22
LOXL3-206ENST00000413469 BICRAQ9NZM4 1560 aa35.05■■■■□ 3.2
LOXL3-206ENST00000413469 SHROOM4Q9ULL8 1493 aa34.63■■■■□ 3.13
LOXL3-206ENST00000413469 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
LOXL3-206ENST00000413469 ZCCHC6Q5VYS8 1495 aaKnown RBP34.56■■■■□ 3.12
LOXL3-206ENST00000413469 DCAF1Q9Y4B6 1507 aa34.52■■■■□ 3.12
LOXL3-206ENST00000413469 CC2D2AQ9P2K1 1620 aa34.49■■■■□ 3.11
LOXL3-206ENST00000413469 SCRIBQ14160 1630 aa34.38■■■■□ 3.09
LOXL3-206ENST00000413469 EIF4G1Q04637 1599 aaKnown RBP34.31■■■■□ 3.08
LOXL3-206ENST00000413469 DNAJC5Q9H3Z4 198 aa33.84■■■■□ 3.01
LOXL3-206ENST00000413469 ERCC6Q03468 1493 aa33.2■■■□□ 2.91
LOXL3-206ENST00000413469 CUX2O14529 1486 aa33.19■■■□□ 2.9
LOXL3-206ENST00000413469 NCAPD3P42695 1498 aa33.12■■■□□ 2.89
LOXL3-206ENST00000413469 ATAD2BQ9ULI0 1458 aa32.95■■■□□ 2.87
LOXL3-206ENST00000413469 SMARCA2P51531 1590 aa32.83■■■□□ 2.85
LOXL3-206ENST00000413469 HMGXB3Q12766 1538 aa32.76■■■□□ 2.83
LOXL3-206ENST00000413469 NESP48681 1621 aa32.73■■■□□ 2.83
LOXL3-206ENST00000413469 SMARCA4P51532 1647 aa32.71■■■□□ 2.83
LOXL3-206ENST00000413469 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
LOXL3-206ENST00000413469 BAZ1AQ9NRL2 1556 aaPredicted RBP32.55■■■□□ 2.8
LOXL3-206ENST00000413469 LAMC3Q9Y6N6 1575 aa32.41■■■□□ 2.78
LOXL3-206ENST00000413469 PDS5BQ9NTI5 1447 aa32.38■■■□□ 2.77
LOXL3-206ENST00000413469 THOC2Q8NI27 1593 aaKnown RBP32.37■■■□□ 2.77
LOXL3-206ENST00000413469 PEG3Q9GZU2 1588 aa32.36■■■□□ 2.77
LOXL3-206ENST00000413469 TRIM41Q8WV44 630 aa32.25■■■□□ 2.75
LOXL3-206ENST00000413469 MROH2BQ7Z745 1585 aa32.24■■■□□ 2.75
LOXL3-206ENST00000413469 KIF21AQ7Z4S6 1674 aa32.16■■■□□ 2.74
LOXL3-206ENST00000413469 CADPSQ9ULU8 1353 aa32.16■■■□□ 2.74
LOXL3-206ENST00000413469 MRC2Q9UBG0 1479 aa32.04■■■□□ 2.72
LOXL3-206ENST00000413469 WDR62O43379 1518 aa31.9■■■□□ 2.7
LOXL3-206ENST00000413469 CEP164Q9UPV0 1460 aa31.84■■■□□ 2.69
LOXL3-206ENST00000413469 OSCARQ8IYS5 282 aa31.79■■■□□ 2.68
LOXL3-206ENST00000413469 WIZO95785 1651 aa31.79■■■□□ 2.68
LOXL3-206ENST00000413469 FANCD2Q9BXW9 1451 aa31.76■■■□□ 2.67
LOXL3-206ENST00000413469 CFTRP13569 1480 aa31.63■■■□□ 2.65
LOXL3-206ENST00000413469 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
LOXL3-206ENST00000413469 URB2Q14146 1524 aaKnown RBP31.46■■■□□ 2.63
LOXL3-206ENST00000413469 TOP2AP11388 1531 aaKnown RBP31.39■■■□□ 2.62
LOXL3-206ENST00000413469 IFT140Q96RY7 1462 aa31.23■■■□□ 2.59
LOXL3-206ENST00000413469 ZNF608Q9ULD9 1512 aaPredicted RBP31.18■■■□□ 2.58
LOXL3-206ENST00000413469 RIMBP3CA6NJZ7 1639 aa31.17■■■□□ 2.58
LOXL3-206ENST00000413469 RIMBP3BA6NNM3 1639 aa31.17■■■□□ 2.58
LOXL3-206ENST00000413469 RIMBP3Q9UFD9 1639 aa31.17■■■□□ 2.58
LOXL3-206ENST00000413469 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
LOXL3-206ENST00000413469 CYB5RLQ6IPT4 315 aa31.08■■■□□ 2.57
LOXL3-206ENST00000413469 ARHGEF11O15085 1522 aa31.07■■■□□ 2.56
LOXL3-206ENST00000413469 TOPBP1Q92547 1522 aa31.06■■■□□ 2.56
LOXL3-206ENST00000413469 ABCC8Q09428 1581 aa31.05■■■□□ 2.56
LOXL3-206ENST00000413469 PRDM2Q13029 1718 aa31.04■■■□□ 2.56
LOXL3-206ENST00000413469 FBLN2P98095 1184 aa30.98■■■□□ 2.55
LOXL3-206ENST00000413469 TRHP20396 242 aaPredicted RBP30.97■■■□□ 2.55
LOXL3-206ENST00000413469 AQRO60306 1485 aaKnown RBP eCLIP30.9■■■□□ 2.54
LOXL3-206ENST00000413469 EIF4G3O43432 1585 aaKnown RBP30.9■■■□□ 2.54
LOXL3-206ENST00000413469 DNMBPQ6XZF7 1577 aa30.88■■■□□ 2.53
LOXL3-206ENST00000413469 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
LOXL3-206ENST00000413469 ARAP1Q96P48 1450 aa30.72■■■□□ 2.51
LOXL3-206ENST00000413469 POLA1P09884 1462 aaPredicted RBP30.71■■■□□ 2.51
LOXL3-206ENST00000413469 CHD1O14646 1710 aa30.7■■■□□ 2.51
LOXL3-206ENST00000413469 TDRD9Q8NDG6 1382 aaKnown RBP30.68■■■□□ 2.5
LOXL3-206ENST00000413469 SOGA1O94964 1423 aa30.68■■■□□ 2.5
LOXL3-206ENST00000413469 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
LOXL3-206ENST00000413469 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
LOXL3-206ENST00000413469 SNAPC4Q5SXM2 1469 aa30.53■■■□□ 2.48
LOXL3-206ENST00000413469 FGD5Q6ZNL6 1462 aa30.46■■■□□ 2.47
LOXL3-206ENST00000413469 AEBP2Q6ZN18 517 aaPredicted RBP30.45■■■□□ 2.47
LOXL3-206ENST00000413469 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
LOXL3-206ENST00000413469 SYNJ1O43426 1573 aa30.43■■■□□ 2.46
LOXL3-206ENST00000413469 GRIN2BQ13224 1484 aa30.42■■■□□ 2.46
LOXL3-206ENST00000413469 WDR97A6NE52 1622 aa30.41■■■□□ 2.46
LOXL3-206ENST00000413469 CLASP1Q7Z460 1538 aa30.4■■■□□ 2.46
LOXL3-206ENST00000413469 SYNJ2O15056 1496 aa30.35■■■□□ 2.45
LOXL3-206ENST00000413469 CUX1P39880 1505 aa30.32■■■□□ 2.44
LOXL3-206ENST00000413469 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
LOXL3-206ENST00000413469 ABCA10Q8WWZ4 1543 aa30.09■■■□□ 2.41
LOXL3-206ENST00000413469 PBRM1Q86U86 1689 aa30.07■■■□□ 2.4
LOXL3-206ENST00000413469 GRIN2AQ12879 1464 aa29.99■■■□□ 2.39
LOXL3-206ENST00000413469 WRNQ14191 1432 aaPredicted RBP eCLIP29.98■■■□□ 2.39
LOXL3-206ENST00000413469 ABCA5Q8WWZ7 1642 aa29.98■■■□□ 2.39
LOXL3-206ENST00000413469 SUPT5HO00267 1087 aaKnown RBP29.94■■■□□ 2.38
LOXL3-206ENST00000413469 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
LOXL3-206ENST00000413469 NUP160Q12769 1436 aa29.88■■■□□ 2.37
LOXL3-206ENST00000413469 FHAD1B1AJZ9 1412 aa29.86■■■□□ 2.37
LOXL3-206ENST00000413469 CEP170Q5SW79 1584 aa29.86■■■□□ 2.37
LOXL3-206ENST00000413469 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
LOXL3-206ENST00000413469 JPH4Q96JJ6 628 aa29.75■■■□□ 2.35
LOXL3-206ENST00000413469 PRG4Q92954 1404 aaPredicted RBP29.73■■■□□ 2.35
LOXL3-206ENST00000413469 NPM1P06748 294 aaKnown RBP eCLIP29.73■■■□□ 2.35
LOXL3-206ENST00000413469 SHROOM2Q13796 1616 aa29.7■■■□□ 2.34
LOXL3-206ENST00000413469 ERICH3Q5RHP9 1530 aa29.7■■■□□ 2.34
LOXL3-206ENST00000413469 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
LOXL3-206ENST00000413469 FAM69CQ0P6D2 419 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms