RNA–Protein interactions for RNA: ENST00000413081.1

TNRC18-204, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-204ENST00000413081 NISCHQ9Y2I1 1504 aa47.61■■■■■ 5.21
TNRC18-204ENST00000413081 ABCC9O60706 1549 aa43.34■■■■■ 4.53
TNRC18-204ENST00000413081 CCDC180Q9P1Z9 1646 aa42.97■■■■■ 4.47
TNRC18-204ENST00000413081 RB1CC1Q8TDY2 1594 aa41.11■■■■■ 4.17
TNRC18-204ENST00000413081 DNAJC5BQ9UF47 199 aa40.92■■■■■ 4.14
TNRC18-204ENST00000413081 NACADO15069 1562 aa40.69■■■■■ 4.11
TNRC18-204ENST00000413081 DCAF8L2P0C7V8 631 aa40.43■■■■■ 4.06
TNRC18-204ENST00000413081 PABPN1Q86U42 306 aaKnown RBP eCLIP40.26■■■■■ 4.04
TNRC18-204ENST00000413081 UNC13AQ9UPW8 1703 aa40.16■■■■■ 4.02
TNRC18-204ENST00000413081 MYO15BQ96JP2 1530 aa39.96■■■■□ 3.99
TNRC18-204ENST00000413081 BICRAQ9NZM4 1560 aa39.85■■■■□ 3.97
TNRC18-204ENST00000413081 ZCCHC6Q5VYS8 1495 aaKnown RBP39.38■■■■□ 3.9
TNRC18-204ENST00000413081 SHROOM4Q9ULL8 1493 aa39.33■■■■□ 3.89
TNRC18-204ENST00000413081 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
TNRC18-204ENST00000413081 CC2D2AQ9P2K1 1620 aa39.14■■■■□ 3.86
TNRC18-204ENST00000413081 SCRIBQ14160 1630 aa39.13■■■■□ 3.85
TNRC18-204ENST00000413081 CECR2Q9BXF3 1484 aa39.09■■■■□ 3.85
TNRC18-204ENST00000413081 EIF4G1Q04637 1599 aaKnown RBP38.95■■■■□ 3.83
TNRC18-204ENST00000413081 DNAJC5Q9H3Z4 198 aa37.93■■■■□ 3.66
TNRC18-204ENST00000413081 CUX2O14529 1486 aa37.54■■■■□ 3.6
TNRC18-204ENST00000413081 NCAPD3P42695 1498 aa37.53■■■■□ 3.6
TNRC18-204ENST00000413081 ERCC6Q03468 1493 aa37.51■■■■□ 3.59
TNRC18-204ENST00000413081 ATAD2BQ9ULI0 1458 aa37.37■■■■□ 3.57
TNRC18-204ENST00000413081 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
TNRC18-204ENST00000413081 SMARCA4P51532 1647 aa37.27■■■■□ 3.56
TNRC18-204ENST00000413081 HMGXB3Q12766 1538 aa37.26■■■■□ 3.56
TNRC18-204ENST00000413081 NESP48681 1621 aa37.09■■■■□ 3.53
TNRC18-204ENST00000413081 BAZ1BQ9UIG0 1483 aaKnown RBP37.04■■■■□ 3.52
TNRC18-204ENST00000413081 BAZ1AQ9NRL2 1556 aaPredicted RBP37.04■■■■□ 3.52
TNRC18-204ENST00000413081 PEG3Q9GZU2 1588 aa36.87■■■■□ 3.49
TNRC18-204ENST00000413081 THOC2Q8NI27 1593 aaKnown RBP36.83■■■■□ 3.49
TNRC18-204ENST00000413081 LAMC3Q9Y6N6 1575 aa36.82■■■■□ 3.48
TNRC18-204ENST00000413081 MROH2BQ7Z745 1585 aa36.68■■■■□ 3.46
TNRC18-204ENST00000413081 KIF21AQ7Z4S6 1674 aa36.65■■■■□ 3.46
TNRC18-204ENST00000413081 PDS5BQ9NTI5 1447 aa36.61■■■■□ 3.45
TNRC18-204ENST00000413081 CADPSQ9ULU8 1353 aa36.39■■■■□ 3.42
TNRC18-204ENST00000413081 MRC2Q9UBG0 1479 aa36.32■■■■□ 3.41
TNRC18-204ENST00000413081 WIZO95785 1651 aa36.25■■■■□ 3.39
TNRC18-204ENST00000413081 WDR62O43379 1518 aa36.24■■■■□ 3.39
TNRC18-204ENST00000413081 TRIM41Q8WV44 630 aa36.18■■■■□ 3.38
TNRC18-204ENST00000413081 CEP164Q9UPV0 1460 aa36.11■■■■□ 3.37
TNRC18-204ENST00000413081 FANCD2Q9BXW9 1451 aa36■■■■□ 3.35
TNRC18-204ENST00000413081 CFTRP13569 1480 aa35.88■■■■□ 3.33
TNRC18-204ENST00000413081 TOP2AP11388 1531 aaKnown RBP35.77■■■■□ 3.32
TNRC18-204ENST00000413081 RSF1Q96T23 1441 aaPredicted RBP35.75■■■■□ 3.31
TNRC18-204ENST00000413081 OSCARQ8IYS5 282 aa35.74■■■■□ 3.31
TNRC18-204ENST00000413081 URB2Q14146 1524 aaKnown RBP35.71■■■■□ 3.31
TNRC18-204ENST00000413081 PRDM2Q13029 1718 aa35.57■■■■□ 3.29
TNRC18-204ENST00000413081 IFT140Q96RY7 1462 aa35.38■■■■□ 3.25
TNRC18-204ENST00000413081 RIMBP3CA6NJZ7 1639 aa35.35■■■■□ 3.25
TNRC18-204ENST00000413081 RIMBP3BA6NNM3 1639 aa35.35■■■■□ 3.25
TNRC18-204ENST00000413081 RIMBP3Q9UFD9 1639 aa35.35■■■■□ 3.25
TNRC18-204ENST00000413081 CCDC88BA6NC98 1476 aa35.34■■■■□ 3.25
TNRC18-204ENST00000413081 ZNF608Q9ULD9 1512 aaPredicted RBP35.33■■■■□ 3.25
TNRC18-204ENST00000413081 TOPBP1Q92547 1522 aa35.27■■■■□ 3.24
TNRC18-204ENST00000413081 ABCC8Q09428 1581 aa35.19■■■■□ 3.22
TNRC18-204ENST00000413081 ARHGEF11O15085 1522 aa35.18■■■■□ 3.22
TNRC18-204ENST00000413081 EIF4G3O43432 1585 aaKnown RBP35.17■■■■□ 3.22
TNRC18-204ENST00000413081 DNMBPQ6XZF7 1577 aa35.13■■■■□ 3.21
TNRC18-204ENST00000413081 CHD1O14646 1710 aa35■■■■□ 3.19
TNRC18-204ENST00000413081 TARBP1Q13395 1621 aaKnown RBP34.98■■■■□ 3.19
TNRC18-204ENST00000413081 AQRO60306 1485 aaKnown RBP eCLIP34.97■■■■□ 3.192e-7■■■□□ 17.4
TNRC18-204ENST00000413081 CYB5RLQ6IPT4 315 aa34.94■■■■□ 3.18
TNRC18-204ENST00000413081 FBLN2P98095 1184 aa34.88■■■■□ 3.17
TNRC18-204ENST00000413081 POLA1P09884 1462 aaPredicted RBP34.88■■■■□ 3.17
TNRC18-204ENST00000413081 ARAP1Q96P48 1450 aa34.79■■■■□ 3.16
TNRC18-204ENST00000413081 TRHP20396 242 aaPredicted RBP34.75■■■■□ 3.15
TNRC18-204ENST00000413081 RAD54L2Q9Y4B4 1467 aa34.75■■■■□ 3.15
TNRC18-204ENST00000413081 SOGA1O94964 1423 aa34.72■■■■□ 3.15
TNRC18-204ENST00000413081 TDRD9Q8NDG6 1382 aaKnown RBP34.69■■■■□ 3.14
TNRC18-204ENST00000413081 SNAPC4Q5SXM2 1469 aa34.64■■■■□ 3.14
TNRC18-204ENST00000413081 WDR97A6NE52 1622 aa34.63■■■■□ 3.13
TNRC18-204ENST00000413081 FGD5Q6ZNL6 1462 aa34.61■■■■□ 3.13
TNRC18-204ENST00000413081 CLASP1Q7Z460 1538 aa34.55■■■■□ 3.12
TNRC18-204ENST00000413081 SYNJ1O43426 1573 aa34.54■■■■□ 3.12
TNRC18-204ENST00000413081 CHMP7Q8WUX9 453 aaPredicted RBP34.54■■■■□ 3.12
TNRC18-204ENST00000413081 MAGI1Q96QZ7 1491 aaPredicted RBP34.52■■■■□ 3.12
TNRC18-204ENST00000413081 CUX1P39880 1505 aa34.5■■■■□ 3.11
TNRC18-204ENST00000413081 GRIN2BQ13224 1484 aa34.48■■■■□ 3.11
TNRC18-204ENST00000413081 SYNJ2O15056 1496 aa34.41■■■■□ 3.1
TNRC18-204ENST00000413081 PBRM1Q86U86 1689 aa34.35■■■■□ 3.09
TNRC18-204ENST00000413081 GAPVD1Q14C86 1478 aa34.3■■■■□ 3.08
TNRC18-204ENST00000413081 ABCA10Q8WWZ4 1543 aa34.19■■■■□ 3.06
TNRC18-204ENST00000413081 ABCA5Q8WWZ7 1642 aa34.19■■■■□ 3.06
TNRC18-204ENST00000413081 AEBP2Q6ZN18 517 aaPredicted RBP34.07■■■■□ 3.04
TNRC18-204ENST00000413081 GRIN2AQ12879 1464 aa34.03■■■■□ 3.04
TNRC18-204ENST00000413081 WRNQ14191 1432 aaPredicted RBP eCLIP33.98■■■■□ 3.03
TNRC18-204ENST00000413081 ADAMTS12P58397 1594 aa33.98■■■■□ 3.03
TNRC18-204ENST00000413081 ERCC6L2Q5T890 1561 aa33.96■■■■□ 3.03
TNRC18-204ENST00000413081 SUPT5HO00267 1087 aaKnown RBP33.92■■■■□ 3.02
TNRC18-204ENST00000413081 CEP170Q5SW79 1584 aa33.92■■■■□ 3.02
TNRC18-204ENST00000413081 NUP160Q12769 1436 aa33.9■■■■□ 3.02
TNRC18-204ENST00000413081 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
TNRC18-204ENST00000413081 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
TNRC18-204ENST00000413081 FHAD1B1AJZ9 1412 aa33.85■■■■□ 3.01
TNRC18-204ENST00000413081 SHROOM2Q13796 1616 aa33.82■■■■□ 3
TNRC18-204ENST00000413081 ERICH3Q5RHP9 1530 aa33.77■■■■□ 3
TNRC18-204ENST00000413081 PRG4Q92954 1404 aaPredicted RBP33.64■■■□□ 2.98
TNRC18-204ENST00000413081 KIF13AQ9H1H9 1805 aa33.61■■■□□ 2.97
TNRC18-204ENST00000413081 JPH4Q96JJ6 628 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms