RNA–Protein interactions for RNA: ENST00000412922.6

COPS7B-209, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5

Gene COPS7B, Length 1,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-209ENST00000412922 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
COPS7B-209ENST00000412922 CCDC180Q9P1Z9 1646 aa27.65■■■□□ 2.02
COPS7B-209ENST00000412922 ABCC9O60706 1549 aa27.51■■□□□ 1.99
COPS7B-209ENST00000412922 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
COPS7B-209ENST00000412922 NACADO15069 1562 aa26.1■■□□□ 1.77
COPS7B-209ENST00000412922 MYO15BQ96JP2 1530 aa25.76■■□□□ 1.71
COPS7B-209ENST00000412922 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
COPS7B-209ENST00000412922 DCAF8L2P0C7V8 631 aa25.7■■□□□ 1.7
COPS7B-209ENST00000412922 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
COPS7B-209ENST00000412922 PABPN1Q86U42 306 aaKnown RBP eCLIP25.5■■□□□ 1.67
COPS7B-209ENST00000412922 BICRAQ9NZM4 1560 aa25.45■■□□□ 1.66
COPS7B-209ENST00000412922 ZCCHC6Q5VYS8 1495 aaKnown RBP25.41■■□□□ 1.66
COPS7B-209ENST00000412922 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
COPS7B-209ENST00000412922 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
COPS7B-209ENST00000412922 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
COPS7B-209ENST00000412922 CC2D2AQ9P2K1 1620 aa24.91■■□□□ 1.58
COPS7B-209ENST00000412922 EIF4G1Q04637 1599 aaKnown RBP24.87■■□□□ 1.57
COPS7B-209ENST00000412922 CECR2Q9BXF3 1484 aa24.84■■□□□ 1.57
COPS7B-209ENST00000412922 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
COPS7B-209ENST00000412922 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
COPS7B-209ENST00000412922 SMARCA4P51532 1647 aa23.95■■□□□ 1.42
COPS7B-209ENST00000412922 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
COPS7B-209ENST00000412922 ATAD2BQ9ULI0 1458 aa23.93■■□□□ 1.42
COPS7B-209ENST00000412922 CUX2O14529 1486 aa23.86■■□□□ 1.41
COPS7B-209ENST00000412922 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
COPS7B-209ENST00000412922 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
COPS7B-209ENST00000412922 DNAJC5Q9H3Z4 198 aa23.76■■□□□ 1.39
COPS7B-209ENST00000412922 PEG3Q9GZU2 1588 aa23.75■■□□□ 1.39
COPS7B-209ENST00000412922 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
COPS7B-209ENST00000412922 NESP48681 1621 aa23.59■■□□□ 1.37
COPS7B-209ENST00000412922 LAMC3Q9Y6N6 1575 aa23.58■■□□□ 1.36
COPS7B-209ENST00000412922 MROH2BQ7Z745 1585 aa23.55■■□□□ 1.36
COPS7B-209ENST00000412922 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
COPS7B-209ENST00000412922 KIF21AQ7Z4S6 1674 aa23.39■■□□□ 1.34
COPS7B-209ENST00000412922 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.34
COPS7B-209ENST00000412922 WIZO95785 1651 aa23.29■■□□□ 1.32
COPS7B-209ENST00000412922 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
COPS7B-209ENST00000412922 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
COPS7B-209ENST00000412922 WDR62O43379 1518 aa23.16■■□□□ 1.3
COPS7B-209ENST00000412922 CEP164Q9UPV0 1460 aa23.1■■□□□ 1.29
COPS7B-209ENST00000412922 TOP2AP11388 1531 aaKnown RBP23.06■■□□□ 1.28
COPS7B-209ENST00000412922 RSF1Q96T23 1441 aaPredicted RBP23.04■■□□□ 1.28
COPS7B-209ENST00000412922 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
COPS7B-209ENST00000412922 CFTRP13569 1480 aa23.02■■□□□ 1.28
COPS7B-209ENST00000412922 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
COPS7B-209ENST00000412922 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
COPS7B-209ENST00000412922 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
COPS7B-209ENST00000412922 TRIM41Q8WV44 630 aa22.65■■□□□ 1.22
COPS7B-209ENST00000412922 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
COPS7B-209ENST00000412922 OSCARQ8IYS5 282 aa22.63■■□□□ 1.21
COPS7B-209ENST00000412922 ABCC8Q09428 1581 aa22.61■■□□□ 1.21
COPS7B-209ENST00000412922 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
COPS7B-209ENST00000412922 DNMBPQ6XZF7 1577 aa22.56■■□□□ 1.2
COPS7B-209ENST00000412922 ZNF608Q9ULD9 1512 aaPredicted RBP22.51■■□□□ 1.19
COPS7B-209ENST00000412922 EIF4G3O43432 1585 aaKnown RBP22.5■■□□□ 1.19
COPS7B-209ENST00000412922 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
COPS7B-209ENST00000412922 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
COPS7B-209ENST00000412922 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
COPS7B-209ENST00000412922 TARBP1Q13395 1621 aaKnown RBP22.41■■□□□ 1.18
COPS7B-209ENST00000412922 POLA1P09884 1462 aaPredicted RBP22.35■■□□□ 1.17
COPS7B-209ENST00000412922 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
COPS7B-209ENST00000412922 CHD1O14646 1710 aa22.33■■□□□ 1.17
COPS7B-209ENST00000412922 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
COPS7B-209ENST00000412922 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.162e-6■■■■■ 29.8
COPS7B-209ENST00000412922 SOGA1O94964 1423 aa22.21■■□□□ 1.15
COPS7B-209ENST00000412922 FGD5Q6ZNL6 1462 aa22.2■■□□□ 1.14
COPS7B-209ENST00000412922 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
COPS7B-209ENST00000412922 CUX1P39880 1505 aa22.16■■□□□ 1.14
COPS7B-209ENST00000412922 SNAPC4Q5SXM2 1469 aa22.13■■□□□ 1.13
COPS7B-209ENST00000412922 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
COPS7B-209ENST00000412922 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
COPS7B-209ENST00000412922 FBLN2P98095 1184 aa22.12■■□□□ 1.13
COPS7B-209ENST00000412922 ARAP1Q96P48 1450 aa22.1■■□□□ 1.13
COPS7B-209ENST00000412922 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
COPS7B-209ENST00000412922 GRIN2BQ13224 1484 aa22.08■■□□□ 1.13
COPS7B-209ENST00000412922 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
COPS7B-209ENST00000412922 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
COPS7B-209ENST00000412922 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
COPS7B-209ENST00000412922 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
COPS7B-209ENST00000412922 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
COPS7B-209ENST00000412922 GAPVD1Q14C86 1478 aa21.98■■□□□ 1.11
COPS7B-209ENST00000412922 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
COPS7B-209ENST00000412922 ABCA10Q8WWZ4 1543 aa21.97■■□□□ 1.11
COPS7B-209ENST00000412922 BIVM-ERCC5R4GMW8 1640 aa21.87■■□□□ 1.09
COPS7B-209ENST00000412922 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
COPS7B-209ENST00000412922 TRHP20396 242 aaPredicted RBP21.86■■□□□ 1.09
COPS7B-209ENST00000412922 WRNQ14191 1432 aaPredicted RBP eCLIP21.86■■□□□ 1.09
COPS7B-209ENST00000412922 TOP2BQ02880 1626 aa21.85■■□□□ 1.09
COPS7B-209ENST00000412922 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
COPS7B-209ENST00000412922 GRIN2AQ12879 1464 aa21.8■■□□□ 1.08
COPS7B-209ENST00000412922 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
COPS7B-209ENST00000412922 NUP160Q12769 1436 aa21.73■■□□□ 1.07
COPS7B-209ENST00000412922 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
COPS7B-209ENST00000412922 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
COPS7B-209ENST00000412922 SHROOM2Q13796 1616 aa21.68■■□□□ 1.06
COPS7B-209ENST00000412922 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
COPS7B-209ENST00000412922 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.04
COPS7B-209ENST00000412922 PRG4Q92954 1404 aaPredicted RBP21.48■■□□□ 1.03
COPS7B-209ENST00000412922 CUL7Q14999 1698 aa21.45■■□□□ 1.02
COPS7B-209ENST00000412922 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms