RNA–Protein interactions for RNA: ENST00000412920.7

APBB3-205, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APBB3, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-205ENST00000412920 NISCHQ9Y2I1 1504 aa34.21■■■■□ 3.07
APBB3-205ENST00000412920 ABCC9O60706 1549 aa30.75■■■□□ 2.51
APBB3-205ENST00000412920 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
APBB3-205ENST00000412920 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
APBB3-205ENST00000412920 DCAF8L2P0C7V8 631 aa29.02■■■□□ 2.24
APBB3-205ENST00000412920 NACADO15069 1562 aa28.98■■■□□ 2.23
APBB3-205ENST00000412920 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
APBB3-205ENST00000412920 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
APBB3-205ENST00000412920 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
APBB3-205ENST00000412920 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
APBB3-205ENST00000412920 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
APBB3-205ENST00000412920 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
APBB3-205ENST00000412920 DCAF1Q9Y4B6 1507 aa28.19■■■□□ 2.1
APBB3-205ENST00000412920 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
APBB3-205ENST00000412920 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.05
APBB3-205ENST00000412920 CC2D2AQ9P2K1 1620 aa27.73■■■□□ 2.03
APBB3-205ENST00000412920 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
APBB3-205ENST00000412920 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
APBB3-205ENST00000412920 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
APBB3-205ENST00000412920 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.87
APBB3-205ENST00000412920 SMARCA4P51532 1647 aa26.7■■□□□ 1.86
APBB3-205ENST00000412920 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
APBB3-205ENST00000412920 HMGXB3Q12766 1538 aa26.56■■□□□ 1.84
APBB3-205ENST00000412920 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
APBB3-205ENST00000412920 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
APBB3-205ENST00000412920 BAZ1BQ9UIG0 1483 aaKnown RBP26.48■■□□□ 1.83
APBB3-205ENST00000412920 NESP48681 1621 aa26.41■■□□□ 1.82
APBB3-205ENST00000412920 CUX2O14529 1486 aa26.4■■□□□ 1.82
APBB3-205ENST00000412920 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.82
APBB3-205ENST00000412920 DNAJC5Q9H3Z4 198 aa26.37■■□□□ 1.81
APBB3-205ENST00000412920 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
APBB3-205ENST00000412920 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
APBB3-205ENST00000412920 WIZO95785 1651 aa26.1■■□□□ 1.77
APBB3-205ENST00000412920 THOC2Q8NI27 1593 aaKnown RBP26.09■■□□□ 1.77
APBB3-205ENST00000412920 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
APBB3-205ENST00000412920 PDS5BQ9NTI5 1447 aa26.03■■□□□ 1.76
APBB3-205ENST00000412920 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
APBB3-205ENST00000412920 RSF1Q96T23 1441 aaPredicted RBP25.83■■□□□ 1.73
APBB3-205ENST00000412920 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
APBB3-205ENST00000412920 TOP2AP11388 1531 aaKnown RBP25.74■■□□□ 1.71
APBB3-205ENST00000412920 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
APBB3-205ENST00000412920 WDR62O43379 1518 aa25.73■■□□□ 1.71
APBB3-205ENST00000412920 FANCD2Q9BXW9 1451 aa25.7■■□□□ 1.71
APBB3-205ENST00000412920 CFTRP13569 1480 aa25.66■■□□□ 1.7
APBB3-205ENST00000412920 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
APBB3-205ENST00000412920 CCDC88BA6NC98 1476 aa25.46■■□□□ 1.67
APBB3-205ENST00000412920 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
APBB3-205ENST00000412920 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
APBB3-205ENST00000412920 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
APBB3-205ENST00000412920 TOPBP1Q92547 1522 aa25.21■■□□□ 1.63
APBB3-205ENST00000412920 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
APBB3-205ENST00000412920 IFT140Q96RY7 1462 aa25.19■■□□□ 1.62
APBB3-205ENST00000412920 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
APBB3-205ENST00000412920 ABCC8Q09428 1581 aa25.11■■□□□ 1.61
APBB3-205ENST00000412920 EIF4G3O43432 1585 aaKnown RBP25.04■■□□□ 1.6
APBB3-205ENST00000412920 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
APBB3-205ENST00000412920 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.592e-6■■■■■ 39.8
APBB3-205ENST00000412920 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
APBB3-205ENST00000412920 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
APBB3-205ENST00000412920 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
APBB3-205ENST00000412920 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
APBB3-205ENST00000412920 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
APBB3-205ENST00000412920 FBLN2P98095 1184 aa24.87■■□□□ 1.57
APBB3-205ENST00000412920 CHD1O14646 1710 aa24.87■■□□□ 1.57
APBB3-205ENST00000412920 SOGA1O94964 1423 aa24.86■■□□□ 1.57
APBB3-205ENST00000412920 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
APBB3-205ENST00000412920 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
APBB3-205ENST00000412920 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
APBB3-205ENST00000412920 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
APBB3-205ENST00000412920 CUX1P39880 1505 aa24.8■■□□□ 1.56
APBB3-205ENST00000412920 SNAPC4Q5SXM2 1469 aa24.72■■□□□ 1.55
APBB3-205ENST00000412920 CYB5RLQ6IPT4 315 aa24.7■■□□□ 1.55
APBB3-205ENST00000412920 WDR97A6NE52 1622 aa24.66■■□□□ 1.54
APBB3-205ENST00000412920 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.53
APBB3-205ENST00000412920 GRIN2BQ13224 1484 aa24.62■■□□□ 1.53
APBB3-205ENST00000412920 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
APBB3-205ENST00000412920 MAGI1Q96QZ7 1491 aaPredicted RBP24.6■■□□□ 1.53
APBB3-205ENST00000412920 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
APBB3-205ENST00000412920 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
APBB3-205ENST00000412920 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
APBB3-205ENST00000412920 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
APBB3-205ENST00000412920 CLASP1Q7Z460 1538 aa24.53■■□□□ 1.52
APBB3-205ENST00000412920 ABCA10Q8WWZ4 1543 aa24.49■■□□□ 1.51
APBB3-205ENST00000412920 ABCA5Q8WWZ7 1642 aa24.47■■□□□ 1.51
APBB3-205ENST00000412920 TRHP20396 242 aaPredicted RBP24.46■■□□□ 1.51
APBB3-205ENST00000412920 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
APBB3-205ENST00000412920 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
APBB3-205ENST00000412920 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
APBB3-205ENST00000412920 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
APBB3-205ENST00000412920 ADAMTS12P58397 1594 aa24.3■■□□□ 1.48
APBB3-205ENST00000412920 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
APBB3-205ENST00000412920 FHAD1B1AJZ9 1412 aa24.22■■□□□ 1.47
APBB3-205ENST00000412920 ERCC6L2Q5T890 1561 aa24.21■■□□□ 1.47
APBB3-205ENST00000412920 NUP160Q12769 1436 aa24.19■■□□□ 1.46
APBB3-205ENST00000412920 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
APBB3-205ENST00000412920 SHROOM2Q13796 1616 aa24.08■■□□□ 1.44
APBB3-205ENST00000412920 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
APBB3-205ENST00000412920 JPH4Q96JJ6 628 aa23.99■■□□□ 1.43
APBB3-205ENST00000412920 RUSC2Q8N2Y8 1516 aa23.96■■□□□ 1.43
APBB3-205ENST00000412920 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms