RNA–Protein interactions for RNA: ENST00000412411.1

LARP4B-203, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 3

Gene LARP4B, Length 432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-203ENST00000412411 NISCHQ9Y2I1 1504 aa19.73■□□□□ 0.75
LARP4B-203ENST00000412411 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
LARP4B-203ENST00000412411 ABCC9O60706 1549 aa16.86■□□□□ 0.29
LARP4B-203ENST00000412411 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
LARP4B-203ENST00000412411 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
LARP4B-203ENST00000412411 NACADO15069 1562 aa16.34■□□□□ 0.21
LARP4B-203ENST00000412411 MYO15BQ96JP2 1530 aa16.32■□□□□ 0.2
LARP4B-203ENST00000412411 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
LARP4B-203ENST00000412411 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
LARP4B-203ENST00000412411 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.16
LARP4B-203ENST00000412411 SCRIBQ14160 1630 aa15.95■□□□□ 0.14
LARP4B-203ENST00000412411 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
LARP4B-203ENST00000412411 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
LARP4B-203ENST00000412411 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
LARP4B-203ENST00000412411 EIF4G1Q04637 1599 aaKnown RBP15.39■□□□□ 0.05
LARP4B-203ENST00000412411 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
LARP4B-203ENST00000412411 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
LARP4B-203ENST00000412411 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
LARP4B-203ENST00000412411 CC2D2AQ9P2K1 1620 aa15.28■□□□□ 0.04
LARP4B-203ENST00000412411 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
LARP4B-203ENST00000412411 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
LARP4B-203ENST00000412411 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
LARP4B-203ENST00000412411 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
LARP4B-203ENST00000412411 RSF1Q96T23 1441 aaPredicted RBP15.11■□□□□ 0.01
LARP4B-203ENST00000412411 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
LARP4B-203ENST00000412411 WIZO95785 1651 aa15.09■□□□□ 0.01
LARP4B-203ENST00000412411 NCAPD3P42695 1498 aa15.07■□□□□ 0
LARP4B-203ENST00000412411 HMGXB3Q12766 1538 aa15.03■□□□□ -0
LARP4B-203ENST00000412411 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
LARP4B-203ENST00000412411 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
LARP4B-203ENST00000412411 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
LARP4B-203ENST00000412411 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
LARP4B-203ENST00000412411 NESP48681 1621 aa14.67□□□□□ -0.06
LARP4B-203ENST00000412411 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
LARP4B-203ENST00000412411 CADPSQ9ULU8 1353 aa14.62□□□□□ -0.07
LARP4B-203ENST00000412411 CFTRP13569 1480 aa14.61□□□□□ -0.07
LARP4B-203ENST00000412411 PRDM2Q13029 1718 aa14.57□□□□□ -0.08
LARP4B-203ENST00000412411 KIF21AQ7Z4S6 1674 aa14.53□□□□□ -0.08
LARP4B-203ENST00000412411 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
LARP4B-203ENST00000412411 FANCD2Q9BXW9 1451 aa14.48□□□□□ -0.09
LARP4B-203ENST00000412411 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
LARP4B-203ENST00000412411 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
LARP4B-203ENST00000412411 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
LARP4B-203ENST00000412411 MRC2Q9UBG0 1479 aa14.37□□□□□ -0.11
LARP4B-203ENST00000412411 WDR62O43379 1518 aa14.35□□□□□ -0.11
LARP4B-203ENST00000412411 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
LARP4B-203ENST00000412411 ABCC8Q09428 1581 aa14.28□□□□□ -0.12
LARP4B-203ENST00000412411 DNMBPQ6XZF7 1577 aa14.28□□□□□ -0.12
LARP4B-203ENST00000412411 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
LARP4B-203ENST00000412411 CUX1P39880 1505 aa14.27□□□□□ -0.12
LARP4B-203ENST00000412411 CUX2O14529 1486 aa14.26□□□□□ -0.13
LARP4B-203ENST00000412411 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
LARP4B-203ENST00000412411 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
LARP4B-203ENST00000412411 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
LARP4B-203ENST00000412411 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
LARP4B-203ENST00000412411 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
LARP4B-203ENST00000412411 FGD5Q6ZNL6 1462 aa14.17□□□□□ -0.14
LARP4B-203ENST00000412411 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
LARP4B-203ENST00000412411 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
LARP4B-203ENST00000412411 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
LARP4B-203ENST00000412411 WDR97A6NE52 1622 aa14.1□□□□□ -0.15
LARP4B-203ENST00000412411 SOGA1O94964 1423 aa14.08□□□□□ -0.15
LARP4B-203ENST00000412411 ZNF608Q9ULD9 1512 aaPredicted RBP14.07□□□□□ -0.16
LARP4B-203ENST00000412411 ABCA10Q8WWZ4 1543 aa14.04□□□□□ -0.16
LARP4B-203ENST00000412411 EIF4G3O43432 1585 aaKnown RBP14.04□□□□□ -0.16
LARP4B-203ENST00000412411 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
LARP4B-203ENST00000412411 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.173e-6■■■■□ 24.7
LARP4B-203ENST00000412411 TDRD9Q8NDG6 1382 aaKnown RBP13.99□□□□□ -0.17
LARP4B-203ENST00000412411 CHIC1Q5VXU3 224 aa13.99□□□□□ -0.17
LARP4B-203ENST00000412411 TRIM41Q8WV44 630 aa13.97□□□□□ -0.17
LARP4B-203ENST00000412411 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
LARP4B-203ENST00000412411 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
LARP4B-203ENST00000412411 GRIN2BQ13224 1484 aa13.9□□□□□ -0.18
LARP4B-203ENST00000412411 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
LARP4B-203ENST00000412411 KIF27Q86VH2 1401 aa13.89□□□□□ -0.19
LARP4B-203ENST00000412411 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
LARP4B-203ENST00000412411 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
LARP4B-203ENST00000412411 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
LARP4B-203ENST00000412411 ADAMTS12P58397 1594 aa13.84□□□□□ -0.19
LARP4B-203ENST00000412411 CHD1O14646 1710 aa13.83□□□□□ -0.2
LARP4B-203ENST00000412411 IGF1RP08069 1367 aa13.83□□□□□ -0.2
LARP4B-203ENST00000412411 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
LARP4B-203ENST00000412411 CUL7Q14999 1698 aa13.79□□□□□ -0.2
LARP4B-203ENST00000412411 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
LARP4B-203ENST00000412411 EEA1Q15075 1411 aa13.75□□□□□ -0.21
LARP4B-203ENST00000412411 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
LARP4B-203ENST00000412411 CARMIL1Q5VZK9 1371 aa13.72□□□□□ -0.21
LARP4B-203ENST00000412411 PRXQ9BXM0 1461 aa13.72□□□□□ -0.21
LARP4B-203ENST00000412411 FBLN2P98095 1184 aa13.71□□□□□ -0.21
LARP4B-203ENST00000412411 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
LARP4B-203ENST00000412411 CEP170Q5SW79 1584 aa13.7□□□□□ -0.22
LARP4B-203ENST00000412411 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
LARP4B-203ENST00000412411 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
LARP4B-203ENST00000412411 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
LARP4B-203ENST00000412411 NUP160Q12769 1436 aa13.68□□□□□ -0.22
LARP4B-203ENST00000412411 CLASP1Q7Z460 1538 aa13.68□□□□□ -0.22
LARP4B-203ENST00000412411 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
LARP4B-203ENST00000412411 KIF21BO75037 1637 aa13.65□□□□□ -0.22
LARP4B-203ENST00000412411 CTTNBP2Q8WZ74 1663 aa13.59□□□□□ -0.23
LARP4B-203ENST00000412411 SHROOM2Q13796 1616 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms