RNA–Protein interactions for RNA: ENST00000411727.1

AC109779.1-203, humanhuman

TSL 2 BASIC

Gene AC109779.1, Length 2,100 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109779.1-203ENST00000411727 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
AC109779.1-203ENST00000411727 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
AC109779.1-203ENST00000411727 ZCCHC6Q5VYS8 1495 aaKnown RBP19.08■□□□□ 0.64
AC109779.1-203ENST00000411727 ABCC9O60706 1549 aa18.96■□□□□ 0.63
AC109779.1-203ENST00000411727 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
AC109779.1-203ENST00000411727 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
AC109779.1-203ENST00000411727 SHROOM4Q9ULL8 1493 aa18.63■□□□□ 0.57
AC109779.1-203ENST00000411727 MYO15BQ96JP2 1530 aa18.52■□□□□ 0.55
AC109779.1-203ENST00000411727 NACADO15069 1562 aa18.49■□□□□ 0.55
AC109779.1-203ENST00000411727 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
AC109779.1-203ENST00000411727 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
AC109779.1-203ENST00000411727 UNC13AQ9UPW8 1703 aa18.07■□□□□ 0.48
AC109779.1-203ENST00000411727 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
AC109779.1-203ENST00000411727 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
AC109779.1-203ENST00000411727 BICRAQ9NZM4 1560 aa17.85■□□□□ 0.45
AC109779.1-203ENST00000411727 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
AC109779.1-203ENST00000411727 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
AC109779.1-203ENST00000411727 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
AC109779.1-203ENST00000411727 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
AC109779.1-203ENST00000411727 SMARCA4P51532 1647 aa17.52■□□□□ 0.39
AC109779.1-203ENST00000411727 WIZO95785 1651 aa17.48■□□□□ 0.39
AC109779.1-203ENST00000411727 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
AC109779.1-203ENST00000411727 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
AC109779.1-203ENST00000411727 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
AC109779.1-203ENST00000411727 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
AC109779.1-203ENST00000411727 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
AC109779.1-203ENST00000411727 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
AC109779.1-203ENST00000411727 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
AC109779.1-203ENST00000411727 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.33
AC109779.1-203ENST00000411727 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
AC109779.1-203ENST00000411727 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
AC109779.1-203ENST00000411727 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
AC109779.1-203ENST00000411727 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
AC109779.1-203ENST00000411727 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
AC109779.1-203ENST00000411727 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
AC109779.1-203ENST00000411727 CFTRP13569 1480 aa16.69■□□□□ 0.26
AC109779.1-203ENST00000411727 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
AC109779.1-203ENST00000411727 NESP48681 1621 aa16.62■□□□□ 0.25
AC109779.1-203ENST00000411727 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
AC109779.1-203ENST00000411727 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
AC109779.1-203ENST00000411727 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
AC109779.1-203ENST00000411727 LAMC3Q9Y6N6 1575 aa16.52■□□□□ 0.24
AC109779.1-203ENST00000411727 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.23
AC109779.1-203ENST00000411727 FANCD2Q9BXW9 1451 aa16.49■□□□□ 0.23
AC109779.1-203ENST00000411727 CUX1P39880 1505 aa16.46■□□□□ 0.23
AC109779.1-203ENST00000411727 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
AC109779.1-203ENST00000411727 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
AC109779.1-203ENST00000411727 SOGA1O94964 1423 aa16.41■□□□□ 0.22
AC109779.1-203ENST00000411727 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
AC109779.1-203ENST00000411727 PDS5BQ9NTI5 1447 aa16.4■□□□□ 0.22
AC109779.1-203ENST00000411727 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.22
AC109779.1-203ENST00000411727 LOC105371045A0A1W2PR82 267 aa16.39■□□□□ 0.21
AC109779.1-203ENST00000411727 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
AC109779.1-203ENST00000411727 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
AC109779.1-203ENST00000411727 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
AC109779.1-203ENST00000411727 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
AC109779.1-203ENST00000411727 TOPBP1Q92547 1522 aa16.3■□□□□ 0.2
AC109779.1-203ENST00000411727 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
AC109779.1-203ENST00000411727 EEA1Q15075 1411 aa16.24■□□□□ 0.19
AC109779.1-203ENST00000411727 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
AC109779.1-203ENST00000411727 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
AC109779.1-203ENST00000411727 POLA1P09884 1462 aaPredicted RBP16.22■□□□□ 0.19
AC109779.1-203ENST00000411727 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
AC109779.1-203ENST00000411727 MRC2Q9UBG0 1479 aa16.2■□□□□ 0.18
AC109779.1-203ENST00000411727 CUX2O14529 1486 aa16.18■□□□□ 0.18
AC109779.1-203ENST00000411727 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
AC109779.1-203ENST00000411727 WDR62O43379 1518 aa16.12■□□□□ 0.17
AC109779.1-203ENST00000411727 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
AC109779.1-203ENST00000411727 ABCA10Q8WWZ4 1543 aa16.11■□□□□ 0.17
AC109779.1-203ENST00000411727 WDR97A6NE52 1622 aa16.09■□□□□ 0.17
AC109779.1-203ENST00000411727 KIF21BO75037 1637 aa16.08■□□□□ 0.16
AC109779.1-203ENST00000411727 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
AC109779.1-203ENST00000411727 TARBP1Q13395 1621 aaKnown RBP16.06■□□□□ 0.16
AC109779.1-203ENST00000411727 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
AC109779.1-203ENST00000411727 RAPGEF2Q9Y4G8 1499 aa16.06■□□□□ 0.16
AC109779.1-203ENST00000411727 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
AC109779.1-203ENST00000411727 IGF1RP08069 1367 aa16.03■□□□□ 0.16
AC109779.1-203ENST00000411727 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
AC109779.1-203ENST00000411727 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
AC109779.1-203ENST00000411727 GAPVD1Q14C86 1478 aa15.98■□□□□ 0.15
AC109779.1-203ENST00000411727 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
AC109779.1-203ENST00000411727 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.15
AC109779.1-203ENST00000411727 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
AC109779.1-203ENST00000411727 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
AC109779.1-203ENST00000411727 ZNF608Q9ULD9 1512 aaPredicted RBP15.97■□□□□ 0.15
AC109779.1-203ENST00000411727 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.15
AC109779.1-203ENST00000411727 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
AC109779.1-203ENST00000411727 HRCP23327 699 aa15.95■□□□□ 0.14
AC109779.1-203ENST00000411727 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
AC109779.1-203ENST00000411727 RANGAP1P46060 587 aaPredicted RBP15.93■□□□□ 0.14
AC109779.1-203ENST00000411727 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
AC109779.1-203ENST00000411727 CUL7Q14999 1698 aa15.91■□□□□ 0.14
AC109779.1-203ENST00000411727 EIF4G3O43432 1585 aaKnown RBP15.9■□□□□ 0.14
AC109779.1-203ENST00000411727 GRIN2BQ13224 1484 aa15.85■□□□□ 0.13
AC109779.1-203ENST00000411727 CLIP1P30622 1438 aa15.83■□□□□ 0.12
AC109779.1-203ENST00000411727 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
AC109779.1-203ENST00000411727 ADAMTS12P58397 1594 aa15.81■□□□□ 0.12
AC109779.1-203ENST00000411727 SNAPC4Q5SXM2 1469 aa15.8■□□□□ 0.12
AC109779.1-203ENST00000411727 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
AC109779.1-203ENST00000411727 CTTNBP2Q8WZ74 1663 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms