RNA–Protein interactions for RNA: ENST00000411579.1

MHENCR-201, Transcript of melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489, humanhuman

TSL 2

Gene MHENCR, Length 582 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MHENCR-201ENST00000411579 NISCHQ9Y2I1 1504 aa49.47■■■■■ 5.51
MHENCR-201ENST00000411579 ABCC9O60706 1549 aa44.9■■■■■ 4.78
MHENCR-201ENST00000411579 CCDC180Q9P1Z9 1646 aa44.55■■■■■ 4.72
MHENCR-201ENST00000411579 RB1CC1Q8TDY2 1594 aa42.58■■■■■ 4.41
MHENCR-201ENST00000411579 DNAJC5BQ9UF47 199 aa42.5■■■■■ 4.39
MHENCR-201ENST00000411579 NACADO15069 1562 aa42.21■■■■■ 4.35
MHENCR-201ENST00000411579 DCAF8L2P0C7V8 631 aa41.98■■■■■ 4.31
MHENCR-201ENST00000411579 PABPN1Q86U42 306 aaKnown RBP eCLIP41.78■■■■■ 4.281e-6■■■■■ 36.9
MHENCR-201ENST00000411579 UNC13AQ9UPW8 1703 aa41.7■■■■■ 4.27
MHENCR-201ENST00000411579 MYO15BQ96JP2 1530 aa41.49■■■■■ 4.23
MHENCR-201ENST00000411579 BICRAQ9NZM4 1560 aa41.37■■■■■ 4.21
MHENCR-201ENST00000411579 ZCCHC6Q5VYS8 1495 aaKnown RBP40.88■■■■■ 4.13
MHENCR-201ENST00000411579 DCAF1Q9Y4B6 1507 aa40.83■■■■■ 4.13
MHENCR-201ENST00000411579 SHROOM4Q9ULL8 1493 aa40.71■■■■■ 4.11
MHENCR-201ENST00000411579 SCRIBQ14160 1630 aa40.56■■■■■ 4.08
MHENCR-201ENST00000411579 CC2D2AQ9P2K1 1620 aa40.56■■■■■ 4.08
MHENCR-201ENST00000411579 CECR2Q9BXF3 1484 aa40.48■■■■■ 4.07
MHENCR-201ENST00000411579 EIF4G1Q04637 1599 aaKnown RBP40.36■■■■■ 4.05
MHENCR-201ENST00000411579 DNAJC5Q9H3Z4 198 aa39.29■■■■□ 3.88
MHENCR-201ENST00000411579 NCAPD3P42695 1498 aa38.98■■■■□ 3.83
MHENCR-201ENST00000411579 CUX2O14529 1486 aa38.83■■■■□ 3.81
MHENCR-201ENST00000411579 ATAD2BQ9ULI0 1458 aa38.79■■■■□ 3.8
MHENCR-201ENST00000411579 ERCC6Q03468 1493 aa38.78■■■■□ 3.8
MHENCR-201ENST00000411579 SMARCA4P51532 1647 aa38.67■■■■□ 3.78
MHENCR-201ENST00000411579 SMARCA2P51531 1590 aa38.66■■■■□ 3.78
MHENCR-201ENST00000411579 HMGXB3Q12766 1538 aa38.62■■■■□ 3.77
MHENCR-201ENST00000411579 NESP48681 1621 aa38.48■■■■□ 3.75
MHENCR-201ENST00000411579 BAZ1AQ9NRL2 1556 aaPredicted RBP38.41■■■■□ 3.74
MHENCR-201ENST00000411579 BAZ1BQ9UIG0 1483 aaKnown RBP38.39■■■■□ 3.74
MHENCR-201ENST00000411579 PEG3Q9GZU2 1588 aa38.28■■■■□ 3.72
MHENCR-201ENST00000411579 LAMC3Q9Y6N6 1575 aa38.14■■■■□ 3.7
MHENCR-201ENST00000411579 THOC2Q8NI27 1593 aaKnown RBP38.13■■■■□ 3.69
MHENCR-201ENST00000411579 MROH2BQ7Z745 1585 aa38.12■■■■□ 3.69
MHENCR-201ENST00000411579 KIF21AQ7Z4S6 1674 aa37.99■■■■□ 3.67
MHENCR-201ENST00000411579 PDS5BQ9NTI5 1447 aa37.94■■■■□ 3.66
MHENCR-201ENST00000411579 CADPSQ9ULU8 1353 aa37.77■■■■□ 3.64
MHENCR-201ENST00000411579 WIZO95785 1651 aa37.67■■■■□ 3.62
MHENCR-201ENST00000411579 MRC2Q9UBG0 1479 aa37.61■■■■□ 3.61
MHENCR-201ENST00000411579 WDR62O43379 1518 aa37.53■■■■□ 3.6
MHENCR-201ENST00000411579 CEP164Q9UPV0 1460 aa37.39■■■■□ 3.58
MHENCR-201ENST00000411579 TRIM41Q8WV44 630 aa37.39■■■■□ 3.58
MHENCR-201ENST00000411579 FANCD2Q9BXW9 1451 aa37.33■■■■□ 3.57
MHENCR-201ENST00000411579 CFTRP13569 1480 aa37.26■■■■□ 3.55
MHENCR-201ENST00000411579 RSF1Q96T23 1441 aaPredicted RBP37.19■■■■□ 3.54
MHENCR-201ENST00000411579 TOP2AP11388 1531 aaKnown RBP37.11■■■■□ 3.53
MHENCR-201ENST00000411579 OSCARQ8IYS5 282 aa37.07■■■■□ 3.52
MHENCR-201ENST00000411579 URB2Q14146 1524 aaKnown RBP37.05■■■■□ 3.52
MHENCR-201ENST00000411579 PRDM2Q13029 1718 aa36.9■■■■□ 3.5
MHENCR-201ENST00000411579 CCDC88BA6NC98 1476 aa36.74■■■■□ 3.47
MHENCR-201ENST00000411579 IFT140Q96RY7 1462 aa36.66■■■■□ 3.46
MHENCR-201ENST00000411579 ZNF608Q9ULD9 1512 aaPredicted RBP36.65■■■■□ 3.46
MHENCR-201ENST00000411579 RIMBP3CA6NJZ7 1639 aa36.59■■■■□ 3.45
MHENCR-201ENST00000411579 RIMBP3BA6NNM3 1639 aa36.59■■■■□ 3.45
MHENCR-201ENST00000411579 RIMBP3Q9UFD9 1639 aa36.59■■■■□ 3.45
MHENCR-201ENST00000411579 TOPBP1Q92547 1522 aa36.59■■■■□ 3.45
MHENCR-201ENST00000411579 ABCC8Q09428 1581 aa36.5■■■■□ 3.43
MHENCR-201ENST00000411579 EIF4G3O43432 1585 aaKnown RBP36.41■■■■□ 3.42
MHENCR-201ENST00000411579 DNMBPQ6XZF7 1577 aa36.41■■■■□ 3.42
MHENCR-201ENST00000411579 ARHGEF11O15085 1522 aa36.41■■■■□ 3.42
MHENCR-201ENST00000411579 TARBP1Q13395 1621 aaKnown RBP36.31■■■■□ 3.4
MHENCR-201ENST00000411579 AQRO60306 1485 aaKnown RBP eCLIP36.3■■■■□ 3.43e-7■■■■■ 41.6
MHENCR-201ENST00000411579 CHD1O14646 1710 aa36.28■■■■□ 3.4
MHENCR-201ENST00000411579 SUPT5HO00267 1087 aaKnown RBP36.24■■■■□ 3.39
MHENCR-201ENST00000411579 CYB5RLQ6IPT4 315 aa36.23■■■■□ 3.39
MHENCR-201ENST00000411579 POLA1P09884 1462 aaPredicted RBP36.18■■■■□ 3.38
MHENCR-201ENST00000411579 FBLN2P98095 1184 aa36.15■■■■□ 3.38
MHENCR-201ENST00000411579 RAD54L2Q9Y4B4 1467 aa36.07■■■■□ 3.37
MHENCR-201ENST00000411579 SOGA1O94964 1423 aa36.04■■■■□ 3.36
MHENCR-201ENST00000411579 TDRD9Q8NDG6 1382 aaKnown RBP36.02■■■■□ 3.36
MHENCR-201ENST00000411579 ARAP1Q96P48 1450 aa36.02■■■■□ 3.36
MHENCR-201ENST00000411579 TRHP20396 242 aaPredicted RBP35.93■■■■□ 3.34
MHENCR-201ENST00000411579 FGD5Q6ZNL6 1462 aa35.91■■■■□ 3.34
MHENCR-201ENST00000411579 WDR97A6NE52 1622 aa35.88■■■■□ 3.33
MHENCR-201ENST00000411579 SNAPC4Q5SXM2 1469 aa35.87■■■■□ 3.33
MHENCR-201ENST00000411579 CHMP7Q8WUX9 453 aaPredicted RBP35.83■■■■□ 3.33
MHENCR-201ENST00000411579 CUX1P39880 1505 aa35.83■■■■□ 3.33
MHENCR-201ENST00000411579 CLASP1Q7Z460 1538 aa35.79■■■■□ 3.32
MHENCR-201ENST00000411579 MAGI1Q96QZ7 1491 aaPredicted RBP35.78■■■■□ 3.32
MHENCR-201ENST00000411579 SYNJ1O43426 1573 aa35.75■■■■□ 3.31
MHENCR-201ENST00000411579 GRIN2BQ13224 1484 aa35.74■■■■□ 3.31
MHENCR-201ENST00000411579 SYNJ2O15056 1496 aa35.67■■■■□ 3.3
MHENCR-201ENST00000411579 PBRM1Q86U86 1689 aa35.61■■■■□ 3.29
MHENCR-201ENST00000411579 GAPVD1Q14C86 1478 aa35.59■■■■□ 3.29
MHENCR-201ENST00000411579 ABCA10Q8WWZ4 1543 aa35.47■■■■□ 3.27
MHENCR-201ENST00000411579 ABCA5Q8WWZ7 1642 aa35.46■■■■□ 3.27
MHENCR-201ENST00000411579 GRIN2AQ12879 1464 aa35.29■■■■□ 3.24
MHENCR-201ENST00000411579 WRNQ14191 1432 aaPredicted RBP eCLIP35.28■■■■□ 3.24
MHENCR-201ENST00000411579 ERCC6L2Q5T890 1561 aa35.23■■■■□ 3.23
MHENCR-201ENST00000411579 ADAMTS12P58397 1594 aa35.2■■■■□ 3.23
MHENCR-201ENST00000411579 CEP170Q5SW79 1584 aa35.18■■■■□ 3.22
MHENCR-201ENST00000411579 NUP160Q12769 1436 aa35.17■■■■□ 3.22
MHENCR-201ENST00000411579 TOP2BQ02880 1626 aa35.17■■■■□ 3.22
MHENCR-201ENST00000411579 BIVM-ERCC5R4GMW8 1640 aa35.17■■■■□ 3.22
MHENCR-201ENST00000411579 AEBP2Q6ZN18 517 aaPredicted RBP35.14■■■■□ 3.22
MHENCR-201ENST00000411579 FHAD1B1AJZ9 1412 aa35.11■■■■□ 3.21
MHENCR-201ENST00000411579 SHROOM2Q13796 1616 aa35.09■■■■□ 3.21
MHENCR-201ENST00000411579 ERICH3Q5RHP9 1530 aa35.03■■■■□ 3.2
MHENCR-201ENST00000411579 PRG4Q92954 1404 aaPredicted RBP34.89■■■■□ 3.18
MHENCR-201ENST00000411579 JPH4Q96JJ6 628 aa34.88■■■■□ 3.17
MHENCR-201ENST00000411579 KIF13AQ9H1H9 1805 aa34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms