RNA–Protein interactions for RNA: ENST00000411406.3

TRNAU1AP-202, Transcript of tRNA selenocysteine 1 associated protein 1, humanhuman

TSL 2

Gene TRNAU1AP, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNAU1AP-202ENST00000411406 NISCHQ9Y2I1 1504 aa19.73■□□□□ 0.75
TRNAU1AP-202ENST00000411406 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
TRNAU1AP-202ENST00000411406 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
TRNAU1AP-202ENST00000411406 ZCCHC6Q5VYS8 1495 aaKnown RBP16.53■□□□□ 0.24
TRNAU1AP-202ENST00000411406 ABCC9O60706 1549 aa16.32■□□□□ 0.2
TRNAU1AP-202ENST00000411406 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
TRNAU1AP-202ENST00000411406 MYO15BQ96JP2 1530 aa16.15■□□□□ 0.18
TRNAU1AP-202ENST00000411406 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
TRNAU1AP-202ENST00000411406 NACADO15069 1562 aa16.05■□□□□ 0.16
TRNAU1AP-202ENST00000411406 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
TRNAU1AP-202ENST00000411406 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
TRNAU1AP-202ENST00000411406 SUPT5HO00267 1087 aaKnown RBP15.63■□□□□ 0.09
TRNAU1AP-202ENST00000411406 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
TRNAU1AP-202ENST00000411406 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
TRNAU1AP-202ENST00000411406 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
TRNAU1AP-202ENST00000411406 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
TRNAU1AP-202ENST00000411406 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
TRNAU1AP-202ENST00000411406 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
TRNAU1AP-202ENST00000411406 MROH2BQ7Z745 1585 aa15.21■□□□□ 0.03
TRNAU1AP-202ENST00000411406 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
TRNAU1AP-202ENST00000411406 WIZO95785 1651 aa15.02□□□□□ -0.01
TRNAU1AP-202ENST00000411406 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
TRNAU1AP-202ENST00000411406 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
TRNAU1AP-202ENST00000411406 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
TRNAU1AP-202ENST00000411406 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
TRNAU1AP-202ENST00000411406 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
TRNAU1AP-202ENST00000411406 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
TRNAU1AP-202ENST00000411406 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
TRNAU1AP-202ENST00000411406 NCAPD3P42695 1498 aa14.87□□□□□ -0.03
TRNAU1AP-202ENST00000411406 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
TRNAU1AP-202ENST00000411406 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
TRNAU1AP-202ENST00000411406 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
TRNAU1AP-202ENST00000411406 CC2D2AQ9P2K1 1620 aa14.69□□□□□ -0.06
TRNAU1AP-202ENST00000411406 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.08
TRNAU1AP-202ENST00000411406 CFTRP13569 1480 aa14.5□□□□□ -0.09
TRNAU1AP-202ENST00000411406 WRNQ14191 1432 aaPredicted RBP eCLIP14.47□□□□□ -0.09
TRNAU1AP-202ENST00000411406 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
TRNAU1AP-202ENST00000411406 FAM9AQ8IZU1 332 aaPredicted RBP14.43□□□□□ -0.1
TRNAU1AP-202ENST00000411406 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
TRNAU1AP-202ENST00000411406 LOC105371045A0A1W2PR82 267 aa14.36□□□□□ -0.11
TRNAU1AP-202ENST00000411406 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
TRNAU1AP-202ENST00000411406 EEA1Q15075 1411 aa14.31□□□□□ -0.12
TRNAU1AP-202ENST00000411406 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
TRNAU1AP-202ENST00000411406 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
TRNAU1AP-202ENST00000411406 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
TRNAU1AP-202ENST00000411406 NESP48681 1621 aa14.27□□□□□ -0.12
TRNAU1AP-202ENST00000411406 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
TRNAU1AP-202ENST00000411406 SOGA1O94964 1423 aa14.25□□□□□ -0.13
TRNAU1AP-202ENST00000411406 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
TRNAU1AP-202ENST00000411406 CUX1P39880 1505 aa14.22□□□□□ -0.13
TRNAU1AP-202ENST00000411406 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
TRNAU1AP-202ENST00000411406 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
TRNAU1AP-202ENST00000411406 BIVM-ERCC5R4GMW8 1640 aa14.17□□□□□ -0.14
TRNAU1AP-202ENST00000411406 PRDM2Q13029 1718 aa14.17□□□□□ -0.14
TRNAU1AP-202ENST00000411406 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
TRNAU1AP-202ENST00000411406 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
TRNAU1AP-202ENST00000411406 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
TRNAU1AP-202ENST00000411406 UBTFP17480 764 aaKnown RBP14.14□□□□□ -0.15
TRNAU1AP-202ENST00000411406 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
TRNAU1AP-202ENST00000411406 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
TRNAU1AP-202ENST00000411406 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
TRNAU1AP-202ENST00000411406 CUX2O14529 1486 aa14.06□□□□□ -0.16
TRNAU1AP-202ENST00000411406 URB2Q14146 1524 aaKnown RBP14.06□□□□□ -0.16
TRNAU1AP-202ENST00000411406 ERCC6Q03468 1493 aa14.06□□□□□ -0.16
TRNAU1AP-202ENST00000411406 TNIKQ9UKE5 1360 aa14.05□□□□□ -0.16
TRNAU1AP-202ENST00000411406 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
TRNAU1AP-202ENST00000411406 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
TRNAU1AP-202ENST00000411406 POLA1P09884 1462 aaPredicted RBP14.04□□□□□ -0.16
TRNAU1AP-202ENST00000411406 IGF1RP08069 1367 aa14.03□□□□□ -0.16
TRNAU1AP-202ENST00000411406 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
TRNAU1AP-202ENST00000411406 ABCA10Q8WWZ4 1543 aa14□□□□□ -0.17
TRNAU1AP-202ENST00000411406 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
TRNAU1AP-202ENST00000411406 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
TRNAU1AP-202ENST00000411406 KIF21AQ7Z4S6 1674 aa13.97□□□□□ -0.17
TRNAU1AP-202ENST00000411406 KIF21BO75037 1637 aa13.96□□□□□ -0.17
TRNAU1AP-202ENST00000411406 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
TRNAU1AP-202ENST00000411406 RAPGEF2Q9Y4G8 1499 aa13.94□□□□□ -0.18
TRNAU1AP-202ENST00000411406 CEP162Q5TB80 1403 aa13.91□□□□□ -0.18
TRNAU1AP-202ENST00000411406 ERICH3Q5RHP9 1530 aa13.91□□□□□ -0.18
TRNAU1AP-202ENST00000411406 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
TRNAU1AP-202ENST00000411406 WDR62O43379 1518 aa13.9□□□□□ -0.19
TRNAU1AP-202ENST00000411406 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
TRNAU1AP-202ENST00000411406 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
TRNAU1AP-202ENST00000411406 CLIP1P30622 1438 aa13.86□□□□□ -0.19
TRNAU1AP-202ENST00000411406 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.26e-6■■■■□ 25.1
TRNAU1AP-202ENST00000411406 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
TRNAU1AP-202ENST00000411406 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
TRNAU1AP-202ENST00000411406 APLP2Q06481 763 aa13.78□□□□□ -0.2
TRNAU1AP-202ENST00000411406 THOC2Q8NI27 1593 aaKnown RBP13.78□□□□□ -0.2
TRNAU1AP-202ENST00000411406 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.21
TRNAU1AP-202ENST00000411406 ABCA5Q8WWZ7 1642 aa13.77□□□□□ -0.21
TRNAU1AP-202ENST00000411406 CUL7Q14999 1698 aa13.76□□□□□ -0.21
TRNAU1AP-202ENST00000411406 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
TRNAU1AP-202ENST00000411406 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
TRNAU1AP-202ENST00000411406 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
TRNAU1AP-202ENST00000411406 CHMP7Q8WUX9 453 aaPredicted RBP13.73□□□□□ -0.21
TRNAU1AP-202ENST00000411406 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
TRNAU1AP-202ENST00000411406 VPS8Q8N3P4 1428 aa13.7□□□□□ -0.22
TRNAU1AP-202ENST00000411406 FBLN2P98095 1184 aa13.69□□□□□ -0.22
TRNAU1AP-202ENST00000411406 PPARGC1BQ86YN6 1023 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms