RNA–Protein interactions for RNA: ENST00000411242.1

RN7SKP17-201, Transcript of RNA, 7SK small nuclear pseudogene 17, humanhuman

BASIC

Gene RN7SKP17, Length 351 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP17-201ENST00000411242 NISCHQ9Y2I1 1504 aa11.27□□□□□ -0.61
RN7SKP17-201ENST00000411242 HRCP23327 699 aa9.65□□□□□ -0.86
RN7SKP17-201ENST00000411242 CCDC180Q9P1Z9 1646 aa9.6□□□□□ -0.87
RN7SKP17-201ENST00000411242 ZCCHC6Q5VYS8 1495 aaKnown RBP9.59□□□□□ -0.87
RN7SKP17-201ENST00000411242 SHROOM4Q9ULL8 1493 aa9.56□□□□□ -0.88
RN7SKP17-201ENST00000411242 SUPT5HO00267 1087 aaKnown RBP9.56□□□□□ -0.88
RN7SKP17-201ENST00000411242 PELP1Q8IZL8 1130 aaKnown RBP9.53□□□□□ -0.88
RN7SKP17-201ENST00000411242 DCAF1Q9Y4B6 1507 aa9.48□□□□□ -0.89
RN7SKP17-201ENST00000411242 CHIC1Q5VXU3 224 aa9.45□□□□□ -0.9
RN7SKP17-201ENST00000411242 ZEB1P37275 1124 aaPredicted RBP9.43□□□□□ -0.9
RN7SKP17-201ENST00000411242 PCGF6Q9BYE7 350 aa9.37□□□□□ -0.91
RN7SKP17-201ENST00000411242 TRIM26Q12899 539 aaPredicted RBP9.33□□□□□ -0.92
RN7SKP17-201ENST00000411242 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
RN7SKP17-201ENST00000411242 MYT1Q01538 1121 aa9.29□□□□□ -0.92
RN7SKP17-201ENST00000411242 DCAF8L2P0C7V8 631 aa9.15□□□□□ -0.94
RN7SKP17-201ENST00000411242 PPARGC1BQ86YN6 1023 aaKnown RBP9.12□□□□□ -0.95
RN7SKP17-201ENST00000411242 ABCC9O60706 1549 aa9.1□□□□□ -0.95
RN7SKP17-201ENST00000411242 LOC105371045A0A1W2PR82 267 aa9.04□□□□□ -0.96
RN7SKP17-201ENST00000411242 CENPBP07199 599 aaPredicted RBP9.03□□□□□ -0.96
RN7SKP17-201ENST00000411242 TRIM41Q8WV44 630 aa9.03□□□□□ -0.96
RN7SKP17-201ENST00000411242 RB1CC1Q8TDY2 1594 aa9□□□□□ -0.97
RN7SKP17-201ENST00000411242 RSF1Q96T23 1441 aaPredicted RBP8.96□□□□□ -0.98
RN7SKP17-201ENST00000411242 SCAF1Q9H7N4 1312 aaKnown RBP8.9□□□□□ -0.98
RN7SKP17-201ENST00000411242 ACIN1Q9UKV3 1341 aaKnown RBP8.9□□□□□ -0.98
RN7SKP17-201ENST00000411242 CCER1Q8TC90 406 aaPredicted RBP8.87□□□□□ -0.99
RN7SKP17-201ENST00000411242 SCRIBQ14160 1630 aa8.83□□□□□ -1
RN7SKP17-201ENST00000411242 NACADO15069 1562 aa8.83□□□□□ -1
RN7SKP17-201ENST00000411242 CLSPNQ9HAW4 1339 aa8.82□□□□□ -1
RN7SKP17-201ENST00000411242 DIEXFQ68CQ4 756 aaKnown RBP8.81□□□□□ -1
RN7SKP17-201ENST00000411242 WRNQ14191 1432 aaPredicted RBP eCLIP8.8□□□□□ -1
RN7SKP17-201ENST00000411242 EEA1Q15075 1411 aa8.8□□□□□ -1
RN7SKP17-201ENST00000411242 FAM9AQ8IZU1 332 aaPredicted RBP8.77□□□□□ -1.01
RN7SKP17-201ENST00000411242 BAZ1AQ9NRL2 1556 aaPredicted RBP8.73□□□□□ -1.01
RN7SKP17-201ENST00000411242 GTF3C3Q9Y5Q9 886 aa8.73□□□□□ -1.01
RN7SKP17-201ENST00000411242 ZNF316A6NFI3 1004 aaPredicted RBP8.72□□□□□ -1.01
RN7SKP17-201ENST00000411242 NEUROD1Q13562 356 aa8.72□□□□□ -1.01
RN7SKP17-201ENST00000411242 TNIKQ9UKE5 1360 aa8.71□□□□□ -1.02
RN7SKP17-201ENST00000411242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.69□□□□□ -1.02
RN7SKP17-201ENST00000411242 TTBK1Q5TCY1 1321 aaPredicted RBP8.69□□□□□ -1.02
RN7SKP17-201ENST00000411242 MROH2BQ7Z745 1585 aa8.67□□□□□ -1.02
RN7SKP17-201ENST00000411242 CEP162Q5TB80 1403 aa8.66□□□□□ -1.02
RN7SKP17-201ENST00000411242 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
RN7SKP17-201ENST00000411242 EIF4G1Q04637 1599 aaKnown RBP8.64□□□□□ -1.03
RN7SKP17-201ENST00000411242 GOLGA3Q08378 1498 aa8.64□□□□□ -1.03
RN7SKP17-201ENST00000411242 WIZO95785 1651 aa8.62□□□□□ -1.03
RN7SKP17-201ENST00000411242 APLP2Q06481 763 aa8.61□□□□□ -1.03
RN7SKP17-201ENST00000411242 CECR2Q9BXF3 1484 aa8.61□□□□□ -1.03
RN7SKP17-201ENST00000411242 UNC13AQ9UPW8 1703 aa8.6□□□□□ -1.03
RN7SKP17-201ENST00000411242 CSRNP3Q8WYN3 585 aa8.59□□□□□ -1.03
RN7SKP17-201ENST00000411242 DNAJC5BQ9UF47 199 aa8.59□□□□□ -1.03
RN7SKP17-201ENST00000411242 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
RN7SKP17-201ENST00000411242 EHMT2Q96KQ7 1210 aa8.57□□□□□ -1.04
RN7SKP17-201ENST00000411242 UBTFP17480 764 aaKnown RBP8.56□□□□□ -1.04
RN7SKP17-201ENST00000411242 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
RN7SKP17-201ENST00000411242 KIF21BO75037 1637 aa8.54□□□□□ -1.04
RN7SKP17-201ENST00000411242 SMARCA4P51532 1647 aa8.53□□□□□ -1.04
RN7SKP17-201ENST00000411242 CCDC88BA6NC98 1476 aa8.52□□□□□ -1.05
RN7SKP17-201ENST00000411242 SMARCA2P51531 1590 aa8.52□□□□□ -1.05
RN7SKP17-201ENST00000411242 VPS8Q8N3P4 1428 aa8.5□□□□□ -1.05
RN7SKP17-201ENST00000411242 YTHDC1Q96MU7 727 aaKnown RBP8.49□□□□□ -1.05
RN7SKP17-201ENST00000411242 CLIP1P30622 1438 aa8.48□□□□□ -1.05
RN7SKP17-201ENST00000411242 MIER1Q8N108 512 aa8.47□□□□□ -1.05
RN7SKP17-201ENST00000411242 ABCC8Q09428 1581 aa8.47□□□□□ -1.05
RN7SKP17-201ENST00000411242 SOGA1O94964 1423 aa8.46□□□□□ -1.05
RN7SKP17-201ENST00000411242 BICRAQ9NZM4 1560 aa8.44□□□□□ -1.06
RN7SKP17-201ENST00000411242 HNRNPUL2Q1KMD3 747 aaKnown RBP8.42□□□□□ -1.06
RN7SKP17-201ENST00000411242 PEG3Q9GZU2 1588 aa8.42□□□□□ -1.06
RN7SKP17-201ENST00000411242 ERICH3Q5RHP9 1530 aa8.39□□□□□ -1.07
RN7SKP17-201ENST00000411242 NEFLP07196 543 aa8.38□□□□□ -1.07
RN7SKP17-201ENST00000411242 ANP32EQ9BTT0 268 aa8.38□□□□□ -1.07
RN7SKP17-201ENST00000411242 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
RN7SKP17-201ENST00000411242 SUPT16HQ9Y5B9 1047 aaKnown RBP8.37□□□□□ -1.07
RN7SKP17-201ENST00000411242 CUX2O14529 1486 aa8.35□□□□□ -1.07
RN7SKP17-201ENST00000411242 MYT1LQ9UL68 1186 aa8.35□□□□□ -1.07
RN7SKP17-201ENST00000411242 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
RN7SKP17-201ENST00000411242 RRBP1Q9P2E9 1410 aaKnown RBP8.33□□□□□ -1.08
RN7SKP17-201ENST00000411242 RUSC2Q8N2Y8 1516 aa8.33□□□□□ -1.08
RN7SKP17-201ENST00000411242 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
RN7SKP17-201ENST00000411242 TOP2BQ02880 1626 aa8.31□□□□□ -1.08
RN7SKP17-201ENST00000411242 MAP3K1Q13233 1512 aa8.3□□□□□ -1.08
RN7SKP17-201ENST00000411242 CCNB3Q8WWL7 1395 aa8.29□□□□□ -1.08
RN7SKP17-201ENST00000411242 BIVM-ERCC5R4GMW8 1640 aa8.29□□□□□ -1.08
RN7SKP17-201ENST00000411242 RAPGEF2Q9Y4G8 1499 aa8.28□□□□□ -1.08
RN7SKP17-201ENST00000411242 CCER2I3L3R5 266 aa8.28□□□□□ -1.08
RN7SKP17-201ENST00000411242 TSHZ2Q9NRE2 1034 aa8.28□□□□□ -1.08
RN7SKP17-201ENST00000411242 PRXQ9BXM0 1461 aa8.27□□□□□ -1.09
RN7SKP17-201ENST00000411242 KIF27Q86VH2 1401 aa8.26□□□□□ -1.09
RN7SKP17-201ENST00000411242 ERICH6BQ5W0A0 696 aa8.25□□□□□ -1.09
RN7SKP17-201ENST00000411242 PABPN1Q86U42 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
RN7SKP17-201ENST00000411242 ATAD2BQ9ULI0 1458 aa8.25□□□□□ -1.09
RN7SKP17-201ENST00000411242 CC2D2AQ9P2K1 1620 aa8.25□□□□□ -1.09
RN7SKP17-201ENST00000411242 ARAP1Q96P48 1450 aa8.24□□□□□ -1.09
RN7SKP17-201ENST00000411242 ANP32CO43423 234 aa8.23□□□□□ -1.09
RN7SKP17-201ENST00000411242 ERICH6Q7L0X2 663 aa8.23□□□□□ -1.09
RN7SKP17-201ENST00000411242 SETD5Q9C0A6 1442 aa8.22□□□□□ -1.09
RN7SKP17-201ENST00000411242 FHAD1B1AJZ9 1412 aa8.21□□□□□ -1.09
RN7SKP17-201ENST00000411242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.2□□□□□ -1.1
RN7SKP17-201ENST00000411242 FKBP8Q14318 412 aa8.19□□□□□ -1.1
RN7SKP17-201ENST00000411242 CDK11AQ9UQ88 783 aaPredicted RBP8.18□□□□□ -1.1
RN7SKP17-201ENST00000411242 FANCIQ9NVI1 1328 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms