RNA–Protein interactions for RNA: ENST00000410349.1

RN7SKP111-201, Transcript of RNA, 7SK small nuclear pseudogene 111, humanhuman

BASIC

Gene RN7SKP111, Length 271 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP111-201ENST00000410349 AEBP2Q6ZN18 517 aaPredicted RBP9.79□□□□□ -0.84
RN7SKP111-201ENST00000410349 CHIC1Q5VXU3 224 aa9.24□□□□□ -0.93
RN7SKP111-201ENST00000410349 SENP3Q9H4L4 574 aaPredicted RBP8.49□□□□□ -1.05
RN7SKP111-201ENST00000410349 NISCHQ9Y2I1 1504 aa8.42□□□□□ -1.06
RN7SKP111-201ENST00000410349 PHF23Q9BUL5 403 aaPredicted RBP8.29□□□□□ -1.08
RN7SKP111-201ENST00000410349 FOXD1Q16676 465 aa7.89□□□□□ -1.15
RN7SKP111-201ENST00000410349 POTEDQ86YR6 584 aa7.81□□□□□ -1.16
RN7SKP111-201ENST00000410349 MSH5O43196 834 aa7.57□□□□□ -1.2
RN7SKP111-201ENST00000410349 CCDC180Q9P1Z9 1646 aa7.54□□□□□ -1.2
RN7SKP111-201ENST00000410349 PIAS4Q8N2W9 510 aaPredicted RBP7.31□□□□□ -1.24
RN7SKP111-201ENST00000410349 MYO15BQ96JP2 1530 aa7.23□□□□□ -1.25
RN7SKP111-201ENST00000410349 DCAF1Q9Y4B6 1507 aa7.17□□□□□ -1.26
RN7SKP111-201ENST00000410349 PLPPR3Q6T4P5 718 aa7.15□□□□□ -1.26
RN7SKP111-201ENST00000410349 PPP6R1Q9UPN7 881 aa7.12□□□□□ -1.27
RN7SKP111-201ENST00000410349 ADRA2BP18089 450 aa7.08□□□□□ -1.28
RN7SKP111-201ENST00000410349 NACADO15069 1562 aa7.07□□□□□ -1.28
RN7SKP111-201ENST00000410349 ZCCHC6Q5VYS8 1495 aaKnown RBP7.05□□□□□ -1.28
RN7SKP111-201ENST00000410349 ABCC9O60706 1549 aa6.98□□□□□ -1.29
RN7SKP111-201ENST00000410349 RB1CC1Q8TDY2 1594 aa6.98□□□□□ -1.29
RN7SKP111-201ENST00000410349 SHROOM4Q9ULL8 1493 aa6.96□□□□□ -1.3
RN7SKP111-201ENST00000410349 BICRAQ9NZM4 1560 aa6.73□□□□□ -1.33
RN7SKP111-201ENST00000410349 UNC13AQ9UPW8 1703 aa6.7□□□□□ -1.34
RN7SKP111-201ENST00000410349 DMRT2Q9Y5R5 561 aa6.67□□□□□ -1.34
RN7SKP111-201ENST00000410349 CACNB1Q02641 598 aaPredicted RBP6.62□□□□□ -1.35
RN7SKP111-201ENST00000410349 SCAF1Q9H7N4 1312 aaKnown RBP6.6□□□□□ -1.35
RN7SKP111-201ENST00000410349 DCAF8L2P0C7V8 631 aa6.6□□□□□ -1.35
RN7SKP111-201ENST00000410349 SCRIBQ14160 1630 aa6.59□□□□□ -1.35
RN7SKP111-201ENST00000410349 PEG3Q9GZU2 1588 aa6.59□□□□□ -1.35
RN7SKP111-201ENST00000410349 MAPK8IP2Q13387 824 aaPredicted RBP6.57□□□□□ -1.36
RN7SKP111-201ENST00000410349 BAZ1AQ9NRL2 1556 aaPredicted RBP6.55□□□□□ -1.36
RN7SKP111-201ENST00000410349 EIF4G1Q04637 1599 aaKnown RBP6.53□□□□□ -1.36
RN7SKP111-201ENST00000410349 NCAPD3P42695 1498 aa6.53□□□□□ -1.36
RN7SKP111-201ENST00000410349 HMGXB3Q12766 1538 aa6.5□□□□□ -1.37
RN7SKP111-201ENST00000410349 SMARCA2P51531 1590 aa6.5□□□□□ -1.37
RN7SKP111-201ENST00000410349 SMARCA4P51532 1647 aa6.47□□□□□ -1.37
RN7SKP111-201ENST00000410349 PABPN1Q86U42 306 aaKnown RBP eCLIP6.46□□□□□ -1.38
RN7SKP111-201ENST00000410349 ATAD2BQ9ULI0 1458 aa6.44□□□□□ -1.38
RN7SKP111-201ENST00000410349 CC2D2AQ9P2K1 1620 aa6.43□□□□□ -1.38
RN7SKP111-201ENST00000410349 RSF1Q96T23 1441 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP111-201ENST00000410349 CECR2Q9BXF3 1484 aa6.41□□□□□ -1.38
RN7SKP111-201ENST00000410349 RNF39Q9H2S5 420 aa6.4□□□□□ -1.38
RN7SKP111-201ENST00000410349 MROH2BQ7Z745 1585 aa6.39□□□□□ -1.39
RN7SKP111-201ENST00000410349 DCAF8L1A6NGE4 600 aa6.35□□□□□ -1.39
RN7SKP111-201ENST00000410349 TOP2AP11388 1531 aaKnown RBP6.35□□□□□ -1.39
RN7SKP111-201ENST00000410349 BAZ1BQ9UIG0 1483 aaKnown RBP6.34□□□□□ -1.39
RN7SKP111-201ENST00000410349 HOXD11P31277 338 aaPredicted RBP6.33□□□□□ -1.4
RN7SKP111-201ENST00000410349 C1QBPQ07021 282 aaKnown RBP6.33□□□□□ -1.4
RN7SKP111-201ENST00000410349 DNAJC5BQ9UF47 199 aa6.32□□□□□ -1.4
RN7SKP111-201ENST00000410349 LAMC3Q9Y6N6 1575 aa6.31□□□□□ -1.4
RN7SKP111-201ENST00000410349 CFTRP13569 1480 aa6.28□□□□□ -1.4
RN7SKP111-201ENST00000410349 WIZO95785 1651 aa6.26□□□□□ -1.41
RN7SKP111-201ENST00000410349 CADPSQ9ULU8 1353 aa6.26□□□□□ -1.41
RN7SKP111-201ENST00000410349 PDS5BQ9NTI5 1447 aa6.23□□□□□ -1.41
RN7SKP111-201ENST00000410349 ABCC8Q09428 1581 aa6.22□□□□□ -1.41
RN7SKP111-201ENST00000410349 RNF216Q9NWF9 866 aaPredicted RBP6.21□□□□□ -1.42
RN7SKP111-201ENST00000410349 PRDM2Q13029 1718 aa6.21□□□□□ -1.42
RN7SKP111-201ENST00000410349 CCDC88BA6NC98 1476 aa6.2□□□□□ -1.42
RN7SKP111-201ENST00000410349 PPP4R3CPQ6ZMV5 832 aa6.19□□□□□ -1.42
RN7SKP111-201ENST00000410349 CNKSR2Q8WXI2 1034 aa6.18□□□□□ -1.42
RN7SKP111-201ENST00000410349 CUX2O14529 1486 aa6.17□□□□□ -1.42
RN7SKP111-201ENST00000410349 WDR97A6NE52 1622 aa6.16□□□□□ -1.42
RN7SKP111-201ENST00000410349 WDR62O43379 1518 aa6.14□□□□□ -1.43
RN7SKP111-201ENST00000410349 FANCD2Q9BXW9 1451 aa6.12□□□□□ -1.43
RN7SKP111-201ENST00000410349 CEP164Q9UPV0 1460 aa6.12□□□□□ -1.43
RN7SKP111-201ENST00000410349 THOC2Q8NI27 1593 aaKnown RBP6.11□□□□□ -1.43
RN7SKP111-201ENST00000410349 MRC2Q9UBG0 1479 aa6.11□□□□□ -1.43
RN7SKP111-201ENST00000410349 DNMBPQ6XZF7 1577 aa6.08□□□□□ -1.44
RN7SKP111-201ENST00000410349 NESP48681 1621 aa6.07□□□□□ -1.44
RN7SKP111-201ENST00000410349 POTEHQ6S545 545 aa6.07□□□□□ -1.44
RN7SKP111-201ENST00000410349 KIF21AQ7Z4S6 1674 aa6.05□□□□□ -1.44
RN7SKP111-201ENST00000410349 ERCC6Q03468 1493 aa6.05□□□□□ -1.44
RN7SKP111-201ENST00000410349 TOP2BQ02880 1626 aa6.05□□□□□ -1.44
RN7SKP111-201ENST00000410349 BIVM-ERCC5R4GMW8 1640 aa6.05□□□□□ -1.44
RN7SKP111-201ENST00000410349 TOPBP1Q92547 1522 aa6.04□□□□□ -1.44
RN7SKP111-201ENST00000410349 IFT140Q96RY7 1462 aa6.04□□□□□ -1.44
RN7SKP111-201ENST00000410349 URB2Q14146 1524 aaKnown RBP6.04□□□□□ -1.44
RN7SKP111-201ENST00000410349 WRNQ14191 1432 aaPredicted RBP eCLIP6.02□□□□□ -1.45
RN7SKP111-201ENST00000410349 ABCA10Q8WWZ4 1543 aa6.02□□□□□ -1.45
RN7SKP111-201ENST00000410349 CUX1P39880 1505 aa6□□□□□ -1.45
RN7SKP111-201ENST00000410349 TARBP1Q13395 1621 aaKnown RBP6□□□□□ -1.45
RN7SKP111-201ENST00000410349 SUPT5HO00267 1087 aaKnown RBP6□□□□□ -1.45
RN7SKP111-201ENST00000410349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6□□□□□ -1.45
RN7SKP111-201ENST00000410349 POLA1P09884 1462 aaPredicted RBP6□□□□□ -1.45
RN7SKP111-201ENST00000410349 EEA1Q15075 1411 aa5.98□□□□□ -1.45
RN7SKP111-201ENST00000410349 ERICH3Q5RHP9 1530 aa5.97□□□□□ -1.45
RN7SKP111-201ENST00000410349 MAGI1Q96QZ7 1491 aaPredicted RBP5.96□□□□□ -1.45
RN7SKP111-201ENST00000410349 FGD5Q6ZNL6 1462 aa5.96□□□□□ -1.46
RN7SKP111-201ENST00000410349 SOGA1O94964 1423 aa5.95□□□□□ -1.46
RN7SKP111-201ENST00000410349 ABCA5Q8WWZ7 1642 aa5.95□□□□□ -1.46
RN7SKP111-201ENST00000410349 SYNJ1O43426 1573 aa5.93□□□□□ -1.46
RN7SKP111-201ENST00000410349 NCBP3Q53F19 620 aaKnown RBP5.93□□□□□ -1.46
RN7SKP111-201ENST00000410349 GRIN2BQ13224 1484 aa5.93□□□□□ -1.46
RN7SKP111-201ENST00000410349 KIF27Q86VH2 1401 aa5.91□□□□□ -1.46
RN7SKP111-201ENST00000410349 GAPVD1Q14C86 1478 aa5.9□□□□□ -1.46
RN7SKP111-201ENST00000410349 CUL7Q14999 1698 aa5.9□□□□□ -1.47
RN7SKP111-201ENST00000410349 FHAD1B1AJZ9 1412 aa5.9□□□□□ -1.47
RN7SKP111-201ENST00000410349 SYNJ2O15056 1496 aa5.9□□□□□ -1.47
RN7SKP111-201ENST00000410349 EIF4G3O43432 1585 aaKnown RBP5.89□□□□□ -1.47
RN7SKP111-201ENST00000410349 DSG3P32926 999 aa5.88□□□□□ -1.47
RN7SKP111-201ENST00000410349 NUP160Q12769 1436 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms