RNA–Protein interactions for RNA: ENST00000410049.1

C2orf49-202, Transcript of chromosome 2 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C2orf49, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf49-202ENST00000410049 NISCHQ9Y2I1 1504 aa42.85■■■■■ 4.45
C2orf49-202ENST00000410049 CCDC180Q9P1Z9 1646 aa38.54■■■■□ 3.76
C2orf49-202ENST00000410049 ABCC9O60706 1549 aa38.52■■■■□ 3.76
C2orf49-202ENST00000410049 RB1CC1Q8TDY2 1594 aa36.7■■■■□ 3.47
C2orf49-202ENST00000410049 NACADO15069 1562 aa36.45■■■■□ 3.43
C2orf49-202ENST00000410049 DNAJC5BQ9UF47 199 aa36.28■■■■□ 3.4
C2orf49-202ENST00000410049 DCAF8L2P0C7V8 631 aa36.1■■■■□ 3.37
C2orf49-202ENST00000410049 MYO15BQ96JP2 1530 aa35.98■■■■□ 3.35
C2orf49-202ENST00000410049 UNC13AQ9UPW8 1703 aa35.94■■■■□ 3.34
C2orf49-202ENST00000410049 PABPN1Q86U42 306 aaKnown RBP eCLIP35.83■■■■□ 3.33
C2orf49-202ENST00000410049 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
C2orf49-202ENST00000410049 ZCCHC6Q5VYS8 1495 aaKnown RBP35.47■■■■□ 3.27
C2orf49-202ENST00000410049 DCAF1Q9Y4B6 1507 aa35.46■■■■□ 3.27
C2orf49-202ENST00000410049 SHROOM4Q9ULL8 1493 aa35.2■■■■□ 3.23
C2orf49-202ENST00000410049 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
C2orf49-202ENST00000410049 CC2D2AQ9P2K1 1620 aa34.85■■■■□ 3.17
C2orf49-202ENST00000410049 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
C2orf49-202ENST00000410049 CECR2Q9BXF3 1484 aa34.74■■■■□ 3.15
C2orf49-202ENST00000410049 NCAPD3P42695 1498 aa33.66■■■□□ 2.98
C2orf49-202ENST00000410049 ATAD2BQ9ULI0 1458 aa33.5■■■□□ 2.95
C2orf49-202ENST00000410049 SMARCA4P51532 1647 aa33.44■■■□□ 2.94
C2orf49-202ENST00000410049 DNAJC5Q9H3Z4 198 aa33.44■■■□□ 2.94
C2orf49-202ENST00000410049 SMARCA2P51531 1590 aa33.41■■■□□ 2.94
C2orf49-202ENST00000410049 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
C2orf49-202ENST00000410049 CUX2O14529 1486 aa33.32■■■□□ 2.92
C2orf49-202ENST00000410049 BAZ1AQ9NRL2 1556 aaPredicted RBP33.27■■■□□ 2.92
C2orf49-202ENST00000410049 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
C2orf49-202ENST00000410049 PEG3Q9GZU2 1588 aa33.18■■■□□ 2.9
C2orf49-202ENST00000410049 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
C2orf49-202ENST00000410049 NESP48681 1621 aa33.07■■■□□ 2.88
C2orf49-202ENST00000410049 MROH2BQ7Z745 1585 aa32.98■■■□□ 2.87
C2orf49-202ENST00000410049 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
C2orf49-202ENST00000410049 THOC2Q8NI27 1593 aaKnown RBP32.8■■■□□ 2.84
C2orf49-202ENST00000410049 PDS5BQ9NTI5 1447 aa32.7■■■□□ 2.83
C2orf49-202ENST00000410049 KIF21AQ7Z4S6 1674 aa32.7■■■□□ 2.83
C2orf49-202ENST00000410049 CADPSQ9ULU8 1353 aa32.6■■■□□ 2.81
C2orf49-202ENST00000410049 WIZO95785 1651 aa32.59■■■□□ 2.81
C2orf49-202ENST00000410049 MRC2Q9UBG0 1479 aa32.39■■■□□ 2.78
C2orf49-202ENST00000410049 WDR62O43379 1518 aa32.33■■■□□ 2.77
C2orf49-202ENST00000410049 RSF1Q96T23 1441 aaPredicted RBP32.27■■■□□ 2.76
C2orf49-202ENST00000410049 CEP164Q9UPV0 1460 aa32.23■■■□□ 2.75
C2orf49-202ENST00000410049 CFTRP13569 1480 aa32.22■■■□□ 2.75
C2orf49-202ENST00000410049 FANCD2Q9BXW9 1451 aa32.19■■■□□ 2.74
C2orf49-202ENST00000410049 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
C2orf49-202ENST00000410049 PRDM2Q13029 1718 aa31.95■■■□□ 2.71
C2orf49-202ENST00000410049 URB2Q14146 1524 aaKnown RBP31.94■■■□□ 2.7
C2orf49-202ENST00000410049 CCDC88BA6NC98 1476 aa31.82■■■□□ 2.68
C2orf49-202ENST00000410049 TRIM41Q8WV44 630 aa31.8■■■□□ 2.68
C2orf49-202ENST00000410049 OSCARQ8IYS5 282 aa31.79■■■□□ 2.68
C2orf49-202ENST00000410049 IFT140Q96RY7 1462 aa31.61■■■□□ 2.65
C2orf49-202ENST00000410049 ABCC8Q09428 1581 aa31.58■■■□□ 2.65
C2orf49-202ENST00000410049 TOPBP1Q92547 1522 aa31.58■■■□□ 2.65
C2orf49-202ENST00000410049 ZNF608Q9ULD9 1512 aaPredicted RBP31.54■■■□□ 2.64
C2orf49-202ENST00000410049 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
C2orf49-202ENST00000410049 EIF4G3O43432 1585 aaKnown RBP31.37■■■□□ 2.61
C2orf49-202ENST00000410049 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
C2orf49-202ENST00000410049 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
C2orf49-202ENST00000410049 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
C2orf49-202ENST00000410049 TARBP1Q13395 1621 aaKnown RBP31.35■■■□□ 2.61
C2orf49-202ENST00000410049 AQRO60306 1485 aaKnown RBP eCLIP31.26■■■□□ 2.59
C2orf49-202ENST00000410049 POLA1P09884 1462 aaPredicted RBP31.25■■■□□ 2.59
C2orf49-202ENST00000410049 ARHGEF11O15085 1522 aa31.24■■■□□ 2.59
C2orf49-202ENST00000410049 CHD1O14646 1710 aa31.2■■■□□ 2.58
C2orf49-202ENST00000410049 SOGA1O94964 1423 aa31.11■■■□□ 2.57
C2orf49-202ENST00000410049 RAD54L2Q9Y4B4 1467 aa31.11■■■□□ 2.57
C2orf49-202ENST00000410049 WDR97A6NE52 1622 aa31.07■■■□□ 2.56
C2orf49-202ENST00000410049 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
C2orf49-202ENST00000410049 FBLN2P98095 1184 aa31.02■■■□□ 2.56
C2orf49-202ENST00000410049 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.56
C2orf49-202ENST00000410049 CYB5RLQ6IPT4 315 aa30.99■■■□□ 2.55
C2orf49-202ENST00000410049 CUX1P39880 1505 aa30.98■■■□□ 2.55
C2orf49-202ENST00000410049 ARAP1Q96P48 1450 aa30.91■■■□□ 2.54
C2orf49-202ENST00000410049 SNAPC4Q5SXM2 1469 aa30.9■■■□□ 2.54
C2orf49-202ENST00000410049 MAGI1Q96QZ7 1491 aaPredicted RBP30.88■■■□□ 2.53
C2orf49-202ENST00000410049 GRIN2BQ13224 1484 aa30.86■■■□□ 2.53
C2orf49-202ENST00000410049 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
C2orf49-202ENST00000410049 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
C2orf49-202ENST00000410049 SYNJ1O43426 1573 aa30.8■■■□□ 2.52
C2orf49-202ENST00000410049 SYNJ2O15056 1496 aa30.76■■■□□ 2.52
C2orf49-202ENST00000410049 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
C2orf49-202ENST00000410049 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
C2orf49-202ENST00000410049 ABCA10Q8WWZ4 1543 aa30.72■■■□□ 2.51
C2orf49-202ENST00000410049 SUPT5HO00267 1087 aaKnown RBP30.67■■■□□ 2.5
C2orf49-202ENST00000410049 ABCA5Q8WWZ7 1642 aa30.66■■■□□ 2.5
C2orf49-202ENST00000410049 TRHP20396 242 aaPredicted RBP30.65■■■□□ 2.5
C2orf49-202ENST00000410049 WRNQ14191 1432 aaPredicted RBP eCLIP30.55■■■□□ 2.48
C2orf49-202ENST00000410049 BIVM-ERCC5R4GMW8 1640 aa30.52■■■□□ 2.48
C2orf49-202ENST00000410049 TOP2BQ02880 1626 aa30.51■■■□□ 2.47
C2orf49-202ENST00000410049 GRIN2AQ12879 1464 aa30.45■■■□□ 2.47
C2orf49-202ENST00000410049 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
C2orf49-202ENST00000410049 NUP160Q12769 1436 aa30.38■■■□□ 2.45
C2orf49-202ENST00000410049 CEP170Q5SW79 1584 aa30.34■■■□□ 2.45
C2orf49-202ENST00000410049 ERICH3Q5RHP9 1530 aa30.34■■■□□ 2.45
C2orf49-202ENST00000410049 FHAD1B1AJZ9 1412 aa30.34■■■□□ 2.45
C2orf49-202ENST00000410049 ERCC6L2Q5T890 1561 aa30.3■■■□□ 2.44
C2orf49-202ENST00000410049 SHROOM2Q13796 1616 aa30.29■■■□□ 2.44
C2orf49-202ENST00000410049 JPH4Q96JJ6 628 aa30.08■■■□□ 2.41
C2orf49-202ENST00000410049 PRG4Q92954 1404 aaPredicted RBP30.06■■■□□ 2.4
C2orf49-202ENST00000410049 RUSC2Q8N2Y8 1516 aa29.98■■■□□ 2.39
C2orf49-202ENST00000410049 KIF13AQ9H1H9 1805 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms