RNA–Protein interactions for RNA: ENST00000409935.5

IMP4-203, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5 BASIC

Gene IMP4, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-203ENST00000409935 NISCHQ9Y2I1 1504 aa42.55■■■■■ 4.4
IMP4-203ENST00000409935 CCDC180Q9P1Z9 1646 aa38.04■■■■□ 3.68
IMP4-203ENST00000409935 ABCC9O60706 1549 aa37.97■■■■□ 3.67
IMP4-203ENST00000409935 RB1CC1Q8TDY2 1594 aa36.19■■■■□ 3.38
IMP4-203ENST00000409935 NACADO15069 1562 aa36.03■■■■□ 3.36
IMP4-203ENST00000409935 DCAF8L2P0C7V8 631 aa35.79■■■■□ 3.32
IMP4-203ENST00000409935 DNAJC5BQ9UF47 199 aa35.7■■■■□ 3.31
IMP4-203ENST00000409935 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
IMP4-203ENST00000409935 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
IMP4-203ENST00000409935 ZCCHC6Q5VYS8 1495 aaKnown RBP35.26■■■■□ 3.23
IMP4-203ENST00000409935 UNC13AQ9UPW8 1703 aa35.25■■■■□ 3.23
IMP4-203ENST00000409935 DCAF1Q9Y4B6 1507 aa35.22■■■■□ 3.23
IMP4-203ENST00000409935 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
IMP4-203ENST00000409935 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
IMP4-203ENST00000409935 SCRIBQ14160 1630 aa34.59■■■■□ 3.13
IMP4-203ENST00000409935 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
IMP4-203ENST00000409935 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
IMP4-203ENST00000409935 CECR2Q9BXF3 1484 aa34.23■■■■□ 3.07
IMP4-203ENST00000409935 NCAPD3P42695 1498 aa33.35■■■□□ 2.93
IMP4-203ENST00000409935 ATAD2BQ9ULI0 1458 aa33.19■■■□□ 2.9
IMP4-203ENST00000409935 SMARCA4P51532 1647 aa33.09■■■□□ 2.89
IMP4-203ENST00000409935 SMARCA2P51531 1590 aa33.06■■■□□ 2.88
IMP4-203ENST00000409935 HMGXB3Q12766 1538 aa33.01■■■□□ 2.87
IMP4-203ENST00000409935 BAZ1AQ9NRL2 1556 aaPredicted RBP32.98■■■□□ 2.87
IMP4-203ENST00000409935 PEG3Q9GZU2 1588 aa32.87■■■□□ 2.85
IMP4-203ENST00000409935 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
IMP4-203ENST00000409935 CUX2O14529 1486 aa32.76■■■□□ 2.84
IMP4-203ENST00000409935 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
IMP4-203ENST00000409935 DNAJC5Q9H3Z4 198 aa32.75■■■□□ 2.83
IMP4-203ENST00000409935 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
IMP4-203ENST00000409935 NESP48681 1621 aa32.66■■■□□ 2.82
IMP4-203ENST00000409935 LAMC3Q9Y6N6 1575 aa32.46■■■□□ 2.79
IMP4-203ENST00000409935 PDS5BQ9NTI5 1447 aa32.33■■■□□ 2.77
IMP4-203ENST00000409935 CADPSQ9ULU8 1353 aa32.31■■■□□ 2.76
IMP4-203ENST00000409935 WIZO95785 1651 aa32.27■■■□□ 2.76
IMP4-203ENST00000409935 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
IMP4-203ENST00000409935 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
IMP4-203ENST00000409935 KIF21AQ7Z4S6 1674 aa32.12■■■□□ 2.73
IMP4-203ENST00000409935 MRC2Q9UBG0 1479 aa31.99■■■□□ 2.71
IMP4-203ENST00000409935 CFTRP13569 1480 aa31.96■■■□□ 2.71
IMP4-203ENST00000409935 TOP2AP11388 1531 aaKnown RBP31.93■■■□□ 2.7
IMP4-203ENST00000409935 WDR62O43379 1518 aa31.91■■■□□ 2.7
IMP4-203ENST00000409935 FANCD2Q9BXW9 1451 aa31.86■■■□□ 2.69
IMP4-203ENST00000409935 CEP164Q9UPV0 1460 aa31.85■■■□□ 2.69
IMP4-203ENST00000409935 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
IMP4-203ENST00000409935 URB2Q14146 1524 aaKnown RBP31.6■■■□□ 2.65
IMP4-203ENST00000409935 PRDM2Q13029 1718 aa31.39■■■□□ 2.62
IMP4-203ENST00000409935 OSCARQ8IYS5 282 aa31.34■■■□□ 2.61
IMP4-203ENST00000409935 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
IMP4-203ENST00000409935 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
IMP4-203ENST00000409935 ABCC8Q09428 1581 aa31.26■■■□□ 2.6
IMP4-203ENST00000409935 ZNF608Q9ULD9 1512 aaPredicted RBP31.19■■■□□ 2.58
IMP4-203ENST00000409935 TRIM41Q8WV44 630 aa31.15■■■□□ 2.58
IMP4-203ENST00000409935 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
IMP4-203ENST00000409935 TARBP1Q13395 1621 aaKnown RBP30.98■■■□□ 2.55
IMP4-203ENST00000409935 POLA1P09884 1462 aaPredicted RBP30.96■■■□□ 2.55
IMP4-203ENST00000409935 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.545e-7■■■■■ 37.2
IMP4-203ENST00000409935 EIF4G3O43432 1585 aaKnown RBP30.92■■■□□ 2.54
IMP4-203ENST00000409935 SOGA1O94964 1423 aa30.86■■■□□ 2.53
IMP4-203ENST00000409935 RAD54L2Q9Y4B4 1467 aa30.82■■■□□ 2.53
IMP4-203ENST00000409935 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
IMP4-203ENST00000409935 RIMBP3CA6NJZ7 1639 aa30.76■■■□□ 2.51
IMP4-203ENST00000409935 RIMBP3BA6NNM3 1639 aa30.76■■■□□ 2.51
IMP4-203ENST00000409935 RIMBP3Q9UFD9 1639 aa30.76■■■□□ 2.51
IMP4-203ENST00000409935 CUX1P39880 1505 aa30.75■■■□□ 2.51
IMP4-203ENST00000409935 FGD5Q6ZNL6 1462 aa30.75■■■□□ 2.51
IMP4-203ENST00000409935 ARHGEF11O15085 1522 aa30.73■■■□□ 2.51
IMP4-203ENST00000409935 SUPT5HO00267 1087 aaKnown RBP30.7■■■□□ 2.51
IMP4-203ENST00000409935 WDR97A6NE52 1622 aa30.68■■■□□ 2.5
IMP4-203ENST00000409935 FBLN2P98095 1184 aa30.65■■■□□ 2.5
IMP4-203ENST00000409935 CHD1O14646 1710 aa30.61■■■□□ 2.49
IMP4-203ENST00000409935 SNAPC4Q5SXM2 1469 aa30.57■■■□□ 2.48
IMP4-203ENST00000409935 GRIN2BQ13224 1484 aa30.56■■■□□ 2.48
IMP4-203ENST00000409935 MAGI1Q96QZ7 1491 aaPredicted RBP30.56■■■□□ 2.48
IMP4-203ENST00000409935 CYB5RLQ6IPT4 315 aa30.54■■■□□ 2.48
IMP4-203ENST00000409935 CHMP7Q8WUX9 453 aaPredicted RBP30.52■■■□□ 2.48
IMP4-203ENST00000409935 ABCA10Q8WWZ4 1543 aa30.47■■■□□ 2.47
IMP4-203ENST00000409935 GAPVD1Q14C86 1478 aa30.45■■■□□ 2.47
IMP4-203ENST00000409935 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
IMP4-203ENST00000409935 ARAP1Q96P48 1450 aa30.44■■■□□ 2.46
IMP4-203ENST00000409935 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
IMP4-203ENST00000409935 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.45
IMP4-203ENST00000409935 SYNJ1O43426 1573 aa30.36■■■□□ 2.45
IMP4-203ENST00000409935 ABCA5Q8WWZ7 1642 aa30.33■■■□□ 2.45
IMP4-203ENST00000409935 TOP2BQ02880 1626 aa30.27■■■□□ 2.44
IMP4-203ENST00000409935 PBRM1Q86U86 1689 aa30.27■■■□□ 2.44
IMP4-203ENST00000409935 BIVM-ERCC5R4GMW8 1640 aa30.23■■■□□ 2.43
IMP4-203ENST00000409935 GRIN2AQ12879 1464 aa30.15■■■□□ 2.42
IMP4-203ENST00000409935 TRHP20396 242 aaPredicted RBP30.11■■■□□ 2.41
IMP4-203ENST00000409935 FHAD1B1AJZ9 1412 aa30.11■■■□□ 2.41
IMP4-203ENST00000409935 NUP160Q12769 1436 aa30.1■■■□□ 2.41
IMP4-203ENST00000409935 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
IMP4-203ENST00000409935 ERICH3Q5RHP9 1530 aa30.06■■■□□ 2.4
IMP4-203ENST00000409935 CEP170Q5SW79 1584 aa29.99■■■□□ 2.39
IMP4-203ENST00000409935 ERCC6L2Q5T890 1561 aa29.91■■■□□ 2.38
IMP4-203ENST00000409935 SHROOM2Q13796 1616 aa29.89■■■□□ 2.37
IMP4-203ENST00000409935 JPH4Q96JJ6 628 aa29.83■■■□□ 2.37
IMP4-203ENST00000409935 IGF1RP08069 1367 aa29.79■■■□□ 2.36
IMP4-203ENST00000409935 PRG4Q92954 1404 aaPredicted RBP29.76■■■□□ 2.35
IMP4-203ENST00000409935 KIF27Q86VH2 1401 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms