RNA–Protein interactions for RNA: ENST00000409861.5

GPD2-204, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 5

Gene GPD2, Length 2,640 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-204ENST00000409861 NISCHQ9Y2I1 1504 aa14.14□□□□□ -0.15
GPD2-204ENST00000409861 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
GPD2-204ENST00000409861 HRCP23327 699 aa12.17□□□□□ -0.46
GPD2-204ENST00000409861 CCDC180Q9P1Z9 1646 aa12.1□□□□□ -0.47
GPD2-204ENST00000409861 ZCCHC6Q5VYS8 1495 aaKnown RBP12.09□□□□□ -0.47
GPD2-204ENST00000409861 DCAF1Q9Y4B6 1507 aa11.99□□□□□ -0.49
GPD2-204ENST00000409861 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
GPD2-204ENST00000409861 MYO15BQ96JP2 1530 aa11.89□□□□□ -0.51
GPD2-204ENST00000409861 SHROOM4Q9ULL8 1493 aa11.86□□□□□ -0.51
GPD2-204ENST00000409861 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
GPD2-204ENST00000409861 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
GPD2-204ENST00000409861 SUPT5HO00267 1087 aaKnown RBP11.81□□□□□ -0.52
GPD2-204ENST00000409861 PCGF6Q9BYE7 350 aa11.71□□□□□ -0.54
GPD2-204ENST00000409861 ZEB1P37275 1124 aaPredicted RBP11.7□□□□□ -0.54
GPD2-204ENST00000409861 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
GPD2-204ENST00000409861 ABCC9O60706 1549 aa11.65□□□□□ -0.55
GPD2-204ENST00000409861 PLPPR3Q6T4P5 718 aa11.63□□□□□ -0.55
GPD2-204ENST00000409861 TRIM26Q12899 539 aaPredicted RBP11.63□□□□□ -0.55
GPD2-204ENST00000409861 MYT1Q01538 1121 aa11.59□□□□□ -0.55
GPD2-204ENST00000409861 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
GPD2-204ENST00000409861 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
GPD2-204ENST00000409861 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
GPD2-204ENST00000409861 DCAF8L2P0C7V8 631 aa11.39□□□□□ -0.59
GPD2-204ENST00000409861 RB1CC1Q8TDY2 1594 aa11.33□□□□□ -0.6
GPD2-204ENST00000409861 SCAF1Q9H7N4 1312 aaKnown RBP11.32□□□□□ -0.6
GPD2-204ENST00000409861 LOC105371045A0A1W2PR82 267 aa11.3□□□□□ -0.6
GPD2-204ENST00000409861 NACADO15069 1562 aa11.28□□□□□ -0.6
GPD2-204ENST00000409861 RSF1Q96T23 1441 aaPredicted RBP11.24□□□□□ -0.61
GPD2-204ENST00000409861 ACIN1Q9UKV3 1341 aaKnown RBP11.2□□□□□ -0.62
GPD2-204ENST00000409861 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
GPD2-204ENST00000409861 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
GPD2-204ENST00000409861 APLP2Q06481 763 aa11.19□□□□□ -0.62
GPD2-204ENST00000409861 CENPBP07199 599 aaPredicted RBP11.17□□□□□ -0.62
GPD2-204ENST00000409861 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
GPD2-204ENST00000409861 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
GPD2-204ENST00000409861 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
GPD2-204ENST00000409861 EIF4G1Q04637 1599 aaKnown RBP11.08□□□□□ -0.64
GPD2-204ENST00000409861 UNC13AQ9UPW8 1703 aa11.07□□□□□ -0.64
GPD2-204ENST00000409861 SCRIBQ14160 1630 aa11.07□□□□□ -0.64
GPD2-204ENST00000409861 KCNA4P22459 653 aa11.07□□□□□ -0.64
GPD2-204ENST00000409861 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
GPD2-204ENST00000409861 NEUROD1Q13562 356 aa11.03□□□□□ -0.64
GPD2-204ENST00000409861 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
GPD2-204ENST00000409861 CLSPNQ9HAW4 1339 aa11□□□□□ -0.65
GPD2-204ENST00000409861 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
GPD2-204ENST00000409861 AEBP2Q6ZN18 517 aaPredicted RBP10.98□□□□□ -0.65
GPD2-204ENST00000409861 EEA1Q15075 1411 aa10.97□□□□□ -0.65
GPD2-204ENST00000409861 CSRNP3Q8WYN3 585 aa10.97□□□□□ -0.65
GPD2-204ENST00000409861 GTF3C3Q9Y5Q9 886 aa10.97□□□□□ -0.65
GPD2-204ENST00000409861 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
GPD2-204ENST00000409861 BICRAQ9NZM4 1560 aa10.94□□□□□ -0.66
GPD2-204ENST00000409861 ARXQ96QS3 562 aa10.94□□□□□ -0.66
GPD2-204ENST00000409861 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
GPD2-204ENST00000409861 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
GPD2-204ENST00000409861 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.66
GPD2-204ENST00000409861 TNIKQ9UKE5 1360 aa10.89□□□□□ -0.67
GPD2-204ENST00000409861 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
GPD2-204ENST00000409861 WIZO95785 1651 aa10.87□□□□□ -0.67
GPD2-204ENST00000409861 TOP2AP11388 1531 aaKnown RBP10.86□□□□□ -0.67
GPD2-204ENST00000409861 CEP162Q5TB80 1403 aa10.85□□□□□ -0.67
GPD2-204ENST00000409861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.85□□□□□ -0.67
GPD2-204ENST00000409861 FAM9AQ8IZU1 332 aaPredicted RBP10.82□□□□□ -0.68
GPD2-204ENST00000409861 CECR2Q9BXF3 1484 aa10.82□□□□□ -0.68
GPD2-204ENST00000409861 GOLGA3Q08378 1498 aa10.78□□□□□ -0.68
GPD2-204ENST00000409861 KIF21BO75037 1637 aa10.78□□□□□ -0.68
GPD2-204ENST00000409861 PHF23Q9BUL5 403 aaPredicted RBP10.76□□□□□ -0.69
GPD2-204ENST00000409861 SMARCA2P51531 1590 aa10.75□□□□□ -0.69
GPD2-204ENST00000409861 TULP1O00294 542 aaPredicted RBP10.73□□□□□ -0.69
GPD2-204ENST00000409861 SMARCA4P51532 1647 aa10.73□□□□□ -0.69
GPD2-204ENST00000409861 BAZ1BQ9UIG0 1483 aaKnown RBP10.73□□□□□ -0.69
GPD2-204ENST00000409861 CCDC88BA6NC98 1476 aa10.71□□□□□ -0.69
GPD2-204ENST00000409861 CEP164Q9UPV0 1460 aa10.7□□□□□ -0.7
GPD2-204ENST00000409861 TAOK2Q9UL54 1235 aa10.69□□□□□ -0.7
GPD2-204ENST00000409861 ABCC8Q09428 1581 aa10.68□□□□□ -0.7
GPD2-204ENST00000409861 VPS8Q8N3P4 1428 aa10.65□□□□□ -0.7
GPD2-204ENST00000409861 RANGAP1P46060 587 aaPredicted RBP10.65□□□□□ -0.71
GPD2-204ENST00000409861 PEG3Q9GZU2 1588 aa10.64□□□□□ -0.71
GPD2-204ENST00000409861 MIER1Q8N108 512 aa10.63□□□□□ -0.71
GPD2-204ENST00000409861 SOGA1O94964 1423 aa10.62□□□□□ -0.71
GPD2-204ENST00000409861 CUX2O14529 1486 aa10.6□□□□□ -0.71
GPD2-204ENST00000409861 HOMEZQ8IX15 550 aa10.59□□□□□ -0.71
GPD2-204ENST00000409861 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
GPD2-204ENST00000409861 CLIP1P30622 1438 aa10.58□□□□□ -0.72
GPD2-204ENST00000409861 ERICH3Q5RHP9 1530 aa10.56□□□□□ -0.72
GPD2-204ENST00000409861 ANP32EQ9BTT0 268 aa10.55□□□□□ -0.72
GPD2-204ENST00000409861 SUPT16HQ9Y5B9 1047 aaKnown RBP10.55□□□□□ -0.72
GPD2-204ENST00000409861 CC2D2AQ9P2K1 1620 aa10.54□□□□□ -0.72
GPD2-204ENST00000409861 YTHDC1Q96MU7 727 aaKnown RBP10.54□□□□□ -0.72
GPD2-204ENST00000409861 DNAJC5BQ9UF47 199 aa10.53□□□□□ -0.72
GPD2-204ENST00000409861 EIF5BO60841 1220 aaKnown RBP10.52□□□□□ -0.73
GPD2-204ENST00000409861 TPRNQ4KMQ1 711 aa10.52□□□□□ -0.73
GPD2-204ENST00000409861 DHX57Q6P158 1386 aaKnown RBP10.51□□□□□ -0.73
GPD2-204ENST00000409861 RUSC2Q8N2Y8 1516 aa10.51□□□□□ -0.73
GPD2-204ENST00000409861 SYNJ1O43426 1573 aa10.5□□□□□ -0.73
GPD2-204ENST00000409861 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
GPD2-204ENST00000409861 RRBP1Q9P2E9 1410 aaKnown RBP10.5□□□□□ -0.73
GPD2-204ENST00000409861 BCANQ96GW7 911 aa10.48□□□□□ -0.73
GPD2-204ENST00000409861 BIVM-ERCC5R4GMW8 1640 aa10.48□□□□□ -0.73
GPD2-204ENST00000409861 ATAD2BQ9ULI0 1458 aa10.47□□□□□ -0.73
GPD2-204ENST00000409861 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms