RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 NISCHQ9Y2I1 1504 aa41.49■■■■■ 4.23
PDE6D-202ENST00000409772 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
PDE6D-202ENST00000409772 ABCC9O60706 1549 aa36.27■■■■□ 3.4
PDE6D-202ENST00000409772 RB1CC1Q8TDY2 1594 aa34.89■■■■□ 3.18
PDE6D-202ENST00000409772 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
PDE6D-202ENST00000409772 NACADO15069 1562 aa34.83■■■■□ 3.17
PDE6D-202ENST00000409772 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
PDE6D-202ENST00000409772 ZCCHC6Q5VYS8 1495 aaKnown RBP34.49■■■■□ 3.11
PDE6D-202ENST00000409772 DCAF1Q9Y4B6 1507 aa34.37■■■■□ 3.09
PDE6D-202ENST00000409772 UNC13AQ9UPW8 1703 aa33.92■■■■□ 3.02
PDE6D-202ENST00000409772 PABPN1Q86U42 306 aaKnown RBP eCLIP33.91■■■■□ 3.02
PDE6D-202ENST00000409772 BICRAQ9NZM4 1560 aa33.71■■■□□ 2.99
PDE6D-202ENST00000409772 SCRIBQ14160 1630 aa33.61■■■□□ 2.97
PDE6D-202ENST00000409772 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.96
PDE6D-202ENST00000409772 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
PDE6D-202ENST00000409772 EIF4G1Q04637 1599 aaKnown RBP32.89■■■□□ 2.86
PDE6D-202ENST00000409772 CC2D2AQ9P2K1 1620 aa32.79■■■□□ 2.84
PDE6D-202ENST00000409772 CECR2Q9BXF3 1484 aa32.65■■■□□ 2.82
PDE6D-202ENST00000409772 BAZ1AQ9NRL2 1556 aaPredicted RBP32.2■■■□□ 2.75
PDE6D-202ENST00000409772 SMARCA4P51532 1647 aa32.18■■■□□ 2.74
PDE6D-202ENST00000409772 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
PDE6D-202ENST00000409772 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
PDE6D-202ENST00000409772 SMARCA2P51531 1590 aa32.09■■■□□ 2.73
PDE6D-202ENST00000409772 HMGXB3Q12766 1538 aa31.92■■■□□ 2.7
PDE6D-202ENST00000409772 MROH2BQ7Z745 1585 aa31.91■■■□□ 2.7
PDE6D-202ENST00000409772 PEG3Q9GZU2 1588 aa31.9■■■□□ 2.7
PDE6D-202ENST00000409772 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
PDE6D-202ENST00000409772 RSF1Q96T23 1441 aaPredicted RBP31.56■■■□□ 2.64
PDE6D-202ENST00000409772 WIZO95785 1651 aa31.54■■■□□ 2.64
PDE6D-202ENST00000409772 ERCC6Q03468 1493 aa31.35■■■□□ 2.61
PDE6D-202ENST00000409772 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
PDE6D-202ENST00000409772 NESP48681 1621 aa31.29■■■□□ 2.6
PDE6D-202ENST00000409772 TOP2AP11388 1531 aaKnown RBP31.25■■■□□ 2.59
PDE6D-202ENST00000409772 CADPSQ9ULU8 1353 aa31.23■■■□□ 2.59
PDE6D-202ENST00000409772 PDS5BQ9NTI5 1447 aa31.18■■■□□ 2.58
PDE6D-202ENST00000409772 CUX2O14529 1486 aa31.08■■■□□ 2.57
PDE6D-202ENST00000409772 DNAJC5Q9H3Z4 198 aa30.97■■■□□ 2.55
PDE6D-202ENST00000409772 CFTRP13569 1480 aa30.96■■■□□ 2.55
PDE6D-202ENST00000409772 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
PDE6D-202ENST00000409772 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
PDE6D-202ENST00000409772 THOC2Q8NI27 1593 aaKnown RBP30.83■■■□□ 2.53
PDE6D-202ENST00000409772 FANCD2Q9BXW9 1451 aa30.81■■■□□ 2.52
PDE6D-202ENST00000409772 CEP164Q9UPV0 1460 aa30.8■■■□□ 2.52
PDE6D-202ENST00000409772 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
PDE6D-202ENST00000409772 SUPT5HO00267 1087 aaKnown RBP30.74■■■□□ 2.51
PDE6D-202ENST00000409772 WDR62O43379 1518 aa30.63■■■□□ 2.49
PDE6D-202ENST00000409772 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
PDE6D-202ENST00000409772 URB2Q14146 1524 aaKnown RBP30.45■■■□□ 2.47
PDE6D-202ENST00000409772 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
PDE6D-202ENST00000409772 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
PDE6D-202ENST00000409772 DNMBPQ6XZF7 1577 aa30.23■■■□□ 2.43
PDE6D-202ENST00000409772 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
PDE6D-202ENST00000409772 POLA1P09884 1462 aaPredicted RBP30■■■□□ 2.39
PDE6D-202ENST00000409772 SOGA1O94964 1423 aa29.97■■■□□ 2.39
PDE6D-202ENST00000409772 CUX1P39880 1505 aa29.95■■■□□ 2.38
PDE6D-202ENST00000409772 ZNF608Q9ULD9 1512 aaPredicted RBP29.95■■■□□ 2.38
PDE6D-202ENST00000409772 TARBP1Q13395 1621 aaKnown RBP29.92■■■□□ 2.38
PDE6D-202ENST00000409772 FGD5Q6ZNL6 1462 aa29.91■■■□□ 2.38
PDE6D-202ENST00000409772 OSCARQ8IYS5 282 aa29.88■■■□□ 2.37
PDE6D-202ENST00000409772 RAD54L2Q9Y4B4 1467 aa29.86■■■□□ 2.37
PDE6D-202ENST00000409772 AQRO60306 1485 aaKnown RBP eCLIP29.83■■■□□ 2.37
PDE6D-202ENST00000409772 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
PDE6D-202ENST00000409772 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
PDE6D-202ENST00000409772 WDR97A6NE52 1622 aa29.78■■■□□ 2.36
PDE6D-202ENST00000409772 TDRD9Q8NDG6 1382 aaKnown RBP29.77■■■□□ 2.36
PDE6D-202ENST00000409772 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
PDE6D-202ENST00000409772 BIVM-ERCC5R4GMW8 1640 aa29.66■■■□□ 2.34
PDE6D-202ENST00000409772 ABCA10Q8WWZ4 1543 aa29.65■■■□□ 2.34
PDE6D-202ENST00000409772 FBLN2P98095 1184 aa29.62■■■□□ 2.33
PDE6D-202ENST00000409772 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
PDE6D-202ENST00000409772 SYNJ1O43426 1573 aa29.6■■■□□ 2.33
PDE6D-202ENST00000409772 GAPVD1Q14C86 1478 aa29.59■■■□□ 2.33
PDE6D-202ENST00000409772 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
PDE6D-202ENST00000409772 CHMP7Q8WUX9 453 aaPredicted RBP29.54■■■□□ 2.32
PDE6D-202ENST00000409772 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.31
PDE6D-202ENST00000409772 ABCA5Q8WWZ7 1642 aa29.46■■■□□ 2.31
PDE6D-202ENST00000409772 CHD1O14646 1710 aa29.44■■■□□ 2.3
PDE6D-202ENST00000409772 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
PDE6D-202ENST00000409772 PBRM1Q86U86 1689 aa29.41■■■□□ 2.3
PDE6D-202ENST00000409772 TRIM41Q8WV44 630 aa29.37■■■□□ 2.29
PDE6D-202ENST00000409772 ERICH3Q5RHP9 1530 aa29.31■■■□□ 2.28
PDE6D-202ENST00000409772 FHAD1B1AJZ9 1412 aa29.27■■■□□ 2.28
PDE6D-202ENST00000409772 KIF27Q86VH2 1401 aa29.24■■■□□ 2.27
PDE6D-202ENST00000409772 ARHGEF11O15085 1522 aa29.21■■■□□ 2.27
PDE6D-202ENST00000409772 RIMBP3CA6NJZ7 1639 aa29.2■■■□□ 2.26
PDE6D-202ENST00000409772 RIMBP3BA6NNM3 1639 aa29.2■■■□□ 2.26
PDE6D-202ENST00000409772 RIMBP3Q9UFD9 1639 aa29.2■■■□□ 2.26
PDE6D-202ENST00000409772 GRIN2AQ12879 1464 aa29.19■■■□□ 2.26
PDE6D-202ENST00000409772 ADAMTS12P58397 1594 aa29.18■■■□□ 2.26
PDE6D-202ENST00000409772 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
PDE6D-202ENST00000409772 IGF1RP08069 1367 aa29.12■■■□□ 2.25
PDE6D-202ENST00000409772 CYB5RLQ6IPT4 315 aa29.08■■■□□ 2.25
PDE6D-202ENST00000409772 NUP160Q12769 1436 aa29.06■■■□□ 2.24
PDE6D-202ENST00000409772 CUL7Q14999 1698 aa28.99■■■□□ 2.23
PDE6D-202ENST00000409772 CEP170Q5SW79 1584 aa28.97■■■□□ 2.23
PDE6D-202ENST00000409772 CARMIL1Q5VZK9 1371 aa28.96■■■□□ 2.23
PDE6D-202ENST00000409772 ARAP1Q96P48 1450 aa28.93■■■□□ 2.22
PDE6D-202ENST00000409772 JPH4Q96JJ6 628 aa28.89■■■□□ 2.22
PDE6D-202ENST00000409772 SHROOM2Q13796 1616 aa28.81■■■□□ 2.2
PDE6D-202ENST00000409772 KIAA0586Q9BVV6 1533 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms