RNA–Protein interactions for RNA: ENST00000409422.5

ATG9A-204, Transcript of autophagy related 9A, humanhuman

TSL 5 BASIC

Gene ATG9A, Length 2,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-204ENST00000409422 NISCHQ9Y2I1 1504 aa31.15■■■□□ 2.58
ATG9A-204ENST00000409422 CCDC180Q9P1Z9 1646 aa27.51■■□□□ 1.99
ATG9A-204ENST00000409422 ABCC9O60706 1549 aa26.26■■□□□ 1.79
ATG9A-204ENST00000409422 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
ATG9A-204ENST00000409422 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
ATG9A-204ENST00000409422 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
ATG9A-204ENST00000409422 NACADO15069 1562 aa25.65■■□□□ 1.7
ATG9A-204ENST00000409422 DCAF8L2P0C7V8 631 aa25.59■■□□□ 1.69
ATG9A-204ENST00000409422 RB1CC1Q8TDY2 1594 aa25.53■■□□□ 1.68
ATG9A-204ENST00000409422 SHROOM4Q9ULL8 1493 aa25.23■■□□□ 1.63
ATG9A-204ENST00000409422 UNC13AQ9UPW8 1703 aa25.14■■□□□ 1.62
ATG9A-204ENST00000409422 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
ATG9A-204ENST00000409422 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
ATG9A-204ENST00000409422 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
ATG9A-204ENST00000409422 PABPN1Q86U42 306 aaKnown RBP eCLIP24.58■■□□□ 1.52
ATG9A-204ENST00000409422 CECR2Q9BXF3 1484 aa24.22■■□□□ 1.47
ATG9A-204ENST00000409422 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
ATG9A-204ENST00000409422 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
ATG9A-204ENST00000409422 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
ATG9A-204ENST00000409422 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.44
ATG9A-204ENST00000409422 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
ATG9A-204ENST00000409422 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
ATG9A-204ENST00000409422 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
ATG9A-204ENST00000409422 WIZO95785 1651 aa23.85■■□□□ 1.41
ATG9A-204ENST00000409422 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
ATG9A-204ENST00000409422 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
ATG9A-204ENST00000409422 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
ATG9A-204ENST00000409422 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
ATG9A-204ENST00000409422 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
ATG9A-204ENST00000409422 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
ATG9A-204ENST00000409422 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
ATG9A-204ENST00000409422 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
ATG9A-204ENST00000409422 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
ATG9A-204ENST00000409422 HRCP23327 699 aa23.3■■□□□ 1.32
ATG9A-204ENST00000409422 PCGF6Q9BYE7 350 aa23.3■■□□□ 1.32
ATG9A-204ENST00000409422 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
ATG9A-204ENST00000409422 TRIM41Q8WV44 630 aa23.02■■□□□ 1.27
ATG9A-204ENST00000409422 PRDM2Q13029 1718 aa23.01■■□□□ 1.27
ATG9A-204ENST00000409422 CFTRP13569 1480 aa22.98■■□□□ 1.27
ATG9A-204ENST00000409422 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
ATG9A-204ENST00000409422 NESP48681 1621 aa22.94■■□□□ 1.26
ATG9A-204ENST00000409422 CADPSQ9ULU8 1353 aa22.94■■□□□ 1.26
ATG9A-204ENST00000409422 PPARGC1BQ86YN6 1023 aaKnown RBP22.87■■□□□ 1.25
ATG9A-204ENST00000409422 FAM9AQ8IZU1 332 aaPredicted RBP22.84■■□□□ 1.25
ATG9A-204ENST00000409422 TRIM26Q12899 539 aaPredicted RBP22.83■■□□□ 1.25
ATG9A-204ENST00000409422 KIF21AQ7Z4S6 1674 aa22.77■■□□□ 1.24
ATG9A-204ENST00000409422 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
ATG9A-204ENST00000409422 PDS5BQ9NTI5 1447 aa22.68■■□□□ 1.22
ATG9A-204ENST00000409422 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
ATG9A-204ENST00000409422 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
ATG9A-204ENST00000409422 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
ATG9A-204ENST00000409422 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
ATG9A-204ENST00000409422 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
ATG9A-204ENST00000409422 THOC2Q8NI27 1593 aaKnown RBP22.53■■□□□ 1.2
ATG9A-204ENST00000409422 CUX1P39880 1505 aa22.53■■□□□ 1.2
ATG9A-204ENST00000409422 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
ATG9A-204ENST00000409422 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
ATG9A-204ENST00000409422 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
ATG9A-204ENST00000409422 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
ATG9A-204ENST00000409422 DNMBPQ6XZF7 1577 aa22.49■■□□□ 1.19
ATG9A-204ENST00000409422 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
ATG9A-204ENST00000409422 WDR62O43379 1518 aa22.45■■□□□ 1.18
ATG9A-204ENST00000409422 TOPBP1Q92547 1522 aa22.45■■□□□ 1.18
ATG9A-204ENST00000409422 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
ATG9A-204ENST00000409422 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
ATG9A-204ENST00000409422 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
ATG9A-204ENST00000409422 WDR97A6NE52 1622 aa22.24■■□□□ 1.15
ATG9A-204ENST00000409422 CUX2O14529 1486 aa22.23■■□□□ 1.15
ATG9A-204ENST00000409422 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
ATG9A-204ENST00000409422 SOGA1O94964 1423 aa22.21■■□□□ 1.15
ATG9A-204ENST00000409422 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
ATG9A-204ENST00000409422 ABCA10Q8WWZ4 1543 aa22.13■■□□□ 1.13
ATG9A-204ENST00000409422 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
ATG9A-204ENST00000409422 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
ATG9A-204ENST00000409422 ABCA5Q8WWZ7 1642 aa22.07■■□□□ 1.12
ATG9A-204ENST00000409422 CEP162Q5TB80 1403 aa22.05■■□□□ 1.12
ATG9A-204ENST00000409422 CSRNP3Q8WYN3 585 aa22.03■■□□□ 1.12
ATG9A-204ENST00000409422 TNIKQ9UKE5 1360 aa22.02■■□□□ 1.12
ATG9A-204ENST00000409422 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
ATG9A-204ENST00000409422 EIF4G3O43432 1585 aaKnown RBP22.01■■□□□ 1.11
ATG9A-204ENST00000409422 EEA1Q15075 1411 aa21.99■■□□□ 1.11
ATG9A-204ENST00000409422 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
ATG9A-204ENST00000409422 PBRM1Q86U86 1689 aa21.97■■□□□ 1.11
ATG9A-204ENST00000409422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
ATG9A-204ENST00000409422 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
ATG9A-204ENST00000409422 GAPVD1Q14C86 1478 aa21.93■■□□□ 1.1
ATG9A-204ENST00000409422 AQRO60306 1485 aaKnown RBP eCLIP21.92■■□□□ 1.11e-7■■■■■ 36.4
ATG9A-204ENST00000409422 TTBK1Q5TCY1 1321 aaPredicted RBP21.91■■□□□ 1.1
ATG9A-204ENST00000409422 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
ATG9A-204ENST00000409422 ERICH3Q5RHP9 1530 aa21.88■■□□□ 1.09
ATG9A-204ENST00000409422 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
ATG9A-204ENST00000409422 CCER1Q8TC90 406 aaPredicted RBP21.84■■□□□ 1.09
ATG9A-204ENST00000409422 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
ATG9A-204ENST00000409422 IGF1RP08069 1367 aa21.83■■□□□ 1.08
ATG9A-204ENST00000409422 CUL7Q14999 1698 aa21.83■■□□□ 1.08
ATG9A-204ENST00000409422 ADAMTS12P58397 1594 aa21.8■■□□□ 1.08
ATG9A-204ENST00000409422 KIF21BO75037 1637 aa21.78■■□□□ 1.08
ATG9A-204ENST00000409422 SNAPC4Q5SXM2 1469 aa21.77■■□□□ 1.08
ATG9A-204ENST00000409422 PRXQ9BXM0 1461 aa21.77■■□□□ 1.08
ATG9A-204ENST00000409422 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms